RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 GVINP1Q7Z2Y8 2422 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 DSPPQ9NZW4 1301 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 DNAH5Q8TE73 4624 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 FRYQ5TBA9 3013 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 A0A0G2JMM0 328 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 A0A1W2PPB8 328 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 TMEM213A2RRL7 107 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 KIR3DP1A8MWS1 328 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 EVPLLA8MZ36 301 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 SSNA1O43805 119 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 APOA1P02647 267 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 SRIP30626 198 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 SPRR1AP35321 89 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 RPL5P46777 297 aaKnown RBP-1.12□□□□□ -2.59
COPB1-212ENST00000534771 AP3S2P59780 193 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 RPS20P60866 119 aaKnown RBP-1.12□□□□□ -2.59
COPB1-212ENST00000534771 MIR22HGQ0VDD5 57 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 KRR1Q13601 381 aaKnown RBP-1.12□□□□□ -2.59
COPB1-212ENST00000534771 ALKAL1Q6UXT8 129 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 C20orf196Q8IYI0 205 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 SREK1IP1Q8N9Q2 155 aaPredicted RBP-1.12□□□□□ -2.59
COPB1-212ENST00000534771 ZHX1-C8orf76Q96EF9 292 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 AP1S3Q96PC3 154 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 YPEL2Q96QA6 119 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 UCK1Q9HA47 277 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 MRPL35Q9NZE8 188 aaKnown RBP-1.12□□□□□ -2.59
COPB1-212ENST00000534771 PRO0255Q9UI72 69 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 LAMB1P07942 1786 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 URB1O60287 2271 aaKnown RBP-1.12□□□□□ -2.59
COPB1-212ENST00000534771 DNAH11Q96DT5 4516 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 ABCC11Q96J66 1382 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 RELNP78509 3460 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 MED13LQ71F56 2210 aa-1.12□□□□□ -2.59
COPB1-212ENST00000534771 SIPA1L2Q9P2F8 1722 aaPredicted RBP-1.12□□□□□ -2.59
COPB1-212ENST00000534771 RREB1Q92766 1687 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 NBASA2RRP1 2371 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 ESPL1Q14674 2120 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 LOC101927531A0A1B0GV80 90 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 hDV103S1A0JD37 113 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 FAM159BA6NKW6 160 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 NDUFS8O00217 210 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 PIAS1O75925 651 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 GYPBP06028 91 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 OR5G3P0C626 314 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 HIST1H1TP22492 207 aaPredicted RBP-1.13□□□□□ -2.59
COPB1-212ENST00000534771 DEFA1P59665 94 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 SNRPD3P62318 126 aaKnown RBP-1.13□□□□□ -2.59
COPB1-212ENST00000534771 RANP62826 216 aaKnown RBP-1.13□□□□□ -2.59
COPB1-212ENST00000534771 NEDD8Q15843 81 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 SFXN4Q6P4A7 337 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 GRPEL2Q8TAA5 225 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 C2orf50Q96LR7 162 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 SPRR2FQ96RM1 72 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 DCUN1D5Q9BTE7 237 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 CCDC90BQ9GZT6 254 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 OR51I1Q9H343 314 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 BIN3Q9NQY0 253 aa-1.13□□□□□ -2.59
COPB1-212ENST00000534771 SPG11Q96JI7 2443 aa-1.14□□□□□ -2.59
COPB1-212ENST00000534771 SCN8AQ9UQD0 1980 aa-1.14□□□□□ -2.59
COPB1-212ENST00000534771 BLMP54132 1417 aaPredicted RBP-1.14□□□□□ -2.59
COPB1-212ENST00000534771 C5orf42Q9H799 3197 aa-1.14□□□□□ -2.59
COPB1-212ENST00000534771 SPENQ96T58 3664 aaKnown RBP-1.14□□□□□ -2.59
COPB1-212ENST00000534771 NUP98P52948 1817 aa-1.14□□□□□ -2.59
COPB1-212ENST00000534771 TRAV26-2A0A0B4J265 109 aa-1.14□□□□□ -2.59
COPB1-212ENST00000534771 LOC730098B7Z3J9 87 aa-1.14□□□□□ -2.59
COPB1-212ENST00000534771 K7EQZ3 153 aa-1.14□□□□□ -2.59
COPB1-212ENST00000534771 PFDN6O15212 129 aa-1.14□□□□□ -2.59
COPB1-212ENST00000534771 TGOLN2O43493 480 aa-1.14□□□□□ -2.59
COPB1-212ENST00000534771 LRRN1Q6UXK5 716 aa-1.14□□□□□ -2.59
COPB1-212ENST00000534771 CHCHD1Q96BP2 118 aaKnown RBP-1.14□□□□□ -2.59
COPB1-212ENST00000534771 ZNF714Q96N38 554 aa-1.14□□□□□ -2.59
COPB1-212ENST00000534771 OR52E6Q96RD3 313 aa-1.14□□□□□ -2.59
COPB1-212ENST00000534771 RABL2AQ9UBK7 228 aaPredicted RBP-1.14□□□□□ -2.59
COPB1-212ENST00000534771 ROBO3Q96MS0 1386 aa-1.14□□□□□ -2.59
COPB1-212ENST00000534771 CDK12Q9NYV4 1490 aaPredicted RBP-1.14□□□□□ -2.59
COPB1-212ENST00000534771 TLN1Q9Y490 2541 aaKnown RBP-1.14□□□□□ -2.59
COPB1-212ENST00000534771 WRNQ14191 1432 aaPredicted RBP eCLIP-1.15□□□□□ -2.59
COPB1-212ENST00000534771 TRRAPQ9Y4A5 3859 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 BCL9LQ86UU0 1499 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 A0A087WTM6 91 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 HIGD1CA8MV81 97 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 C8orf88P0DMB2 117 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 SULT1A1P50225 295 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 PSME3P61289 254 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 H3F3AP84243 136 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 BCL2L15Q5TBC7 163 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 EIF5AL1Q6IS14 154 aaKnown RBP-1.15□□□□□ -2.59
COPB1-212ENST00000534771 COPS6Q7L5N1 327 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 SLC35B4Q969S0 331 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 NPCDR1Q9BY65 106 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 CST11Q9H112 138 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 LSM5Q9Y4Y9 91 aaKnown RBP-1.15□□□□□ -2.59
COPB1-212ENST00000534771 MYO15AQ9UKN7 3530 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 SPTA1P02549 2419 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 ACACAQ13085 2346 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 F5P12259 2224 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 TRPM1Q7Z4N2 1603 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 EVC2Q86UK5 1308 aa-1.15□□□□□ -2.59
COPB1-212ENST00000534771 MYO5AQ9Y4I1 1855 aaKnown RBP-1.16□□□□□ -2.59
COPB1-212ENST00000534771 GVQW2A0A096LPI5 108 aaPredicted RBP-1.16□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms