RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 GATD1Q8NB37 220 aa8.83□□□□□ -1
SLC28A1-204ENST00000538177 NDFIP1Q9BT67 221 aa8.83□□□□□ -1
SLC28A1-204ENST00000538177 IGSF10Q6WRI0 2623 aa8.83□□□□□ -1
SLC28A1-204ENST00000538177 SPG11Q96JI7 2443 aa8.82□□□□□ -1
SLC28A1-204ENST00000538177 FAM223BA6NKX1 122 aa8.82□□□□□ -1
SLC28A1-204ENST00000538177 RIGQ13278 110 aa8.82□□□□□ -1
SLC28A1-204ENST00000538177 FAM162BQ5T6X4 162 aa8.82□□□□□ -1
SLC28A1-204ENST00000538177 FAM223AQ8IWN6 122 aa8.82□□□□□ -1
SLC28A1-204ENST00000538177 FAM19A2Q8N3H0 131 aa8.82□□□□□ -1
SLC28A1-204ENST00000538177 PRR25Q96S07 402 aa8.82□□□□□ -1
SLC28A1-204ENST00000538177 CSMD1Q96PZ7 3565 aa8.82□□□□□ -1
SLC28A1-204ENST00000538177 LOC102724200A0A096LPH7 203 aaPredicted RBP8.82□□□□□ -1
SLC28A1-204ENST00000538177 A0A1B0GW15 77 aa8.82□□□□□ -1
SLC28A1-204ENST00000538177 IGF1P05019 195 aa8.82□□□□□ -1
SLC28A1-204ENST00000538177 KRTDAPP60985 99 aa8.82□□□□□ -1
SLC28A1-204ENST00000538177 RELQ04864 619 aaPredicted RBP8.82□□□□□ -1
SLC28A1-204ENST00000538177 LCN12Q6JVE5 192 aa8.82□□□□□ -1
SLC28A1-204ENST00000538177 U3KQE9 123 aa8.82□□□□□ -1
SLC28A1-204ENST00000538177 USP9XQ93008 2570 aaPredicted RBP8.81□□□□□ -1
SLC28A1-204ENST00000538177 A6NDX4 124 aa8.81□□□□□ -1
SLC28A1-204ENST00000538177 SH2D1AO60880 128 aa8.81□□□□□ -1
SLC28A1-204ENST00000538177 HSBP1O75506 76 aa8.81□□□□□ -1
SLC28A1-204ENST00000538177 BRI3O95415 125 aa8.81□□□□□ -1
SLC28A1-204ENST00000538177 ARMS2P0C7Q2 107 aa8.81□□□□□ -1
SLC28A1-204ENST00000538177 HLA-DMBP28068 263 aa8.81□□□□□ -1
SLC28A1-204ENST00000538177 DSCR9P59020 149 aa8.81□□□□□ -1
SLC28A1-204ENST00000538177 IGFL4Q6B9Z1 124 aa8.81□□□□□ -1
SLC28A1-204ENST00000538177 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.81□□□□□ -1
SLC28A1-204ENST00000538177 URB1-AS1Q96HZ7 61 aa8.81□□□□□ -1
SLC28A1-204ENST00000538177 VGLL1Q99990 258 aa8.81□□□□□ -1
SLC28A1-204ENST00000538177 TMEM189A5PLL7 270 aa8.8□□□□□ -1
SLC28A1-204ENST00000538177 C3orf79P0CE67 100 aa8.8□□□□□ -1
SLC28A1-204ENST00000538177 NTF3P20783 257 aa8.8□□□□□ -1
SLC28A1-204ENST00000538177 TDRG1Q3Y452 100 aa8.8□□□□□ -1
SLC28A1-204ENST00000538177 PRR31Q5SQ13 230 aa8.8□□□□□ -1
SLC28A1-204ENST00000538177 LURAP1LQ8IV03 231 aa8.8□□□□□ -1
SLC28A1-204ENST00000538177 METTL26Q96S19 204 aa8.8□□□□□ -1
SLC28A1-204ENST00000538177 C20orf144Q9BQM9 153 aa8.8□□□□□ -1
SLC28A1-204ENST00000538177 SLC50A1Q9BRV3 221 aa8.8□□□□□ -1
SLC28A1-204ENST00000538177 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.8□□□□□ -1
SLC28A1-204ENST00000538177 B4DSR2 109 aa8.8□□□□□ -1
SLC28A1-204ENST00000538177 IGHG2P01859 326 aa8.8□□□□□ -1
SLC28A1-204ENST00000538177 LINC00527Q9UJ94 153 aa8.8□□□□□ -1
SLC28A1-204ENST00000538177 COL12A1Q99715 3063 aa8.8□□□□□ -1
SLC28A1-204ENST00000538177 RBAKDNA6NC62 111 aa8.79□□□□□ -1
SLC28A1-204ENST00000538177 M0QZK8 103 aa8.79□□□□□ -1
SLC28A1-204ENST00000538177 TRGV3P03979 118 aa8.79□□□□□ -1
SLC28A1-204ENST00000538177 BMI1P35226 326 aa8.79□□□□□ -1
SLC28A1-204ENST00000538177 DMRTA1Q5VZB9 504 aa8.79□□□□□ -1
SLC28A1-204ENST00000538177 RNASEKQ6P5S7 137 aaKnown RBP8.79□□□□□ -1
SLC28A1-204ENST00000538177 BORCS7Q96B45 105 aa8.79□□□□□ -1
SLC28A1-204ENST00000538177 CHCHD1Q96BP2 118 aaKnown RBP8.79□□□□□ -1
SLC28A1-204ENST00000538177 H3BUA1 57 aa8.79□□□□□ -1
SLC28A1-204ENST00000538177 H3BUX3 64 aa8.79□□□□□ -1
SLC28A1-204ENST00000538177 M0R2Z0 102 aa8.79□□□□□ -1
SLC28A1-204ENST00000538177 PPIFP30405 207 aaKnown RBP8.79□□□□□ -1
SLC28A1-204ENST00000538177 Q8TAT8 98 aa8.79□□□□□ -1
SLC28A1-204ENST00000538177 VAMP8Q9BV40 100 aa8.79□□□□□ -1
SLC28A1-204ENST00000538177 HIF1ANQ9NWT6 349 aa8.79□□□□□ -1
SLC28A1-204ENST00000538177 SVEP1Q4LDE5 3571 aa8.78□□□□□ -1
SLC28A1-204ENST00000538177 IGHV3-66A0A0C4DH42 116 aa8.78□□□□□ -1
SLC28A1-204ENST00000538177 PRAC2D3DTV9 90 aa8.78□□□□□ -1
SLC28A1-204ENST00000538177 GATA3P23771 443 aa8.78□□□□□ -1
SLC28A1-204ENST00000538177 ZNF80P51504 273 aaPredicted RBP8.78□□□□□ -1
SLC28A1-204ENST00000538177 RPS20P60866 119 aaKnown RBP8.78□□□□□ -1
SLC28A1-204ENST00000538177 SRSF2Q01130 221 aaKnown RBP8.78□□□□□ -1
SLC28A1-204ENST00000538177 LY6EQ16553 131 aa8.78□□□□□ -1
SLC28A1-204ENST00000538177 ZNF493Q6ZR52 646 aa8.78□□□□□ -1
SLC28A1-204ENST00000538177 FLNCQ14315 2725 aa8.78□□□□□ -1
SLC28A1-204ENST00000538177 FAM181BA6NEQ2 426 aa8.78□□□□□ -1
SLC28A1-204ENST00000538177 AVPP01185 164 aa8.78□□□□□ -1
SLC28A1-204ENST00000538177 SLC25A16P16260 332 aa8.78□□□□□ -1
SLC28A1-204ENST00000538177 LBHQ53QV2 105 aaPredicted RBP8.78□□□□□ -1
SLC28A1-204ENST00000538177 CYB5R2Q6BCY4 276 aa8.78□□□□□ -1
SLC28A1-204ENST00000538177 LYZL1Q6UWQ5 148 aa8.78□□□□□ -1
SLC28A1-204ENST00000538177 MRPL53Q96EL3 112 aaKnown RBP8.78□□□□□ -1
SLC28A1-204ENST00000538177 USMG5Q96IX5 58 aa8.78□□□□□ -1
SLC28A1-204ENST00000538177 IGHV3OR16-13A0A075B7E8 117 aa8.77□□□□□ -1.01
SLC28A1-204ENST00000538177 IGHV3-74A0A0B4J1X5 117 aa8.77□□□□□ -1.01
SLC28A1-204ENST00000538177 TRAV8-2A0A0B4J237 113 aa8.77□□□□□ -1.01
SLC28A1-204ENST00000538177 ZNF207O43670 478 aaKnown RBP8.77□□□□□ -1.01
SLC28A1-204ENST00000538177 LINC00614P0C842 121 aa8.77□□□□□ -1.01
SLC28A1-204ENST00000538177 ARL3P36405 182 aa8.77□□□□□ -1.01
SLC28A1-204ENST00000538177 ERCC8Q13216 396 aa8.77□□□□□ -1.01
SLC28A1-204ENST00000538177 EBLN2Q6P2I7 272 aa8.77□□□□□ -1.01
SLC28A1-204ENST00000538177 ZNF575Q86XF7 245 aa8.77□□□□□ -1.01
SLC28A1-204ENST00000538177 RNF182Q8N6D2 247 aa8.77□□□□□ -1.01
SLC28A1-204ENST00000538177 NRGNQ92686 78 aa8.77□□□□□ -1.01
SLC28A1-204ENST00000538177 PAM16Q9Y3D7 125 aa8.77□□□□□ -1.01
SLC28A1-204ENST00000538177 TMSB15BA0A087X1C1 80 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 C2orf70A6NJV1 201 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 RAB4AP20338 218 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 PSMG3-AS1Q96PY0 264 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 MIEN1Q9BRT3 115 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 TPPP3Q9BW30 176 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 IGHV3-49A0A0A0MS15 119 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 FABP5P3A8MUU1 101 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 M0QZ24 198 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 PRB1P04280 392 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 CTRLP40313 264 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms