RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 PRB4P10163 310 aaPredicted RBP12.5□□□□□ -0.41
CHMP1A-202ENST00000535997 RELQ04864 619 aaPredicted RBP12.5□□□□□ -0.41
CHMP1A-202ENST00000535997 RAXQ9Y2V3 346 aa12.5□□□□□ -0.41
CHMP1A-202ENST00000535997 CSMD1Q96PZ7 3565 aa12.49□□□□□ -0.41
CHMP1A-202ENST00000535997 IGHV3-23P01764 117 aa12.49□□□□□ -0.41
CHMP1A-202ENST00000535997 FA2HQ7L5A8 372 aa12.49□□□□□ -0.41
CHMP1A-202ENST00000535997 Q8N9W7 124 aa12.49□□□□□ -0.41
CHMP1A-202ENST00000535997 SIRPDQ9H106 197 aa12.49□□□□□ -0.41
CHMP1A-202ENST00000535997 FAM104BQ5XKR9 115 aa12.49□□□□□ -0.41
CHMP1A-202ENST00000535997 OR10AG1Q8NH19 301 aa12.49□□□□□ -0.41
CHMP1A-202ENST00000535997 ORAOV1Q8WV07 137 aa12.49□□□□□ -0.41
CHMP1A-202ENST00000535997 SMAD5-AS1Q9Y6J3 95 aa12.49□□□□□ -0.41
CHMP1A-202ENST00000535997 U3KQK5 164 aa12.49□□□□□ -0.41
CHMP1A-202ENST00000535997 BMI1P35226 326 aa12.48□□□□□ -0.41
CHMP1A-202ENST00000535997 RPS20P60866 119 aaKnown RBP12.48□□□□□ -0.41
CHMP1A-202ENST00000535997 LINC01545Q5VT33 79 aa12.48□□□□□ -0.41
CHMP1A-202ENST00000535997 ZNF747Q9BV97 191 aa12.48□□□□□ -0.41
CHMP1A-202ENST00000535997 MS4A6AQ9H2W1 248 aa12.48□□□□□ -0.41
CHMP1A-202ENST00000535997 IGF2RP11717 2491 aa12.48□□□□□ -0.41
CHMP1A-202ENST00000535997 IGKV2-40A0A087WW87 121 aaPredicted RBP12.48□□□□□ -0.41
CHMP1A-202ENST00000535997 hDV102S1A0JD36 115 aa12.48□□□□□ -0.41
CHMP1A-202ENST00000535997 IGKV2D-40P01614 121 aaPredicted RBP12.48□□□□□ -0.41
CHMP1A-202ENST00000535997 KLK9Q2XQG4 91 aa12.48□□□□□ -0.41
CHMP1A-202ENST00000535997 PPP1R14DQ9NXH3 145 aa12.48□□□□□ -0.41
CHMP1A-202ENST00000535997 KLK9Q9UKQ9 250 aa12.48□□□□□ -0.41
CHMP1A-202ENST00000535997 SPTBN1Q01082 2364 aaKnown RBP12.47□□□□□ -0.41
CHMP1A-202ENST00000535997 MED13LQ71F56 2210 aa12.47□□□□□ -0.41
CHMP1A-202ENST00000535997 IGHG4P01861 327 aa12.47□□□□□ -0.41
CHMP1A-202ENST00000535997 RAB9AP51151 201 aa12.47□□□□□ -0.41
CHMP1A-202ENST00000535997 UBE2E1P51965 193 aa12.47□□□□□ -0.41
CHMP1A-202ENST00000535997 SLC25A34Q6PIV7 304 aa12.47□□□□□ -0.41
CHMP1A-202ENST00000535997 TMSB15BA0A087X1C1 80 aa12.46□□□□□ -0.41
CHMP1A-202ENST00000535997 ORMDL3Q8N138 153 aa12.46□□□□□ -0.41
CHMP1A-202ENST00000535997 FAM110DQ8TAY7 271 aaPredicted RBP12.46□□□□□ -0.41
CHMP1A-202ENST00000535997 ATRXP46100 2492 aa12.46□□□□□ -0.41
CHMP1A-202ENST00000535997 D6R8Y8 96 aa12.46□□□□□ -0.42
CHMP1A-202ENST00000535997 IFI27P40305 119 aaPredicted RBP12.46□□□□□ -0.42
CHMP1A-202ENST00000535997 SRSF2Q01130 221 aaKnown RBP12.46□□□□□ -0.42
CHMP1A-202ENST00000535997 TMEM213A2RRL7 107 aa12.45□□□□□ -0.42
CHMP1A-202ENST00000535997 C15orf32Q32M92 178 aa12.45□□□□□ -0.42
CHMP1A-202ENST00000535997 ZNF502Q8TBZ5 544 aa12.45□□□□□ -0.42
CHMP1A-202ENST00000535997 PRELID3AQ96N28 172 aa12.45□□□□□ -0.42
CHMP1A-202ENST00000535997 VGLL1Q99990 258 aa12.45□□□□□ -0.42
CHMP1A-202ENST00000535997 IGHV2-70DA0A0C4DH43 119 aa12.45□□□□□ -0.42
CHMP1A-202ENST00000535997 AMN1Q8IY45 258 aa12.45□□□□□ -0.42
CHMP1A-202ENST00000535997 ZNF738Q8NE65 137 aa12.45□□□□□ -0.42
CHMP1A-202ENST00000535997 AJUBAQ96IF1 538 aa12.45□□□□□ -0.42
CHMP1A-202ENST00000535997 SCRT2Q9NQ03 307 aa12.45□□□□□ -0.42
CHMP1A-202ENST00000535997 COX11Q9Y6N1 276 aa12.45□□□□□ -0.42
CHMP1A-202ENST00000535997 A0A1W2PPR1 153 aa12.44□□□□□ -0.42
CHMP1A-202ENST00000535997 CLEC3BP05452 202 aa12.44□□□□□ -0.42
CHMP1A-202ENST00000535997 UNQ5815/PRO19632Q6UWF5 114 aa12.44□□□□□ -0.42
CHMP1A-202ENST00000535997 SIGLEC8Q9NYZ4 499 aa12.44□□□□□ -0.42
CHMP1A-202ENST00000535997 TIMM8BQ9Y5J9 83 aaPredicted RBP12.44□□□□□ -0.42
CHMP1A-202ENST00000535997 H0Y8G0 127 aa12.44□□□□□ -0.42
CHMP1A-202ENST00000535997 BUB3O43684 328 aa12.44□□□□□ -0.42
CHMP1A-202ENST00000535997 NDUFS7O75251 213 aa12.44□□□□□ -0.42
CHMP1A-202ENST00000535997 ZNF80P51504 273 aaPredicted RBP12.44□□□□□ -0.42
CHMP1A-202ENST00000535997 FER1L6-AS1Q8NA97 138 aa12.44□□□□□ -0.42
CHMP1A-202ENST00000535997 MCRIP2Q9BUT9 160 aaKnown RBP12.44□□□□□ -0.42
CHMP1A-202ENST00000535997 COL6A6A6NMZ7 2263 aa12.43□□□□□ -0.42
CHMP1A-202ENST00000535997 A0A087X0K7 114 aa12.43□□□□□ -0.42
CHMP1A-202ENST00000535997 IGLC6P0CF74 106 aa12.43□□□□□ -0.42
CHMP1A-202ENST00000535997 GPR183P32249 361 aa12.43□□□□□ -0.42
CHMP1A-202ENST00000535997 MRPL51Q4U2R6 128 aaKnown RBP12.43□□□□□ -0.42
CHMP1A-202ENST00000535997 IGFL4Q6B9Z1 124 aa12.43□□□□□ -0.42
CHMP1A-202ENST00000535997 Q8TAT8 98 aa12.43□□□□□ -0.42
CHMP1A-202ENST00000535997 ASH1LQ9NR48 2969 aaKnown RBP12.43□□□□□ -0.42
CHMP1A-202ENST00000535997 FABP5P3A8MUU1 101 aa12.42□□□□□ -0.42
CHMP1A-202ENST00000535997 GOSR1O95249 250 aa12.42□□□□□ -0.42
CHMP1A-202ENST00000535997 EFNA4P52798 201 aa12.42□□□□□ -0.42
CHMP1A-202ENST00000535997 RHOGP84095 191 aa12.42□□□□□ -0.42
CHMP1A-202ENST00000535997 TWIST1Q15672 202 aa12.42□□□□□ -0.42
CHMP1A-202ENST00000535997 MPV17L2Q567V2 206 aa12.42□□□□□ -0.42
CHMP1A-202ENST00000535997 ZNF575Q86XF7 245 aa12.42□□□□□ -0.42
CHMP1A-202ENST00000535997 A0A096LNJ9 63 aa12.42□□□□□ -0.42
CHMP1A-202ENST00000535997 IGHV3-35A0A0C4DH35 117 aa12.42□□□□□ -0.42
CHMP1A-202ENST00000535997 LOC389332A0A1B0GUA5 103 aa12.42□□□□□ -0.42
CHMP1A-202ENST00000535997 FAM106AQ4KMX7 169 aa12.42□□□□□ -0.42
CHMP1A-202ENST00000535997 ZFAND3Q9H8U3 227 aa12.42□□□□□ -0.42
CHMP1A-202ENST00000535997 HLA-DMBP28068 263 aa12.41□□□□□ -0.42
CHMP1A-202ENST00000535997 CKS2P33552 79 aa12.41□□□□□ -0.42
CHMP1A-202ENST00000535997 ECSCRQ19T08 205 aa12.41□□□□□ -0.42
CHMP1A-202ENST00000535997 C12orf54Q6X4T0 127 aa12.41□□□□□ -0.42
CHMP1A-202ENST00000535997 IGHV3OR16-8A0A075B7F1 116 aa12.41□□□□□ -0.42
CHMP1A-202ENST00000535997 RBAKDNA6NC62 111 aa12.41□□□□□ -0.42
CHMP1A-202ENST00000535997 ATP6V0E1O15342 81 aa12.41□□□□□ -0.42
CHMP1A-202ENST00000535997 NUDT3O95989 172 aa12.41□□□□□ -0.42
CHMP1A-202ENST00000535997 SAA4P35542 130 aa12.41□□□□□ -0.42
CHMP1A-202ENST00000535997 CNFNQ9BYD5 112 aa12.41□□□□□ -0.42
CHMP1A-202ENST00000535997 SVEP1Q4LDE5 3571 aa12.41□□□□□ -0.42
CHMP1A-202ENST00000535997 ORM1P02763 201 aa12.4□□□□□ -0.42
CHMP1A-202ENST00000535997 LOXL1Q08397 574 aaPredicted RBP12.4□□□□□ -0.42
CHMP1A-202ENST00000535997 PMCHL2Q9BQD1 86 aa12.4□□□□□ -0.42
CHMP1A-202ENST00000535997 MUC21A0A0G2JKD1 596 aa12.4□□□□□ -0.42
CHMP1A-202ENST00000535997 MUC21A0A140T8X8 626 aa12.4□□□□□ -0.42
CHMP1A-202ENST00000535997 TCF21O43680 179 aa12.4□□□□□ -0.42
CHMP1A-202ENST00000535997 PTTG1IPP53801 180 aa12.4□□□□□ -0.42
CHMP1A-202ENST00000535997 LMO4P61968 165 aa12.4□□□□□ -0.42
CHMP1A-202ENST00000535997 PAX8Q06710 450 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms