RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 ZFHX3Q15911 3703 aa12.52□□□□□ -0.4
SCNN1A-221ENST00000543768 LINC01548A6NM66 108 aa12.52□□□□□ -0.41
SCNN1A-221ENST00000543768 RPL7P18124 248 aaKnown RBP12.52□□□□□ -0.41
SCNN1A-221ENST00000543768 C15orf32Q32M92 178 aa12.52□□□□□ -0.41
SCNN1A-221ENST00000543768 ZNF502Q8TBZ5 544 aa12.52□□□□□ -0.41
SCNN1A-221ENST00000543768 RABAC1Q9UI14 185 aa12.52□□□□□ -0.41
SCNN1A-221ENST00000543768 SMAD5-AS1Q9Y6J3 95 aa12.52□□□□□ -0.41
SCNN1A-221ENST00000543768 PIEZO1Q92508 2521 aa12.52□□□□□ -0.41
SCNN1A-221ENST00000543768 HAX1O00165 279 aa12.51□□□□□ -0.41
SCNN1A-221ENST00000543768 SCGB2A1O75556 95 aa12.51□□□□□ -0.41
SCNN1A-221ENST00000543768 NTF3P20783 257 aa12.51□□□□□ -0.41
SCNN1A-221ENST00000543768 PSG9Q00887 426 aa12.51□□□□□ -0.41
SCNN1A-221ENST00000543768 URB1-AS1Q96HZ7 61 aa12.51□□□□□ -0.41
SCNN1A-221ENST00000543768 C8orf49Q96NF6 230 aa12.51□□□□□ -0.41
SCNN1A-221ENST00000543768 ABCA2Q9BZC7 2435 aa12.51□□□□□ -0.41
SCNN1A-221ENST00000543768 IGHV3-35A0A0C4DH35 117 aa12.5□□□□□ -0.41
SCNN1A-221ENST00000543768 SH2D7A6NKC9 451 aaPredicted RBP12.5□□□□□ -0.41
SCNN1A-221ENST00000543768 GPR183P32249 361 aa12.5□□□□□ -0.41
SCNN1A-221ENST00000543768 RHOGP84095 191 aa12.5□□□□□ -0.41
SCNN1A-221ENST00000543768 PAX8Q06710 450 aa12.5□□□□□ -0.41
SCNN1A-221ENST00000543768 OR4C5Q8NGB2 326 aa12.5□□□□□ -0.41
SCNN1A-221ENST00000543768 VPS13CQ709C8 3753 aa12.5□□□□□ -0.41
SCNN1A-221ENST00000543768 IGHV3OR16-8A0A075B7F1 116 aa12.5□□□□□ -0.41
SCNN1A-221ENST00000543768 G3V318 75 aa12.5□□□□□ -0.41
SCNN1A-221ENST00000543768 PPBPP02775 128 aa12.5□□□□□ -0.41
SCNN1A-221ENST00000543768 PMCHL1Q16048 86 aa12.5□□□□□ -0.41
SCNN1A-221ENST00000543768 BORCS7Q96B45 105 aa12.5□□□□□ -0.41
SCNN1A-221ENST00000543768 PKD1L2Q7Z442 2459 aa12.5□□□□□ -0.41
SCNN1A-221ENST00000543768 HSBP1O75506 76 aa12.49□□□□□ -0.41
SCNN1A-221ENST00000543768 CSN1S1P47710 185 aa12.49□□□□□ -0.41
SCNN1A-221ENST00000543768 RNF151Q2KHN1 245 aa12.49□□□□□ -0.41
SCNN1A-221ENST00000543768 SERTM2A0A1B0GWG4 89 aa12.49□□□□□ -0.41
SCNN1A-221ENST00000543768 IGHG4P01861 327 aa12.49□□□□□ -0.41
SCNN1A-221ENST00000543768 CLEC3BP05452 202 aa12.49□□□□□ -0.41
SCNN1A-221ENST00000543768 C5orf56Q8N8D9 126 aa12.49□□□□□ -0.41
SCNN1A-221ENST00000543768 ZFAND3Q9H8U3 227 aa12.49□□□□□ -0.41
SCNN1A-221ENST00000543768 CACNA1BQ00975 2339 aa12.49□□□□□ -0.41
SCNN1A-221ENST00000543768 RNASEKQ6P5S7 137 aaKnown RBP12.48□□□□□ -0.41
SCNN1A-221ENST00000543768 ATOH7Q8N100 152 aa12.48□□□□□ -0.41
SCNN1A-221ENST00000543768 IGKV2-40A0A087WW87 121 aaPredicted RBP12.48□□□□□ -0.41
SCNN1A-221ENST00000543768 LOC102724200A0A096LPH7 203 aaPredicted RBP12.48□□□□□ -0.41
SCNN1A-221ENST00000543768 A0A1B0GUT8 65 aa12.48□□□□□ -0.41
SCNN1A-221ENST00000543768 CHEK1O14757 476 aa12.48□□□□□ -0.41
SCNN1A-221ENST00000543768 IGKV2D-40P01614 121 aaPredicted RBP12.48□□□□□ -0.41
SCNN1A-221ENST00000543768 ARMS2P0C7Q2 107 aa12.48□□□□□ -0.41
SCNN1A-221ENST00000543768 MAJINQ3KP22 176 aa12.48□□□□□ -0.41
SCNN1A-221ENST00000543768 CCDC140Q96MF4 163 aa12.48□□□□□ -0.41
SCNN1A-221ENST00000543768 NDFIP1Q9BT67 221 aa12.48□□□□□ -0.41
SCNN1A-221ENST00000543768 IGHV3OR16-10A0A075B7F0 116 aa12.47□□□□□ -0.41
SCNN1A-221ENST00000543768 IGHV4-61A0A0C4DH41 118 aa12.47□□□□□ -0.41
SCNN1A-221ENST00000543768 M0R2Z0 102 aa12.47□□□□□ -0.41
SCNN1A-221ENST00000543768 IGFL4Q6B9Z1 124 aa12.47□□□□□ -0.41
SCNN1A-221ENST00000543768 COX8CQ7Z4L0 72 aa12.47□□□□□ -0.41
SCNN1A-221ENST00000543768 TRAV9-2A0A087WT02 112 aa12.46□□□□□ -0.41
SCNN1A-221ENST00000543768 M0QZ24 198 aa12.46□□□□□ -0.41
SCNN1A-221ENST00000543768 CT45A10P0DMU9 189 aa12.46□□□□□ -0.41
SCNN1A-221ENST00000543768 HLA-DMBP28068 263 aa12.46□□□□□ -0.41
SCNN1A-221ENST00000543768 TMEM219Q86XT9 240 aa12.46□□□□□ -0.41
SCNN1A-221ENST00000543768 PIFOQ8TCI5 191 aa12.46□□□□□ -0.41
SCNN1A-221ENST00000543768 FAM181BA6NEQ2 426 aa12.45□□□□□ -0.42
SCNN1A-221ENST00000543768 BUB3O43684 328 aa12.45□□□□□ -0.42
SCNN1A-221ENST00000543768 LCN12Q6JVE5 192 aa12.45□□□□□ -0.42
SCNN1A-221ENST00000543768 EBLN2Q6P2I7 272 aa12.45□□□□□ -0.42
SCNN1A-221ENST00000543768 CLEC19AQ6UXS0 136 aa12.45□□□□□ -0.42
SCNN1A-221ENST00000543768 GATD1Q8NB37 220 aa12.45□□□□□ -0.42
SCNN1A-221ENST00000543768 PRR25Q96S07 402 aa12.45□□□□□ -0.42
SCNN1A-221ENST00000543768 IGHV1-69DA0A0B4J2H0 117 aa12.45□□□□□ -0.42
SCNN1A-221ENST00000543768 CLPSL1A2RUU4 121 aa12.45□□□□□ -0.42
SCNN1A-221ENST00000543768 IGHV1-69P01742 117 aa12.45□□□□□ -0.42
SCNN1A-221ENST00000543768 RIGQ13278 110 aa12.45□□□□□ -0.42
SCNN1A-221ENST00000543768 SMIM15Q7Z3B0 74 aa12.45□□□□□ -0.42
SCNN1A-221ENST00000543768 PIMREGQ9BSJ6 248 aa12.45□□□□□ -0.42
SCNN1A-221ENST00000543768 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.44□□□□□ -0.42
SCNN1A-221ENST00000543768 S100A7P31151 101 aa12.44□□□□□ -0.42
SCNN1A-221ENST00000543768 VAMP3Q15836 100 aa12.44□□□□□ -0.42
SCNN1A-221ENST00000543768 FAM162BQ5T6X4 162 aa12.44□□□□□ -0.42
SCNN1A-221ENST00000543768 C10orf105Q8TEF2 133 aa12.44□□□□□ -0.42
SCNN1A-221ENST00000543768 CCL19Q99731 98 aa12.44□□□□□ -0.42
SCNN1A-221ENST00000543768 VGLL1Q99990 258 aa12.44□□□□□ -0.42
SCNN1A-221ENST00000543768 SPTAN1Q13813 2472 aaKnown RBP12.44□□□□□ -0.42
SCNN1A-221ENST00000543768 C2orf70A6NJV1 201 aa12.44□□□□□ -0.42
SCNN1A-221ENST00000543768 SH2D1AO60880 128 aa12.44□□□□□ -0.42
SCNN1A-221ENST00000543768 RPS20P60866 119 aaKnown RBP12.44□□□□□ -0.42
SCNN1A-221ENST00000543768 BRD3OSQ6XYD6 125 aa12.44□□□□□ -0.42
SCNN1A-221ENST00000543768 CELSR1Q9NYQ6 3014 aa12.44□□□□□ -0.42
SCNN1A-221ENST00000543768 CACNA1AO00555 2505 aa12.43□□□□□ -0.42
SCNN1A-221ENST00000543768 GOSR1O95249 250 aa12.43□□□□□ -0.42
SCNN1A-221ENST00000543768 Q6AWC8 147 aa12.43□□□□□ -0.42
SCNN1A-221ENST00000543768 EEF1AKMT3Q96AZ1 226 aa12.43□□□□□ -0.42
SCNN1A-221ENST00000543768 CHCHD1Q96BP2 118 aaKnown RBP12.43□□□□□ -0.42
SCNN1A-221ENST00000543768 MOB4Q9Y3A3 225 aa12.43□□□□□ -0.42
SCNN1A-221ENST00000543768 COL12A1Q99715 3063 aa12.43□□□□□ -0.42
SCNN1A-221ENST00000543768 A0A087X0K7 114 aa12.43□□□□□ -0.42
SCNN1A-221ENST00000543768 TRAV40A0A0B4J280 105 aa12.43□□□□□ -0.42
SCNN1A-221ENST00000543768 FBLL1A6NHQ2 334 aaKnown RBP12.43□□□□□ -0.42
SCNN1A-221ENST00000543768 IGLL1P15814 213 aa12.43□□□□□ -0.42
SCNN1A-221ENST00000543768 RAB9AP51151 201 aa12.43□□□□□ -0.42
SCNN1A-221ENST00000543768 C19orf54Q5BKX5 351 aa12.43□□□□□ -0.42
SCNN1A-221ENST00000543768 Q8TAT8 98 aa12.43□□□□□ -0.42
SCNN1A-221ENST00000543768 CFAP46Q8IYW2 2715 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms