RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SLC50A1Q9BRV3 221 aa18.44■□□□□ 0.54
CHFR-218ENST00000540963 MRPS12O15235 138 aaKnown RBP18.43■□□□□ 0.54
CHFR-218ENST00000540963 MBPP02686 304 aaPredicted RBP18.43■□□□□ 0.54
CHFR-218ENST00000540963 ZNF331Q9NQX6 463 aaPredicted RBP18.43■□□□□ 0.54
CHFR-218ENST00000540963 SMCO3A2RU48 225 aa18.42■□□□□ 0.54
CHFR-218ENST00000540963 K7EPK0 472 aa18.42■□□□□ 0.54
CHFR-218ENST00000540963 DAZ2Q13117 558 aaKnown RBP18.42■□□□□ 0.54
CHFR-218ENST00000540963 C7orf66A4D0T2 115 aa18.41■□□□□ 0.54
CHFR-218ENST00000540963 CENPXA8MT69 81 aa18.41■□□□□ 0.54
CHFR-218ENST00000540963 XGP55808 180 aa18.41■□□□□ 0.54
CHFR-218ENST00000540963 PXDC1Q5TGL8 231 aa18.41■□□□□ 0.54
CHFR-218ENST00000540963 GFI1BQ5VTD9 330 aa18.41■□□□□ 0.54
CHFR-218ENST00000540963 C18orf15Q96N68 181 aa18.41■□□□□ 0.54
CHFR-218ENST00000540963 C20orf85Q9H1P6 137 aa18.41■□□□□ 0.54
CHFR-218ENST00000540963 FNDC10F2Z333 226 aa18.4■□□□□ 0.54
CHFR-218ENST00000540963 CCSO14618 274 aa18.4■□□□□ 0.54
CHFR-218ENST00000540963 SCGB1D2O95969 90 aa18.4■□□□□ 0.54
CHFR-218ENST00000540963 C11orf1Q9H5F2 150 aa18.4■□□□□ 0.54
CHFR-218ENST00000540963 GSKIPQ9P0R6 139 aa18.4■□□□□ 0.54
CHFR-218ENST00000540963 A0A096LPF7 62 aa18.39■□□□□ 0.53
CHFR-218ENST00000540963 LYRM1O43325 122 aa18.39■□□□□ 0.53
CHFR-218ENST00000540963 TAS2R30P59541 319 aa18.39■□□□□ 0.53
CHFR-218ENST00000540963 ERVFC1-1P60608 527 aa18.39■□□□□ 0.53
CHFR-218ENST00000540963 KIR3DS1Q14943 382 aa18.39■□□□□ 0.53
CHFR-218ENST00000540963 FRZBQ92765 325 aa18.39■□□□□ 0.53
CHFR-218ENST00000540963 ODF3Q96PU9 254 aa18.39■□□□□ 0.53
CHFR-218ENST00000540963 PYGO2Q9BRQ0 406 aa18.39■□□□□ 0.53
CHFR-218ENST00000540963 ARL6Q9H0F7 186 aa18.39■□□□□ 0.53
CHFR-218ENST00000540963 ARV1Q9H2C2 271 aa18.39■□□□□ 0.53
CHFR-218ENST00000540963 TMPRSS5Q9H3S3 457 aa18.39■□□□□ 0.53
CHFR-218ENST00000540963 NPVFQ9HCQ7 196 aa18.39■□□□□ 0.53
CHFR-218ENST00000540963 SIVA1O15304 175 aa18.38■□□□□ 0.53
CHFR-218ENST00000540963 TSC22D2O75157 780 aa18.38■□□□□ 0.53
CHFR-218ENST00000540963 TCRBP04435 133 aa18.38■□□□□ 0.53
CHFR-218ENST00000540963 PRB4P10163 310 aaPredicted RBP18.38■□□□□ 0.53
CHFR-218ENST00000540963 VSIG2Q96IQ7 327 aa18.38■□□□□ 0.53
CHFR-218ENST00000540963 SLC38A11Q08AI6 406 aa18.37■□□□□ 0.53
CHFR-218ENST00000540963 Q5VSD8 79 aa18.37■□□□□ 0.53
CHFR-218ENST00000540963 SEC22CQ9BRL7 303 aa18.37■□□□□ 0.53
CHFR-218ENST00000540963 CNPY1Q3B7I2 92 aa18.36■□□□□ 0.53
CHFR-218ENST00000540963 OR10P1Q8NGE3 313 aa18.36■□□□□ 0.53
CHFR-218ENST00000540963 VPS13BQ7Z7G8 4022 aa18.36■□□□□ 0.53
CHFR-218ENST00000540963 TRAV6A0A075B6T7 132 aa18.35■□□□□ 0.53
CHFR-218ENST00000540963 TEPPQ6URK8 271 aa18.35■□□□□ 0.53
CHFR-218ENST00000540963 Q6ZTI0 123 aa18.35■□□□□ 0.53
CHFR-218ENST00000540963 NFE4Q86UQ8 179 aa18.35■□□□□ 0.53
CHFR-218ENST00000540963 BPIFA4PQ86YQ2 179 aa18.35■□□□□ 0.53
CHFR-218ENST00000540963 NDUFA13Q9P0J0 144 aa18.35■□□□□ 0.53
CHFR-218ENST00000540963 PXMP4Q9Y6I8 212 aa18.35■□□□□ 0.53
CHFR-218ENST00000540963 FAT1Q14517 4588 aa18.35■□□□□ 0.53
CHFR-218ENST00000540963 LEPP41159 167 aa18.34■□□□□ 0.53
CHFR-218ENST00000540963 IL15RAQ13261 267 aa18.34■□□□□ 0.53
CHFR-218ENST00000540963 LINC00305Q7Z4B0 112 aa18.34■□□□□ 0.53
CHFR-218ENST00000540963 PARD6GQ9BYG4 376 aaPredicted RBP18.34■□□□□ 0.53
CHFR-218ENST00000540963 MORN5Q5VZ52 161 aa18.33■□□□□ 0.52
CHFR-218ENST00000540963 ZNF431Q8TF32 576 aaPredicted RBP18.33■□□□□ 0.52
CHFR-218ENST00000540963 MGST2Q99735 147 aa18.33■□□□□ 0.52
CHFR-218ENST00000540963 TRGV2A0A075B6R0 118 aa18.32■□□□□ 0.52
CHFR-218ENST00000540963 AGPAT2O15120 278 aa18.32■□□□□ 0.52
CHFR-218ENST00000540963 ZNF546Q86UE3 836 aa18.32■□□□□ 0.52
CHFR-218ENST00000540963 ZNF680Q8NEM1 530 aa18.32■□□□□ 0.52
CHFR-218ENST00000540963 TMEM37Q8WXS4 190 aa18.32■□□□□ 0.52
CHFR-218ENST00000540963 NUDT15Q9NV35 164 aa18.32■□□□□ 0.52
CHFR-218ENST00000540963 MGAT4CQ9UBM8 478 aa18.32■□□□□ 0.52
CHFR-218ENST00000540963 TRAV12-3A0A0B4J271 114 aa18.31■□□□□ 0.52
CHFR-218ENST00000540963 PRAC2D3DTV9 90 aa18.31■□□□□ 0.52
CHFR-218ENST00000540963 IFNA5P01569 189 aa18.31■□□□□ 0.52
CHFR-218ENST00000540963 SNRPCP09234 159 aaKnown RBP18.31■□□□□ 0.52
CHFR-218ENST00000540963 GGACTQ9BVM4 153 aa18.31■□□□□ 0.52
CHFR-218ENST00000540963 MYCBP2O75592 4640 aa18.3■□□□□ 0.52
CHFR-218ENST00000540963 NPIPB6E9PJ23 425 aa18.3■□□□□ 0.52
CHFR-218ENST00000540963 GOSR2O14653 212 aa18.3■□□□□ 0.52
CHFR-218ENST00000540963 CT45A10P0DMU9 189 aa18.3■□□□□ 0.52
CHFR-218ENST00000540963 LINC00467Q9BRT7 94 aa18.3■□□□□ 0.52
CHFR-218ENST00000540963 LSM5Q9Y4Y9 91 aaKnown RBP18.3■□□□□ 0.52
CHFR-218ENST00000540963 FAM24AA6NFZ4 105 aa18.29■□□□□ 0.52
CHFR-218ENST00000540963 SLC17A3O00476 420 aa18.29■□□□□ 0.52
CHFR-218ENST00000540963 NXPH4O95158 308 aa18.29■□□□□ 0.52
CHFR-218ENST00000540963 IGLC2P0DOY2 106 aa18.29■□□□□ 0.52
CHFR-218ENST00000540963 C12orf45Q8N5I9 185 aaPredicted RBP18.29■□□□□ 0.52
CHFR-218ENST00000540963 SAT2Q96F10 170 aaPredicted RBP18.29■□□□□ 0.52
CHFR-218ENST00000540963 ICOSQ9Y6W8 199 aa18.29■□□□□ 0.52
CHFR-218ENST00000540963 FAM25EA8MYX2 175 aa18.28■□□□□ 0.52
CHFR-218ENST00000540963 K7EP13 123 aa18.28■□□□□ 0.52
CHFR-218ENST00000540963 SLC25A5P05141 298 aaKnown RBP18.28■□□□□ 0.52
CHFR-218ENST00000540963 GUK1Q16774 197 aa18.28■□□□□ 0.52
CHFR-218ENST00000540963 C11orf72Q8NBR9 251 aa18.28■□□□□ 0.52
CHFR-218ENST00000540963 CCDC32Q9BV29 185 aa18.28■□□□□ 0.52
CHFR-218ENST00000540963 A0A087WTM6 91 aa18.27■□□□□ 0.52
CHFR-218ENST00000540963 ZNF324O75467 553 aaPredicted RBP18.27■□□□□ 0.52
CHFR-218ENST00000540963 H2AFB2P0C5Z0 115 aa18.27■□□□□ 0.52
CHFR-218ENST00000540963 C2orf50Q96LR7 162 aa18.27■□□□□ 0.52
CHFR-218ENST00000540963 FUT9Q9Y231 359 aa18.27■□□□□ 0.52
CHFR-218ENST00000540963 TRAV9-2A0A087WT02 112 aa18.26■□□□□ 0.51
CHFR-218ENST00000540963 J3KRW8 73 aa18.26■□□□□ 0.51
CHFR-218ENST00000540963 COX7A2P2O60397 106 aa18.26■□□□□ 0.51
CHFR-218ENST00000540963 CST7O76096 145 aa18.26■□□□□ 0.51
CHFR-218ENST00000540963 FUSP35637 526 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHFR-218ENST00000540963 KRTAP10-1P60331 282 aa18.26■□□□□ 0.51
CHFR-218ENST00000540963 ICAM4Q14773 271 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms