RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 MED28Q9H204 178 aa9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 TMPRSS5Q9H3S3 457 aa9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 HIGD1AQ9Y241 93 aa9.64□□□□□ -0.87
SMARCA4-206ENST00000538456 SMCO3A2RU48 225 aa9.63□□□□□ -0.87
SMARCA4-206ENST00000538456 MED6O75586 246 aa9.63□□□□□ -0.87
SMARCA4-206ENST00000538456 OR5G3P0C626 314 aa9.63□□□□□ -0.87
SMARCA4-206ENST00000538456 RPP30P78346 268 aaKnown RBP9.63□□□□□ -0.87
SMARCA4-206ENST00000538456 SPANXN5Q5MJ07 72 aa9.63□□□□□ -0.87
SMARCA4-206ENST00000538456 LINC00612Q8N6U2 182 aa9.63□□□□□ -0.87
SMARCA4-206ENST00000538456 FRZBQ92765 325 aa9.63□□□□□ -0.87
SMARCA4-206ENST00000538456 CIB3Q96Q77 187 aaPredicted RBP9.63□□□□□ -0.87
SMARCA4-206ENST00000538456 VPS13BQ7Z7G8 4022 aa9.62□□□□□ -0.87
SMARCA4-206ENST00000538456 SNURFLB1AK76 121 aa9.62□□□□□ -0.87
SMARCA4-206ENST00000538456 EREGO14944 169 aa9.62□□□□□ -0.87
SMARCA4-206ENST00000538456 SYNGR2O43760 224 aa9.62□□□□□ -0.87
SMARCA4-206ENST00000538456 SSNA1O43805 119 aa9.62□□□□□ -0.87
SMARCA4-206ENST00000538456 HYPMO75409 117 aa9.62□□□□□ -0.87
SMARCA4-206ENST00000538456 CCNKO75909 580 aa9.62□□□□□ -0.87
SMARCA4-206ENST00000538456 SNRPCP09234 159 aaKnown RBP9.62□□□□□ -0.87
SMARCA4-206ENST00000538456 LINC00869P0C866 280 aa9.62□□□□□ -0.87
SMARCA4-206ENST00000538456 ERVFC1-1P60608 527 aa9.62□□□□□ -0.87
SMARCA4-206ENST00000538456 PPP1R1AQ13522 171 aa9.62□□□□□ -0.87
SMARCA4-206ENST00000538456 CYP2G1PQ6ZSU1 146 aa9.62□□□□□ -0.87
SMARCA4-206ENST00000538456 CCDC28AQ8IWP9 274 aa9.62□□□□□ -0.87
SMARCA4-206ENST00000538456 PGPEP1Q9NXJ5 209 aa9.62□□□□□ -0.87
SMARCA4-206ENST00000538456 A0A087X0K7 114 aa9.61□□□□□ -0.87
SMARCA4-206ENST00000538456 DUXBA0A1W2PPF3 345 aa9.61□□□□□ -0.87
SMARCA4-206ENST00000538456 C9orf170A2RU37 121 aa9.61□□□□□ -0.87
SMARCA4-206ENST00000538456 H3BNG1 76 aa9.61□□□□□ -0.87
SMARCA4-206ENST00000538456 J3KRW8 73 aa9.61□□□□□ -0.87
SMARCA4-206ENST00000538456 VAMP1P23763 118 aa9.61□□□□□ -0.87
SMARCA4-206ENST00000538456 GFI1BQ5VTD9 330 aa9.61□□□□□ -0.87
SMARCA4-206ENST00000538456 C12orf45Q8N5I9 185 aaPredicted RBP9.61□□□□□ -0.87
SMARCA4-206ENST00000538456 MITD1Q8WV92 249 aa9.61□□□□□ -0.87
SMARCA4-206ENST00000538456 ST6GAL2Q96JF0 529 aa9.61□□□□□ -0.87
SMARCA4-206ENST00000538456 SRRM2Q9UQ35 2752 aaKnown RBP9.61□□□□□ -0.87
SMARCA4-206ENST00000538456 A0A096LPF7 62 aa9.6□□□□□ -0.87
SMARCA4-206ENST00000538456 PIGBOS1A0A0B4J2F0 54 aa9.6□□□□□ -0.87
SMARCA4-206ENST00000538456 PMS2P5A8MQ11 134 aa9.6□□□□□ -0.87
SMARCA4-206ENST00000538456 SIVA1O15304 175 aa9.6□□□□□ -0.87
SMARCA4-206ENST00000538456 SFT2D2O95562 160 aa9.6□□□□□ -0.87
SMARCA4-206ENST00000538456 DNAH10OSP0CZ25 163 aa9.6□□□□□ -0.87
SMARCA4-206ENST00000538456 CDPF1Q6NVV7 123 aa9.6□□□□□ -0.87
SMARCA4-206ENST00000538456 Q6ZTI0 123 aa9.6□□□□□ -0.87
SMARCA4-206ENST00000538456 VSIG2Q96IQ7 327 aa9.6□□□□□ -0.87
SMARCA4-206ENST00000538456 C20orf144Q9BQM9 153 aa9.6□□□□□ -0.87
SMARCA4-206ENST00000538456 STRAPQ9Y3F4 350 aaKnown RBP9.6□□□□□ -0.87
SMARCA4-206ENST00000538456 TNFRSF18Q9Y5U5 241 aa9.6□□□□□ -0.87
SMARCA4-206ENST00000538456 SMR3BP02814 79 aaPredicted RBP9.59□□□□□ -0.87
SMARCA4-206ENST00000538456 SLC25A6P12236 298 aa9.59□□□□□ -0.87
SMARCA4-206ENST00000538456 KRTAP10-1P60331 282 aa9.59□□□□□ -0.87
SMARCA4-206ENST00000538456 CD300CQ08708 224 aa9.59□□□□□ -0.87
SMARCA4-206ENST00000538456 TCTE3Q8IZS6 198 aa9.59□□□□□ -0.87
SMARCA4-206ENST00000538456 ARL6Q9H0F7 186 aa9.59□□□□□ -0.87
SMARCA4-206ENST00000538456 MDFICQ9P1T7 246 aa9.59□□□□□ -0.87
SMARCA4-206ENST00000538456 MGAT4CQ9UBM8 478 aa9.59□□□□□ -0.87
SMARCA4-206ENST00000538456 TRGV2A0A075B6R0 118 aa9.58□□□□□ -0.88
SMARCA4-206ENST00000538456 TRAV12-3A0A0B4J271 114 aa9.58□□□□□ -0.88
SMARCA4-206ENST00000538456 PRAC2D3DTV9 90 aa9.58□□□□□ -0.88
SMARCA4-206ENST00000538456 H3BTX0 84 aa9.58□□□□□ -0.88
SMARCA4-206ENST00000538456 NXPH4O95158 308 aa9.58□□□□□ -0.88
SMARCA4-206ENST00000538456 IFNA5P01569 189 aa9.58□□□□□ -0.88
SMARCA4-206ENST00000538456 HOXB5P09067 269 aa9.58□□□□□ -0.88
SMARCA4-206ENST00000538456 HAMPP81172 84 aa9.58□□□□□ -0.88
SMARCA4-206ENST00000538456 ASB13Q8WXK3 278 aa9.58□□□□□ -0.88
SMARCA4-206ENST00000538456 ZNF331Q9NQX6 463 aaPredicted RBP9.58□□□□□ -0.88
SMARCA4-206ENST00000538456 MRPS12O15235 138 aaKnown RBP9.57□□□□□ -0.88
SMARCA4-206ENST00000538456 GIPP09681 153 aaPredicted RBP9.57□□□□□ -0.88
SMARCA4-206ENST00000538456 PLP1P60201 277 aa9.57□□□□□ -0.88
SMARCA4-206ENST00000538456 ICAM4Q14773 271 aa9.57□□□□□ -0.88
SMARCA4-206ENST00000538456 LCN15Q6UWW0 184 aa9.57□□□□□ -0.88
SMARCA4-206ENST00000538456 LRTM2Q8N967 370 aa9.57□□□□□ -0.88
SMARCA4-206ENST00000538456 C18orf15Q96N68 181 aa9.57□□□□□ -0.88
SMARCA4-206ENST00000538456 ARV1Q9H2C2 271 aa9.57□□□□□ -0.88
SMARCA4-206ENST00000538456 SLC17A3O00476 420 aa9.56□□□□□ -0.88
SMARCA4-206ENST00000538456 GOSR2O14653 212 aa9.56□□□□□ -0.88
SMARCA4-206ENST00000538456 CXCL2P19875 107 aa9.56□□□□□ -0.88
SMARCA4-206ENST00000538456 SELENOTP62341 195 aa9.56□□□□□ -0.88
SMARCA4-206ENST00000538456 SLC38A11Q08AI6 406 aa9.56□□□□□ -0.88
SMARCA4-206ENST00000538456 DAZ2Q13117 558 aaKnown RBP9.56□□□□□ -0.88
SMARCA4-206ENST00000538456 PATE2Q6UY27 113 aa9.56□□□□□ -0.88
SMARCA4-206ENST00000538456 S100A7AQ86SG5 101 aa9.56□□□□□ -0.88
SMARCA4-206ENST00000538456 SLC50A1Q9BRV3 221 aa9.56□□□□□ -0.88
SMARCA4-206ENST00000538456 GSN-AS1Q9NRJ2 163 aa9.56□□□□□ -0.88
SMARCA4-206ENST00000538456 A0A087WTM6 91 aa9.55□□□□□ -0.88
SMARCA4-206ENST00000538456 TRGV1A0A0A0MS02 117 aa9.55□□□□□ -0.88
SMARCA4-206ENST00000538456 POLR2GP62487 172 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMARCA4-206ENST00000538456 LINC00305Q7Z4B0 112 aa9.55□□□□□ -0.88
SMARCA4-206ENST00000538456 PSENENQ9NZ42 101 aa9.55□□□□□ -0.88
SMARCA4-206ENST00000538456 SSSCA1O60232 199 aa9.54□□□□□ -0.88
SMARCA4-206ENST00000538456 C1QBP02746 253 aa9.54□□□□□ -0.88
SMARCA4-206ENST00000538456 CT45A10P0DMU9 189 aa9.54□□□□□ -0.88
SMARCA4-206ENST00000538456 LEPP41159 167 aa9.54□□□□□ -0.88
SMARCA4-206ENST00000538456 H2BFSP57053 126 aa9.54□□□□□ -0.88
SMARCA4-206ENST00000538456 ZFP69Q49AA0 526 aa9.54□□□□□ -0.88
SMARCA4-206ENST00000538456 PYGO2Q9BRQ0 406 aa9.54□□□□□ -0.88
SMARCA4-206ENST00000538456 FUT9Q9Y231 359 aa9.54□□□□□ -0.88
SMARCA4-206ENST00000538456 ICOSQ9Y6W8 199 aa9.54□□□□□ -0.88
SMARCA4-206ENST00000538456 PAX4O43316 350 aa9.53□□□□□ -0.88
SMARCA4-206ENST00000538456 METTL15P1P0C7V9 234 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms