RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 MS4A6AQ9H2W1 248 aa12□□□□□ -0.49
TRIM3-213ENST00000533309 ZNF727A8MUV8 499 aa12□□□□□ -0.49
TRIM3-213ENST00000533309 APOC3P02656 99 aa12□□□□□ -0.49
TRIM3-213ENST00000533309 RPL35P42766 123 aaKnown RBP12□□□□□ -0.49
TRIM3-213ENST00000533309 TMEM61Q8N0U2 210 aa12□□□□□ -0.49
TRIM3-213ENST00000533309 DYNLRB2Q8TF09 96 aa12□□□□□ -0.49
TRIM3-213ENST00000533309 C16orf92Q96LL3 132 aa12□□□□□ -0.49
TRIM3-213ENST00000533309 C20orf173Q96LM9 149 aa12□□□□□ -0.49
TRIM3-213ENST00000533309 ZNF705FA8MVS1 300 aaPredicted RBP11.99□□□□□ -0.49
TRIM3-213ENST00000533309 DIRC3C9JPN6 131 aa11.99□□□□□ -0.49
TRIM3-213ENST00000533309 ISLRO14498 428 aa11.99□□□□□ -0.49
TRIM3-213ENST00000533309 AKR1C3P42330 323 aa11.99□□□□□ -0.49
TRIM3-213ENST00000533309 ARL6IP6Q8N6S5 226 aa11.99□□□□□ -0.49
TRIM3-213ENST00000533309 SPATA3Q8NHX4 192 aa11.99□□□□□ -0.49
TRIM3-213ENST00000533309 TMEM158Q8WZ71 300 aa11.99□□□□□ -0.49
TRIM3-213ENST00000533309 KLF12Q9Y4X4 402 aa11.99□□□□□ -0.49
TRIM3-213ENST00000533309 TRAV34A0A0B4J273 112 aa11.98□□□□□ -0.49
TRIM3-213ENST00000533309 K7EQG2 157 aa11.98□□□□□ -0.49
TRIM3-213ENST00000533309 CD300EQ496F6 205 aaPredicted RBP11.98□□□□□ -0.49
TRIM3-213ENST00000533309 FAM74A3Q4VXF1 159 aa11.98□□□□□ -0.49
TRIM3-213ENST00000533309 LCN12Q6JVE5 192 aa11.98□□□□□ -0.49
TRIM3-213ENST00000533309 GOLT1AQ6ZVE7 132 aa11.98□□□□□ -0.49
TRIM3-213ENST00000533309 MRPL53Q96EL3 112 aaKnown RBP11.98□□□□□ -0.49
TRIM3-213ENST00000533309 PRELID1Q9Y255 219 aa11.98□□□□□ -0.49
TRIM3-213ENST00000533309 PRAC2D3DTV9 90 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 IGLV2-11P01706 119 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 CNN1P51911 297 aaKnown RBP11.97□□□□□ -0.49
TRIM3-213ENST00000533309 PSG3Q16557 428 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 FAM24BQ8N5W8 94 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 IGF2BP2-AS1Q96M15 143 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 NIPSNAP3BQ9BS92 247 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 CLEC5AQ9NY25 188 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 IGKV2-40A0A087WW87 121 aaPredicted RBP11.97□□□□□ -0.49
TRIM3-213ENST00000533309 TRAV8-1A0A0A6YYK1 113 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 PGPEP1LA6NFU8 196 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 C9JCJ5 164 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 TSPAN4O14817 238 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 IGKV2D-40P01614 121 aaPredicted RBP11.97□□□□□ -0.49
TRIM3-213ENST00000533309 CSN1S1P47710 185 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 TFPI2P48307 235 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 TMEM183BQ1AE95 376 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 SAMD13Q5VXD3 122 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 WFDC3Q8IUB2 231 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 SGK494Q96LW2 274 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 SDF2L1Q9HCN8 221 aa11.97□□□□□ -0.49
TRIM3-213ENST00000533309 ANK2Q01484 3957 aa11.96□□□□□ -0.49
TRIM3-213ENST00000533309 IZUMO1RA6ND01 250 aa11.96□□□□□ -0.5
TRIM3-213ENST00000533309 SAP30O75446 220 aa11.96□□□□□ -0.5
TRIM3-213ENST00000533309 CENPWQ5EE01 88 aa11.96□□□□□ -0.5
TRIM3-213ENST00000533309 C3orf56Q8N813 242 aa11.96□□□□□ -0.5
TRIM3-213ENST00000533309 NAT8Q9UHE5 227 aa11.96□□□□□ -0.5
TRIM3-213ENST00000533309 DNASE2O00115 360 aaPredicted RBP11.95□□□□□ -0.5
TRIM3-213ENST00000533309 TAS2R60P59551 318 aa11.95□□□□□ -0.5
TRIM3-213ENST00000533309 TMEM241Q24JQ0 296 aa11.95□□□□□ -0.5
TRIM3-213ENST00000533309 C12orf54Q6X4T0 127 aa11.95□□□□□ -0.5
TRIM3-213ENST00000533309 RBPMS2Q6ZRY4 209 aaKnown RBP11.95□□□□□ -0.5
TRIM3-213ENST00000533309 SVBPQ8N300 66 aa11.95□□□□□ -0.5
TRIM3-213ENST00000533309 TMEM75Q8N9X5 138 aa11.95□□□□□ -0.5
TRIM3-213ENST00000533309 TVP23CQ96ET8 276 aa11.95□□□□□ -0.5
TRIM3-213ENST00000533309 FMC1Q96HJ9 113 aa11.95□□□□□ -0.5
TRIM3-213ENST00000533309 AGRNO00468 2067 aa11.94□□□□□ -0.5
TRIM3-213ENST00000533309 TRAV2A0A0B4J234 112 aa11.94□□□□□ -0.5
TRIM3-213ENST00000533309 TRAV25A0A0B4J276 109 aa11.94□□□□□ -0.5
TRIM3-213ENST00000533309 SERTM2A0A1B0GWG4 89 aa11.94□□□□□ -0.5
TRIM3-213ENST00000533309 IGLV1-51P01701 117 aa11.94□□□□□ -0.5
TRIM3-213ENST00000533309 IGLV2-8P01709 118 aa11.94□□□□□ -0.5
TRIM3-213ENST00000533309 DEFB1P60022 68 aa11.94□□□□□ -0.5
TRIM3-213ENST00000533309 UBE2G1P62253 170 aa11.94□□□□□ -0.5
TRIM3-213ENST00000533309 RPL23P62829 140 aaKnown RBP11.94□□□□□ -0.5
TRIM3-213ENST00000533309 Q86TA4 180 aa11.94□□□□□ -0.5
TRIM3-213ENST00000533309 ZNF738Q8NE65 137 aa11.94□□□□□ -0.5
TRIM3-213ENST00000533309 VGLL1Q99990 258 aa11.94□□□□□ -0.5
TRIM3-213ENST00000533309 TRBV6-1A0A0K0K1D8 114 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 ZNF688P0C7X2 276 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 ID1P41134 155 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 GNG4P50150 75 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 PAFAH1B2P68402 229 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 ATRAIDQ6UW56 229 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 SHISA2Q6UWI4 295 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 LINC01551Q86U37 167 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 OCC1Q8TAD7 63 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 SPAG8Q99932 426 aaPredicted RBP11.93□□□□□ -0.5
TRIM3-213ENST00000533309 CMYA5Q8N3K9 4069 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 PKD1L1Q8TDX9 2849 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 K7EQM0 130 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 LTAP01374 205 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 S100A9P06702 114 aaKnown RBP11.93□□□□□ -0.5
TRIM3-213ENST00000533309 FLI1Q01543 452 aaPredicted RBP11.93□□□□□ -0.5
TRIM3-213ENST00000533309 CLRN3Q8NCR9 226 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 AURKAIP1Q9NWT8 199 aaPredicted RBP11.93□□□□□ -0.5
TRIM3-213ENST00000533309 ZNF256Q9Y2P7 627 aaPredicted RBP11.93□□□□□ -0.5
TRIM3-213ENST00000533309 LY96Q9Y6Y9 160 aa11.93□□□□□ -0.5
TRIM3-213ENST00000533309 RBAKDNA6NC62 111 aa11.92□□□□□ -0.5
TRIM3-213ENST00000533309 K7EN84 100 aa11.92□□□□□ -0.5
TRIM3-213ENST00000533309 SNRPD3P62318 126 aaKnown RBP11.92□□□□□ -0.5
TRIM3-213ENST00000533309 PNRC1Q12796 327 aaPredicted RBP11.92□□□□□ -0.5
TRIM3-213ENST00000533309 NHLRC2Q8NBF2 726 aa11.92□□□□□ -0.5
TRIM3-213ENST00000533309 ASCL2Q99929 193 aa11.92□□□□□ -0.5
TRIM3-213ENST00000533309 PSG8Q9UQ74 426 aa11.92□□□□□ -0.5
TRIM3-213ENST00000533309 F6UB75 175 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms