RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 HIST1H2BOP23527 126 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 HIST1H2BBP33778 126 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 HIST1H2BDP58876 126 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 HIST1H2BCP62807 126 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 HIST2H2BEQ16778 126 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.98□□□□□ -1.13
TOP3A-208ENST00000542570 PATE2Q6UY27 113 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 OR11H1Q8NG94 326 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 HIST1H2BHQ93079 126 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 HIST1H2BNQ99877 126 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 HIST1H2BMQ99879 126 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 A0A1B0GUT8 65 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 K7EIM0 57 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 ADMP35318 185 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 RAB9AP51151 201 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 PRR20EP86478 221 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 PRR20CP86479 221 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 PRR20DP86480 221 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 PRR20BP86481 221 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 PRR20AP86496 221 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 ZNF56Q15929 161 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 KLHDC1Q8N7A1 406 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 LINC00477Q96M19 166 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 C8orf49Q96NF6 230 aa7.98□□□□□ -1.13
TOP3A-208ENST00000542570 CXorf65A6NEN9 183 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 TRBV12-3P01733 135 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 HLA-DQA1P01909 254 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 HTN3P15516 51 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 RPL35AP18077 110 aaKnown RBP7.97□□□□□ -1.13
TOP3A-208ENST00000542570 TAS2R60P59551 318 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 HBBP68871 147 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 TMEM183BQ1AE95 376 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 TMEM183AQ8IXX5 376 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 FAM110DQ8TAY7 271 aaPredicted RBP7.97□□□□□ -1.13
TOP3A-208ENST00000542570 LINC01587Q99440 93 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 MCRIP2Q9BUT9 160 aaKnown RBP7.97□□□□□ -1.13
TOP3A-208ENST00000542570 SIRPDQ9H106 197 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 CBY3A6NI87 242 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 FABP5P3A8MUU1 101 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 LINC00518Q8N0U6 118 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 SHANK2-AS3Q9BTD1 123 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 TRAV12-2A0A075B6T6 113 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 SNAI2O43623 268 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 TOMM40O96008 361 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 FER1L6-AS1Q8NA97 138 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 DIRC3C9JPN6 131 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 C11orf71Q6IPW1 123 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 TMEM256Q8N2U0 113 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 FMC1Q96HJ9 113 aa7.97□□□□□ -1.13
TOP3A-208ENST00000542570 SMKR1H3BMG3 65 aa7.96□□□□□ -1.13
TOP3A-208ENST00000542570 SERF1AO75920 110 aa7.96□□□□□ -1.13
TOP3A-208ENST00000542570 TEX22C9J3V5 150 aa7.96□□□□□ -1.14
TOP3A-208ENST00000542570 DEFB131AP59861 70 aa7.96□□□□□ -1.14
TOP3A-208ENST00000542570 FAM162BQ5T6X4 162 aa7.96□□□□□ -1.14
TOP3A-208ENST00000542570 RAX2Q96IS3 184 aa7.96□□□□□ -1.14
TOP3A-208ENST00000542570 ZNF256Q9Y2P7 627 aaPredicted RBP7.96□□□□□ -1.14
TOP3A-208ENST00000542570 LSM4Q9Y4Z0 139 aaKnown RBP7.96□□□□□ -1.14
TOP3A-208ENST00000542570 KLF2Q9Y5W3 355 aaPredicted RBP7.96□□□□□ -1.14
TOP3A-208ENST00000542570 TRBV7-1A0A0A6YYK4 115 aa7.96□□□□□ -1.14
TOP3A-208ENST00000542570 AVPP01185 164 aa7.96□□□□□ -1.14
TOP3A-208ENST00000542570 Q6ZS46 218 aa7.96□□□□□ -1.14
TOP3A-208ENST00000542570 VGLL1Q99990 258 aa7.96□□□□□ -1.14
TOP3A-208ENST00000542570 KMT2EQ8IZD2 1858 aa7.95□□□□□ -1.14
TOP3A-208ENST00000542570 CTAG1AP78358 180 aa7.95□□□□□ -1.14
TOP3A-208ENST00000542570 SMR3AQ99954 134 aa7.95□□□□□ -1.14
TOP3A-208ENST00000542570 CDC42EP3Q9UKI2 254 aa7.95□□□□□ -1.14
TOP3A-208ENST00000542570 GOLT1BQ9Y3E0 138 aa7.95□□□□□ -1.14
TOP3A-208ENST00000542570 TUBA4BQ9H853 241 aa7.95□□□□□ -1.14
TOP3A-208ENST00000542570 SPINK13Q1W4C9 94 aa7.95□□□□□ -1.14
TOP3A-208ENST00000542570 FAM209BQ5JX69 171 aa7.95□□□□□ -1.14
TOP3A-208ENST00000542570 LYZL1Q6UWQ5 148 aa7.95□□□□□ -1.14
TOP3A-208ENST00000542570 SETXQ7Z333 2677 aaKnown RBP7.94□□□□□ -1.14
TOP3A-208ENST00000542570 KNCNA6PVL3 124 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 LEPROTL1O95214 131 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 CTSGP08311 255 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 C8orf86Q6ZUL3 223 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 DAZ1Q9NQZ3 744 aaKnown RBP7.94□□□□□ -1.14
TOP3A-208ENST00000542570 I3L2K1 104 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 IGHV3-53P01767 116 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 APOHP02749 345 aaPredicted RBP7.94□□□□□ -1.14
TOP3A-208ENST00000542570 RRN3P1Q2M238 152 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 FXYD5Q96DB9 178 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 GCN1Q92616 2671 aaKnown RBP7.94□□□□□ -1.14
TOP3A-208ENST00000542570 TRBV19A0A075B6N1 114 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 GATA3P23771 443 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 TCTEX1D4Q5JR98 221 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 TEX29Q8N6K0 151 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 NUP35Q8NFH5 326 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 SPOCK3Q9BQ16 436 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 XCL2Q9UBD3 114 aa7.94□□□□□ -1.14
TOP3A-208ENST00000542570 TNRC6BQ9UPQ9 1833 aaKnown RBP7.94□□□□□ -1.14
TOP3A-208ENST00000542570 A0A087WWC5 75 aa7.93□□□□□ -1.14
TOP3A-208ENST00000542570 CDX1P47902 265 aaPredicted RBP7.93□□□□□ -1.14
TOP3A-208ENST00000542570 PRELID3AQ96N28 172 aa7.93□□□□□ -1.14
TOP3A-208ENST00000542570 A0A1B0GW64 132 aa7.93□□□□□ -1.14
TOP3A-208ENST00000542570 MT-ND6P03923 174 aa7.93□□□□□ -1.14
TOP3A-208ENST00000542570 P0C879 139 aa7.93□□□□□ -1.14
TOP3A-208ENST00000542570 SLURP1P55000 103 aa7.93□□□□□ -1.14
TOP3A-208ENST00000542570 STHQ8IWL8 128 aa7.93□□□□□ -1.14
TOP3A-208ENST00000542570 FANCD2OSQ96PS1 177 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms