RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 SHANK2-AS3Q9BTD1 123 aa9.64□□□□□ -0.87
PBX3-212ENST00000538998 A0A087X0K7 114 aa9.63□□□□□ -0.87
PBX3-212ENST00000538998 C9orf170A2RU37 121 aa9.63□□□□□ -0.87
PBX3-212ENST00000538998 NXPH4O95158 308 aa9.63□□□□□ -0.87
PBX3-212ENST00000538998 IAPPP10997 89 aa9.63□□□□□ -0.87
PBX3-212ENST00000538998 GCSHP23434 173 aa9.63□□□□□ -0.87
PBX3-212ENST00000538998 RAP2BP61225 183 aa9.63□□□□□ -0.87
PBX3-212ENST00000538998 RPP30P78346 268 aaKnown RBP9.63□□□□□ -0.87
PBX3-212ENST00000538998 RPUSD4Q96CM3 377 aaKnown RBP9.63□□□□□ -0.87
PBX3-212ENST00000538998 VSIG2Q96IQ7 327 aa9.63□□□□□ -0.87
PBX3-212ENST00000538998 GPN1Q9HCN4 374 aaPredicted RBP9.63□□□□□ -0.87
PBX3-212ENST00000538998 PRSS46E5RG02 174 aa9.62□□□□□ -0.87
PBX3-212ENST00000538998 AKR1C1Q04828 323 aa9.62□□□□□ -0.87
PBX3-212ENST00000538998 DAZ2Q13117 558 aaKnown RBP9.62□□□□□ -0.87
PBX3-212ENST00000538998 TMEM182Q6ZP80 229 aaPredicted RBP9.62□□□□□ -0.87
PBX3-212ENST00000538998 SEC22CQ9BRL7 303 aa9.62□□□□□ -0.87
PBX3-212ENST00000538998 HIGD1AQ9Y241 93 aa9.62□□□□□ -0.87
PBX3-212ENST00000538998 FAT1Q14517 4588 aa9.61□□□□□ -0.87
PBX3-212ENST00000538998 PRAF2O60831 178 aa9.61□□□□□ -0.87
PBX3-212ENST00000538998 GFI1BQ5VTD9 330 aa9.61□□□□□ -0.87
PBX3-212ENST00000538998 S100A7AQ86SG5 101 aa9.61□□□□□ -0.87
PBX3-212ENST00000538998 ZNF431Q8TF32 576 aaPredicted RBP9.61□□□□□ -0.87
PBX3-212ENST00000538998 CIB3Q96Q77 187 aaPredicted RBP9.61□□□□□ -0.87
PBX3-212ENST00000538998 MARVELD1Q9BSK0 173 aa9.61□□□□□ -0.87
PBX3-212ENST00000538998 TNFRSF18Q9Y5U5 241 aa9.61□□□□□ -0.87
PBX3-212ENST00000538998 TRGV2A0A075B6R0 118 aa9.6□□□□□ -0.87
PBX3-212ENST00000538998 TRAV9-2A0A087WT02 112 aa9.6□□□□□ -0.87
PBX3-212ENST00000538998 PITX3O75364 302 aa9.6□□□□□ -0.87
PBX3-212ENST00000538998 HYPMO75409 117 aa9.6□□□□□ -0.87
PBX3-212ENST00000538998 MED6O75586 246 aa9.6□□□□□ -0.87
PBX3-212ENST00000538998 IL5P05113 134 aa9.6□□□□□ -0.87
PBX3-212ENST00000538998 HOXB5P09067 269 aa9.6□□□□□ -0.87
PBX3-212ENST00000538998 CXCL2P19875 107 aa9.6□□□□□ -0.87
PBX3-212ENST00000538998 KIR3DS1Q14943 382 aa9.6□□□□□ -0.87
PBX3-212ENST00000538998 Q6ZTI0 123 aa9.6□□□□□ -0.87
PBX3-212ENST00000538998 C12orf45Q8N5I9 185 aaPredicted RBP9.6□□□□□ -0.87
PBX3-212ENST00000538998 TMEM70Q9BUB7 260 aa9.6□□□□□ -0.87
PBX3-212ENST00000538998 ICOSQ9Y6W8 199 aa9.6□□□□□ -0.87
PBX3-212ENST00000538998 DUXBA0A1W2PPF3 345 aa9.59□□□□□ -0.87
PBX3-212ENST00000538998 K7EP13 123 aa9.59□□□□□ -0.87
PBX3-212ENST00000538998 PRB4P10163 310 aaPredicted RBP9.59□□□□□ -0.87
PBX3-212ENST00000538998 HAMPP81172 84 aa9.59□□□□□ -0.87
PBX3-212ENST00000538998 CYP2G1PQ6ZSU1 146 aa9.59□□□□□ -0.87
PBX3-212ENST00000538998 MITD1Q8WV92 249 aa9.59□□□□□ -0.87
PBX3-212ENST00000538998 RNF24Q9Y225 148 aa9.59□□□□□ -0.87
PBX3-212ENST00000538998 SSNA1O43805 119 aa9.58□□□□□ -0.88
PBX3-212ENST00000538998 OR5G3P0C626 314 aa9.58□□□□□ -0.88
PBX3-212ENST00000538998 SLC25A6P12236 298 aa9.58□□□□□ -0.88
PBX3-212ENST00000538998 PLP1P60201 277 aa9.58□□□□□ -0.88
PBX3-212ENST00000538998 LCN15Q6UWW0 184 aa9.58□□□□□ -0.88
PBX3-212ENST00000538998 ACOT7LQ6ZUV0 252 aa9.58□□□□□ -0.88
PBX3-212ENST00000538998 LRTM2Q8N967 370 aa9.58□□□□□ -0.88
PBX3-212ENST00000538998 PYGO2Q9BRQ0 406 aa9.58□□□□□ -0.88
PBX3-212ENST00000538998 SLC50A1Q9BRV3 221 aa9.58□□□□□ -0.88
PBX3-212ENST00000538998 PARD6GQ9BYG4 376 aaPredicted RBP9.58□□□□□ -0.88
PBX3-212ENST00000538998 MSRB1Q9NZV6 116 aa9.58□□□□□ -0.88
PBX3-212ENST00000538998 LY96Q9Y6Y9 160 aa9.58□□□□□ -0.88
PBX3-212ENST00000538998 KRTAP29-1A8MX34 341 aaPredicted RBP9.57□□□□□ -0.88
PBX3-212ENST00000538998 SYNGR2O43760 224 aa9.57□□□□□ -0.88
PBX3-212ENST00000538998 LINC00869P0C866 280 aa9.57□□□□□ -0.88
PBX3-212ENST00000538998 SELENOTP62341 195 aa9.57□□□□□ -0.88
PBX3-212ENST00000538998 SERTAD4-AS1Q5TG53 156 aa9.57□□□□□ -0.88
PBX3-212ENST00000538998 ZNF680Q8NEM1 530 aa9.57□□□□□ -0.88
PBX3-212ENST00000538998 LINC00467Q9BRT7 94 aa9.57□□□□□ -0.88
PBX3-212ENST00000538998 ZNF331Q9NQX6 463 aaPredicted RBP9.57□□□□□ -0.88
PBX3-212ENST00000538998 TRAV12-3A0A0B4J271 114 aa9.56□□□□□ -0.88
PBX3-212ENST00000538998 SMCO3A2RU48 225 aa9.56□□□□□ -0.88
PBX3-212ENST00000538998 C5orf51A6NDU8 294 aa9.56□□□□□ -0.88
PBX3-212ENST00000538998 PMS2P5A8MQ11 134 aa9.56□□□□□ -0.88
PBX3-212ENST00000538998 FAM25EA8MYX2 175 aa9.56□□□□□ -0.88
PBX3-212ENST00000538998 WRBO00258 174 aa9.56□□□□□ -0.88
PBX3-212ENST00000538998 PAX4O43316 350 aa9.56□□□□□ -0.88
PBX3-212ENST00000538998 ZNF324O75467 553 aaPredicted RBP9.56□□□□□ -0.88
PBX3-212ENST00000538998 LEPP41159 167 aa9.56□□□□□ -0.88
PBX3-212ENST00000538998 SPANXN5Q5MJ07 72 aa9.56□□□□□ -0.88
PBX3-212ENST00000538998 NTN5Q8WTR8 489 aaPredicted RBP9.56□□□□□ -0.88
PBX3-212ENST00000538998 ODF3Q96PU9 254 aa9.56□□□□□ -0.88
PBX3-212ENST00000538998 FUT9Q9Y231 359 aa9.56□□□□□ -0.88
PBX3-212ENST00000538998 IGLV5-52A0A0A0MRZ9 124 aa9.55□□□□□ -0.88
PBX3-212ENST00000538998 TRGV1A0A0A0MS02 117 aa9.55□□□□□ -0.88
PBX3-212ENST00000538998 NPIPB6E9PJ23 425 aa9.55□□□□□ -0.88
PBX3-212ENST00000538998 J3KRW8 73 aa9.55□□□□□ -0.88
PBX3-212ENST00000538998 MRPS12O15235 138 aaKnown RBP9.55□□□□□ -0.88
PBX3-212ENST00000538998 LYPD5Q6UWN5 251 aa9.55□□□□□ -0.88
PBX3-212ENST00000538998 SYT8Q8NBV8 401 aa9.55□□□□□ -0.88
PBX3-212ENST00000538998 GSN-AS1Q9NRJ2 163 aa9.55□□□□□ -0.88
PBX3-212ENST00000538998 GSKIPQ9P0R6 139 aa9.55□□□□□ -0.88
PBX3-212ENST00000538998 STRAPQ9Y3F4 350 aaKnown RBP9.55□□□□□ -0.88
PBX3-212ENST00000538998 ALG5Q9Y673 324 aa9.55□□□□□ -0.88
PBX3-212ENST00000538998 UBR4Q5T4S7 5183 aa9.55□□□□□ -0.88
PBX3-212ENST00000538998 H3BP45 60 aa9.54□□□□□ -0.88
PBX3-212ENST00000538998 CCSO14618 274 aa9.54□□□□□ -0.88
PBX3-212ENST00000538998 PLA2G1BP04054 148 aaKnown RBP9.54□□□□□ -0.88
PBX3-212ENST00000538998 EVI2AP22794 236 aa9.54□□□□□ -0.88
PBX3-212ENST00000538998 SLAQ13239 276 aa9.54□□□□□ -0.88
PBX3-212ENST00000538998 MRPL23Q16540 153 aaKnown RBP9.54□□□□□ -0.88
PBX3-212ENST00000538998 IAH1Q2TAA2 248 aaPredicted RBP9.54□□□□□ -0.88
PBX3-212ENST00000538998 C11orf72Q8NBR9 251 aa9.54□□□□□ -0.88
PBX3-212ENST00000538998 ARL6Q9H0F7 186 aa9.54□□□□□ -0.88
PBX3-212ENST00000538998 ARV1Q9H2C2 271 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms