RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 CHCHD5Q9BSY4 110 aa9.79□□□□□ -0.84
USP3-203ENST00000538686 FER1L5A0AVI2 2057 aa9.79□□□□□ -0.84
USP3-203ENST00000538686 MED12Q93074 2177 aa9.79□□□□□ -0.84
USP3-203ENST00000538686 IGKV3D-15A0A087WSY6 115 aa9.79□□□□□ -0.84
USP3-203ENST00000538686 PLAUP00749 431 aa9.79□□□□□ -0.84
USP3-203ENST00000538686 CECR9P0C854 216 aa9.79□□□□□ -0.84
USP3-203ENST00000538686 EMP1P54849 157 aa9.79□□□□□ -0.84
USP3-203ENST00000538686 ZNRF2Q8NHG8 242 aa9.79□□□□□ -0.84
USP3-203ENST00000538686 LINC00526Q96FQ7 95 aa9.79□□□□□ -0.84
USP3-203ENST00000538686 C10orf142B7Z368 130 aa9.78□□□□□ -0.84
USP3-203ENST00000538686 LGALS9O00182 355 aa9.78□□□□□ -0.84
USP3-203ENST00000538686 P0DMU3 169 aa9.78□□□□□ -0.84
USP3-203ENST00000538686 FAM231AP0DMU4 169 aa9.78□□□□□ -0.84
USP3-203ENST00000538686 FAM231CP0DMU5 169 aa9.78□□□□□ -0.84
USP3-203ENST00000538686 HERVK_113P63121 156 aa9.78□□□□□ -0.84
USP3-203ENST00000538686 SCGB1D4Q6XE38 83 aa9.78□□□□□ -0.84
USP3-203ENST00000538686 ZNF71Q9NQZ8 489 aaPredicted RBP9.78□□□□□ -0.84
USP3-203ENST00000538686 GRPP07492 148 aa9.78□□□□□ -0.84
USP3-203ENST00000538686 NTN5Q8WTR8 489 aaPredicted RBP9.78□□□□□ -0.84
USP3-203ENST00000538686 NDUFA4L2Q9NRX3 87 aa9.78□□□□□ -0.84
USP3-203ENST00000538686 LOC107984640A0A0U1RRK4 108 aa9.77□□□□□ -0.85
USP3-203ENST00000538686 H3BMM0 161 aa9.77□□□□□ -0.85
USP3-203ENST00000538686 DUX1O43812 170 aa9.77□□□□□ -0.85
USP3-203ENST00000538686 IGHV4-34P06331 123 aa9.77□□□□□ -0.85
USP3-203ENST00000538686 CCL3P10147 92 aa9.77□□□□□ -0.85
USP3-203ENST00000538686 LOXL3P58215 753 aa9.77□□□□□ -0.85
USP3-203ENST00000538686 ATXN8Q156A1 80 aa9.77□□□□□ -0.85
USP3-203ENST00000538686 LYPD1Q8N2G4 141 aa9.77□□□□□ -0.85
USP3-203ENST00000538686 UBE2WQ96B02 151 aa9.77□□□□□ -0.85
USP3-203ENST00000538686 PROK2Q9HC23 129 aa9.77□□□□□ -0.85
USP3-203ENST00000538686 RNF186Q9NXI6 227 aa9.77□□□□□ -0.85
USP3-203ENST00000538686 PRO1854Q9UHT4 67 aa9.77□□□□□ -0.85
USP3-203ENST00000538686 SMKR1H3BMG3 65 aa9.76□□□□□ -0.85
USP3-203ENST00000538686 NDUFA3O95167 84 aa9.76□□□□□ -0.85
USP3-203ENST00000538686 TNFRSF6BO95407 300 aa9.76□□□□□ -0.85
USP3-203ENST00000538686 IGHV3-9P01782 118 aa9.76□□□□□ -0.85
USP3-203ENST00000538686 PLGLAQ15195 96 aa9.76□□□□□ -0.85
USP3-203ENST00000538686 SFTA2Q6UW10 78 aa9.76□□□□□ -0.85
USP3-203ENST00000538686 DYSFO75923 2080 aa9.76□□□□□ -0.85
USP3-203ENST00000538686 ZNF815PA8K554 130 aa9.76□□□□□ -0.85
USP3-203ENST00000538686 SSR4P51571 173 aa9.76□□□□□ -0.85
USP3-203ENST00000538686 TMEM155Q4W5P6 130 aa9.76□□□□□ -0.85
USP3-203ENST00000538686 HES3Q5TGS1 186 aa9.76□□□□□ -0.85
USP3-203ENST00000538686 ZNF503-AS2A6NEH8 195 aa9.75□□□□□ -0.85
USP3-203ENST00000538686 IQCF6A8MYZ5 107 aa9.75□□□□□ -0.85
USP3-203ENST00000538686 F5H768 121 aa9.75□□□□□ -0.85
USP3-203ENST00000538686 SAA2P0DJI9 122 aaPredicted RBP9.75□□□□□ -0.85
USP3-203ENST00000538686 ZNF134P52741 427 aa9.75□□□□□ -0.85
USP3-203ENST00000538686 LAGE3Q14657 143 aa9.75□□□□□ -0.85
USP3-203ENST00000538686 TEX36Q5VZQ5 186 aa9.75□□□□□ -0.85
USP3-203ENST00000538686 CABIN1Q9Y6J0 2220 aa9.75□□□□□ -0.85
USP3-203ENST00000538686 IGHV1-45A0A0A0MS14 117 aa9.75□□□□□ -0.85
USP3-203ENST00000538686 CRIP1P50238 77 aa9.75□□□□□ -0.85
USP3-203ENST00000538686 TFF2Q03403 129 aa9.75□□□□□ -0.85
USP3-203ENST00000538686 RPP25Q9BUL9 199 aaKnown RBP9.75□□□□□ -0.85
USP3-203ENST00000538686 IGHV1OR21-1A0A087WYE8 117 aa9.74□□□□□ -0.85
USP3-203ENST00000538686 TRBV10-2A0A0K0K1G8 114 aa9.74□□□□□ -0.85
USP3-203ENST00000538686 WNT9BO14905 357 aa9.74□□□□□ -0.85
USP3-203ENST00000538686 IGLC6P0CF74 106 aa9.74□□□□□ -0.85
USP3-203ENST00000538686 UCNP55089 124 aa9.74□□□□□ -0.85
USP3-203ENST00000538686 SRSF2Q01130 221 aaKnown RBP9.74□□□□□ -0.85
USP3-203ENST00000538686 RNF185Q96GF1 192 aa9.74□□□□□ -0.85
USP3-203ENST00000538686 DUX5Q96PT3 197 aa9.74□□□□□ -0.85
USP3-203ENST00000538686 ZNHIT1O43257 154 aa9.73□□□□□ -0.85
USP3-203ENST00000538686 EBI3Q14213 229 aa9.73□□□□□ -0.85
USP3-203ENST00000538686 EDDM3AQ14507 147 aa9.73□□□□□ -0.85
USP3-203ENST00000538686 TMEM170BQ5T4T1 132 aa9.73□□□□□ -0.85
USP3-203ENST00000538686 ZNF474Q6S9Z5 364 aaPredicted RBP9.73□□□□□ -0.85
USP3-203ENST00000538686 COX8CQ7Z4L0 72 aa9.73□□□□□ -0.85
USP3-203ENST00000538686 CNFNQ9BYD5 112 aa9.73□□□□□ -0.85
USP3-203ENST00000538686 PLA2G2FQ9BZM2 168 aa9.73□□□□□ -0.85
USP3-203ENST00000538686 CXXC4Q9H2H0 198 aa9.73□□□□□ -0.85
USP3-203ENST00000538686 IGLV2-18A0A075B6J9 118 aa9.73□□□□□ -0.85
USP3-203ENST00000538686 CFC1BP0CG36 223 aa9.73□□□□□ -0.85
USP3-203ENST00000538686 CFC1P0CG37 223 aa9.73□□□□□ -0.85
USP3-203ENST00000538686 LINC01620Q4KN68 170 aa9.73□□□□□ -0.85
USP3-203ENST00000538686 C3orf56Q8N813 242 aa9.73□□□□□ -0.85
USP3-203ENST00000538686 DCTN5Q9BTE1 182 aa9.73□□□□□ -0.85
USP3-203ENST00000538686 FAM236AA0A1B0GUQ0 79 aa9.72□□□□□ -0.85
USP3-203ENST00000538686 FAM236BA0A1B0GV22 79 aa9.72□□□□□ -0.85
USP3-203ENST00000538686 OOSP1A8MZH6 123 aa9.72□□□□□ -0.85
USP3-203ENST00000538686 ACYP1P07311 99 aa9.72□□□□□ -0.85
USP3-203ENST00000538686 CD3EP07766 207 aa9.72□□□□□ -0.85
USP3-203ENST00000538686 SAA1P0DJI8 122 aaPredicted RBP9.72□□□□□ -0.85
USP3-203ENST00000538686 ZNF56Q15929 161 aa9.72□□□□□ -0.85
USP3-203ENST00000538686 F8WDY8 70 aa9.71□□□□□ -0.85
USP3-203ENST00000538686 K7EM74 188 aa9.71□□□□□ -0.85
USP3-203ENST00000538686 SLC25A16P16260 332 aa9.71□□□□□ -0.85
USP3-203ENST00000538686 MRPS21P82921 87 aaKnown RBP9.71□□□□□ -0.85
USP3-203ENST00000538686 TMEM30BQ3MIR4 351 aa9.71□□□□□ -0.85
USP3-203ENST00000538686 TDHQ8IZJ6 230 aa9.71□□□□□ -0.85
USP3-203ENST00000538686 EXOC3-AS1Q8N2X6 119 aa9.71□□□□□ -0.85
USP3-203ENST00000538686 POM121L12Q8N7R1 296 aa9.71□□□□□ -0.85
USP3-203ENST00000538686 METRNQ9UJH8 293 aa9.71□□□□□ -0.85
USP3-203ENST00000538686 CACNA1DQ01668 2161 aa9.71□□□□□ -0.85
USP3-203ENST00000538686 H3BT86 120 aa9.71□□□□□ -0.86
USP3-203ENST00000538686 SH2D1AO60880 128 aa9.71□□□□□ -0.86
USP3-203ENST00000538686 CRYGBP07316 175 aa9.71□□□□□ -0.86
USP3-203ENST00000538686 CRYGAP11844 174 aa9.71□□□□□ -0.86
USP3-203ENST00000538686 COX6B1P14854 86 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms