RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 C2orf70A6NJV1 201 aa11.9□□□□□ -0.5
CACNA1E-208ENST00000533229 ATOH7Q8N100 152 aa11.9□□□□□ -0.5
CACNA1E-208ENST00000533229 CFAP46Q8IYW2 2715 aa11.9□□□□□ -0.5
CACNA1E-208ENST00000533229 NPSP0C0P6 89 aa11.9□□□□□ -0.5
CACNA1E-208ENST00000533229 PSG9Q00887 426 aa11.9□□□□□ -0.5
CACNA1E-208ENST00000533229 MAJINQ3KP22 176 aa11.9□□□□□ -0.5
CACNA1E-208ENST00000533229 MRPL52Q86TS9 123 aaKnown RBP11.9□□□□□ -0.5
CACNA1E-208ENST00000533229 NDFIP1Q9BT67 221 aa11.9□□□□□ -0.5
CACNA1E-208ENST00000533229 CSN1S1P47710 185 aa11.89□□□□□ -0.51
CACNA1E-208ENST00000533229 ZNF138P52744 262 aa11.89□□□□□ -0.51
CACNA1E-208ENST00000533229 KLK9Q2XQG4 91 aa11.89□□□□□ -0.51
CACNA1E-208ENST00000533229 SPATA45Q537H7 98 aa11.89□□□□□ -0.51
CACNA1E-208ENST00000533229 SPATA12Q7Z6I5 190 aa11.89□□□□□ -0.51
CACNA1E-208ENST00000533229 CCDC140Q96MF4 163 aa11.89□□□□□ -0.51
CACNA1E-208ENST00000533229 TPPP3Q9BW30 176 aa11.89□□□□□ -0.51
CACNA1E-208ENST00000533229 ZFAND3Q9H8U3 227 aa11.89□□□□□ -0.51
CACNA1E-208ENST00000533229 CLEC5AQ9NY25 188 aa11.89□□□□□ -0.51
CACNA1E-208ENST00000533229 KLK9Q9UKQ9 250 aa11.89□□□□□ -0.51
CACNA1E-208ENST00000533229 TFPI2P48307 235 aa11.89□□□□□ -0.51
CACNA1E-208ENST00000533229 TMEM219Q86XT9 240 aa11.89□□□□□ -0.51
CACNA1E-208ENST00000533229 Q8TAT8 98 aa11.89□□□□□ -0.51
CACNA1E-208ENST00000533229 VGLL1Q99990 258 aa11.89□□□□□ -0.51
CACNA1E-208ENST00000533229 TMSB15BA0A087X1C1 80 aa11.88□□□□□ -0.51
CACNA1E-208ENST00000533229 DLEU1O43261 78 aa11.88□□□□□ -0.51
CACNA1E-208ENST00000533229 C5orf56Q8N8D9 126 aa11.88□□□□□ -0.51
CACNA1E-208ENST00000533229 PRR25Q96S07 402 aa11.88□□□□□ -0.51
CACNA1E-208ENST00000533229 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.87□□□□□ -0.51
CACNA1E-208ENST00000533229 IGHV1-24A0A0C4DH33 117 aa11.87□□□□□ -0.51
CACNA1E-208ENST00000533229 CLPSL1A2RUU4 121 aa11.87□□□□□ -0.51
CACNA1E-208ENST00000533229 SH2D1AO60880 128 aa11.87□□□□□ -0.51
CACNA1E-208ENST00000533229 CT45A10P0DMU9 189 aa11.87□□□□□ -0.51
CACNA1E-208ENST00000533229 RELQ04864 619 aaPredicted RBP11.87□□□□□ -0.51
CACNA1E-208ENST00000533229 CLEC19AQ6UXS0 136 aa11.87□□□□□ -0.51
CACNA1E-208ENST00000533229 IGHV3-66A0A0C4DH42 116 aa11.87□□□□□ -0.51
CACNA1E-208ENST00000533229 BUB3O43684 328 aa11.87□□□□□ -0.51
CACNA1E-208ENST00000533229 SCGB2A1O75556 95 aa11.87□□□□□ -0.51
CACNA1E-208ENST00000533229 LINC00614P0C842 121 aa11.87□□□□□ -0.51
CACNA1E-208ENST00000533229 ZNF80P51504 273 aaPredicted RBP11.87□□□□□ -0.51
CACNA1E-208ENST00000533229 PAX8Q06710 450 aa11.87□□□□□ -0.51
CACNA1E-208ENST00000533229 LINC00173Q6ZV60 143 aa11.87□□□□□ -0.51
CACNA1E-208ENST00000533229 IGHV4-61A0A0C4DH41 118 aa11.86□□□□□ -0.51
CACNA1E-208ENST00000533229 SERTM2A0A1B0GWG4 89 aa11.86□□□□□ -0.51
CACNA1E-208ENST00000533229 BTF3P20290 206 aaKnown RBP11.86□□□□□ -0.51
CACNA1E-208ENST00000533229 BRD3OSQ6XYD6 125 aa11.86□□□□□ -0.51
CACNA1E-208ENST00000533229 COX8CQ7Z4L0 72 aa11.86□□□□□ -0.51
CACNA1E-208ENST00000533229 ZNF575Q86XF7 245 aa11.86□□□□□ -0.51
CACNA1E-208ENST00000533229 PIFOQ8TCI5 191 aa11.86□□□□□ -0.51
CACNA1E-208ENST00000533229 LINC00527Q9UJ94 153 aa11.86□□□□□ -0.51
CACNA1E-208ENST00000533229 IGHV3OR16-13A0A075B7E8 117 aa11.86□□□□□ -0.51
CACNA1E-208ENST00000533229 IGHV3-74A0A0B4J1X5 117 aa11.86□□□□□ -0.51
CACNA1E-208ENST00000533229 RIGQ13278 110 aa11.86□□□□□ -0.51
CACNA1E-208ENST00000533229 LYZL1Q6UWQ5 148 aa11.86□□□□□ -0.51
CACNA1E-208ENST00000533229 CHCHD1Q96BP2 118 aaKnown RBP11.86□□□□□ -0.51
CACNA1E-208ENST00000533229 CSMD2Q7Z408 3487 aa11.85□□□□□ -0.51
CACNA1E-208ENST00000533229 MUC21A0A0G2JKD1 596 aa11.85□□□□□ -0.51
CACNA1E-208ENST00000533229 MUC21A0A140T8X8 626 aa11.85□□□□□ -0.51
CACNA1E-208ENST00000533229 PRAC2D3DTV9 90 aa11.85□□□□□ -0.51
CACNA1E-208ENST00000533229 IGLC3P0DOY3 106 aa11.85□□□□□ -0.51
CACNA1E-208ENST00000533229 MUC21Q5SSG8 566 aa11.85□□□□□ -0.51
CACNA1E-208ENST00000533229 FAM162BQ5T6X4 162 aa11.85□□□□□ -0.51
CACNA1E-208ENST00000533229 GATD1Q8NB37 220 aa11.85□□□□□ -0.51
CACNA1E-208ENST00000533229 GOLT1BQ9Y3E0 138 aa11.85□□□□□ -0.51
CACNA1E-208ENST00000533229 TMEM189A5PLL7 270 aa11.84□□□□□ -0.51
CACNA1E-208ENST00000533229 CSN3P07498 182 aa11.84□□□□□ -0.51
CACNA1E-208ENST00000533229 RNF182Q8N6D2 247 aa11.84□□□□□ -0.51
CACNA1E-208ENST00000533229 ABCA2Q9BZC7 2435 aa11.84□□□□□ -0.51
CACNA1E-208ENST00000533229 TMEM213A2RRL7 107 aa11.84□□□□□ -0.51
CACNA1E-208ENST00000533229 ERCC8Q13216 396 aa11.84□□□□□ -0.51
CACNA1E-208ENST00000533229 SAPCD1Q5SSQ6 148 aa11.84□□□□□ -0.51
CACNA1E-208ENST00000533229 ARL6IP6Q8N6S5 226 aa11.84□□□□□ -0.51
CACNA1E-208ENST00000533229 IGHV3-49A0A0A0MS15 119 aa11.83□□□□□ -0.52
CACNA1E-208ENST00000533229 Q6AWC8 147 aa11.83□□□□□ -0.52
CACNA1E-208ENST00000533229 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.83□□□□□ -0.52
CACNA1E-208ENST00000533229 STPG4Q8N801 248 aa11.83□□□□□ -0.52
CACNA1E-208ENST00000533229 TRAV40A0A0B4J280 105 aa11.83□□□□□ -0.52
CACNA1E-208ENST00000533229 ZNF207O43670 478 aaKnown RBP11.83□□□□□ -0.52
CACNA1E-208ENST00000533229 GAGE1Q13065 139 aa11.83□□□□□ -0.52
CACNA1E-208ENST00000533229 ZNF493Q6ZR52 646 aa11.83□□□□□ -0.52
CACNA1E-208ENST00000533229 TMEM70Q9BUB7 260 aa11.83□□□□□ -0.52
CACNA1E-208ENST00000533229 MAP1AP78559 2803 aaPredicted RBP11.82□□□□□ -0.52
CACNA1E-208ENST00000533229 IGHV1-69DA0A0B4J2H0 117 aa11.82□□□□□ -0.52
CACNA1E-208ENST00000533229 CRXO43186 299 aaPredicted RBP11.82□□□□□ -0.52
CACNA1E-208ENST00000533229 LEPROTL1O95214 131 aa11.82□□□□□ -0.52
CACNA1E-208ENST00000533229 GOSR1O95249 250 aa11.82□□□□□ -0.52
CACNA1E-208ENST00000533229 IGHV1-69P01742 117 aa11.82□□□□□ -0.52
CACNA1E-208ENST00000533229 Q6ZN92 141 aa11.82□□□□□ -0.52
CACNA1E-208ENST00000533229 EEF1AKMT3Q96AZ1 226 aa11.82□□□□□ -0.52
CACNA1E-208ENST00000533229 PSMG3-AS1Q96PY0 264 aa11.82□□□□□ -0.52
CACNA1E-208ENST00000533229 UQCR10Q9UDW1 63 aa11.82□□□□□ -0.52
CACNA1E-208ENST00000533229 CACNA1AO00555 2505 aa11.82□□□□□ -0.52
CACNA1E-208ENST00000533229 A0A087X0K7 114 aa11.81□□□□□ -0.52
CACNA1E-208ENST00000533229 A0A1B0GW15 77 aa11.81□□□□□ -0.52
CACNA1E-208ENST00000533229 IGHV4-38-2P0DP08 117 aa11.81□□□□□ -0.52
CACNA1E-208ENST00000533229 C19orf54Q5BKX5 351 aa11.81□□□□□ -0.52
CACNA1E-208ENST00000533229 CCL19Q99731 98 aa11.81□□□□□ -0.52
CACNA1E-208ENST00000533229 MOB4Q9Y3A3 225 aa11.81□□□□□ -0.52
CACNA1E-208ENST00000533229 FLNCQ14315 2725 aa11.81□□□□□ -0.52
CACNA1E-208ENST00000533229 CELSR2Q9HCU4 2923 aa11.81□□□□□ -0.52
CACNA1E-208ENST00000533229 TRBV7-1A0A0A6YYK4 115 aa11.81□□□□□ -0.52
CACNA1E-208ENST00000533229 IGLL1P15814 213 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms