RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 Q6ZTI0 123 aa6.14□□□□□ -1.43
VPS11-203ENST00000529545 OR51S1Q8NGJ8 323 aa6.14□□□□□ -1.43
VPS11-203ENST00000529545 VSIG2Q96IQ7 327 aa6.14□□□□□ -1.43
VPS11-203ENST00000529545 NAA50Q9GZZ1 169 aaKnown RBP6.14□□□□□ -1.43
VPS11-203ENST00000529545 AP5S1Q9NUS5 200 aa6.14□□□□□ -1.43
VPS11-203ENST00000529545 SCP2D1Q9UJQ7 156 aa6.14□□□□□ -1.43
VPS11-203ENST00000529545 ICOSQ9Y6W8 199 aa6.14□□□□□ -1.43
VPS11-203ENST00000529545 DUXBA0A1W2PPF3 345 aa6.13□□□□□ -1.43
VPS11-203ENST00000529545 SMCO3A2RU48 225 aa6.13□□□□□ -1.43
VPS11-203ENST00000529545 WRBO00258 174 aa6.13□□□□□ -1.43
VPS11-203ENST00000529545 SELENOTP62341 195 aa6.13□□□□□ -1.43
VPS11-203ENST00000529545 DAZ2Q13117 558 aaKnown RBP6.13□□□□□ -1.43
VPS11-203ENST00000529545 GFI1BQ5VTD9 330 aa6.13□□□□□ -1.43
VPS11-203ENST00000529545 LCN15Q6UWW0 184 aa6.13□□□□□ -1.43
VPS11-203ENST00000529545 CYP2G1PQ6ZSU1 146 aa6.13□□□□□ -1.43
VPS11-203ENST00000529545 CHAC2Q8WUX2 184 aa6.13□□□□□ -1.43
VPS11-203ENST00000529545 PYGO2Q9BRQ0 406 aa6.13□□□□□ -1.43
VPS11-203ENST00000529545 SLC50A1Q9BRV3 221 aa6.13□□□□□ -1.43
VPS11-203ENST00000529545 TMEM70Q9BUB7 260 aa6.13□□□□□ -1.43
VPS11-203ENST00000529545 FUNDC2Q9BWH2 189 aa6.13□□□□□ -1.43
VPS11-203ENST00000529545 TNFRSF18Q9Y5U5 241 aa6.13□□□□□ -1.43
VPS11-203ENST00000529545 LY96Q9Y6Y9 160 aa6.13□□□□□ -1.43
VPS11-203ENST00000529545 IGLV5-52A0A0A0MRZ9 124 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 TRAV12-3A0A0B4J271 114 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 PMS2P5A8MQ11 134 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 J3KRW8 73 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 K7EP13 123 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 RGS5O15539 181 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 SYNGR2O43760 224 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 PITX3O75364 302 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 LINC00869P0C866 280 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 PRB4P10163 310 aaPredicted RBP6.12□□□□□ -1.43
VPS11-203ENST00000529545 CXCL2P19875 107 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 EVI2AP22794 236 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 LEPP41159 167 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 KIR3DS1Q14943 382 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 SPANXN5Q5MJ07 72 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 ACOT7LQ6ZUV0 252 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 SYT8Q8NBV8 401 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 ZNF680Q8NEM1 530 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 RAB2BQ8WUD1 216 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 MCUBQ9NWR8 336 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 MSRB1Q9NZV6 116 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 FUT9Q9Y231 359 aa6.12□□□□□ -1.43
VPS11-203ENST00000529545 STRAPQ9Y3F4 350 aaKnown RBP6.12□□□□□ -1.43
VPS11-203ENST00000529545 VPS13BQ7Z7G8 4022 aa6.11□□□□□ -1.43
VPS11-203ENST00000529545 hCG_2014768A0A024R1R8 64 aa6.11□□□□□ -1.43
VPS11-203ENST00000529545 TRGV1A0A0A0MS02 117 aa6.11□□□□□ -1.43
VPS11-203ENST00000529545 PRSS46E5RG02 174 aa6.11□□□□□ -1.43
VPS11-203ENST00000529545 ZNF324O75467 553 aaPredicted RBP6.11□□□□□ -1.43
VPS11-203ENST00000529545 PLA2G1BP04054 148 aaKnown RBP6.11□□□□□ -1.43
VPS11-203ENST00000529545 SLC25A6P12236 298 aa6.11□□□□□ -1.43
VPS11-203ENST00000529545 PLP1P60201 277 aa6.11□□□□□ -1.43
VPS11-203ENST00000529545 SLAQ13239 276 aa6.11□□□□□ -1.43
VPS11-203ENST00000529545 MRPL23Q16540 153 aaKnown RBP6.11□□□□□ -1.43
VPS11-203ENST00000529545 CTF1Q16619 201 aa6.11□□□□□ -1.43
VPS11-203ENST00000529545 SERTAD4-AS1Q5TG53 156 aa6.11□□□□□ -1.43
VPS11-203ENST00000529545 SMIM4Q8WVI0 70 aa6.11□□□□□ -1.43
VPS11-203ENST00000529545 PARD6GQ9BYG4 376 aaPredicted RBP6.11□□□□□ -1.43
VPS11-203ENST00000529545 ARL6Q9H0F7 186 aa6.11□□□□□ -1.43
VPS11-203ENST00000529545 ZNF331Q9NQX6 463 aaPredicted RBP6.11□□□□□ -1.43
VPS11-203ENST00000529545 PSCAO43653 123 aa6.1□□□□□ -1.43
VPS11-203ENST00000529545 HAMPP81172 84 aa6.1□□□□□ -1.43
VPS11-203ENST00000529545 IFITM3Q01628 133 aa6.1□□□□□ -1.43
VPS11-203ENST00000529545 IL18Q14116 193 aa6.1□□□□□ -1.43
VPS11-203ENST00000529545 ZNF846Q147U1 533 aa6.1□□□□□ -1.43
VPS11-203ENST00000529545 LYPD5Q6UWN5 251 aa6.1□□□□□ -1.43
VPS11-203ENST00000529545 NEGR1Q7Z3B1 354 aa6.1□□□□□ -1.43
VPS11-203ENST00000529545 BPIFA4PQ86YQ2 179 aa6.1□□□□□ -1.43
VPS11-203ENST00000529545 NTN5Q8WTR8 489 aaPredicted RBP6.1□□□□□ -1.43
VPS11-203ENST00000529545 ODF3Q96PU9 254 aa6.1□□□□□ -1.43
VPS11-203ENST00000529545 LINC00467Q9BRT7 94 aa6.1□□□□□ -1.43
VPS11-203ENST00000529545 GSN-AS1Q9NRJ2 163 aa6.1□□□□□ -1.43
VPS11-203ENST00000529545 RABL2AQ9UBK7 228 aaPredicted RBP6.1□□□□□ -1.43
VPS11-203ENST00000529545 PRO0255Q9UI72 69 aa6.1□□□□□ -1.43
VPS11-203ENST00000529545 RABL2BQ9UNT1 228 aa6.1□□□□□ -1.43
VPS11-203ENST00000529545 PXMP4Q9Y6I8 212 aa6.1□□□□□ -1.43
VPS11-203ENST00000529545 ANKRD20A5PA0PJZ0 165 aa6.09□□□□□ -1.43
VPS11-203ENST00000529545 KRTAP29-1A8MX34 341 aaPredicted RBP6.09□□□□□ -1.43
VPS11-203ENST00000529545 H3BP45 60 aa6.09□□□□□ -1.43
VPS11-203ENST00000529545 CTDSPLO15194 276 aa6.09□□□□□ -1.43
VPS11-203ENST00000529545 RGS21Q2M5E4 152 aa6.09□□□□□ -1.43
VPS11-203ENST00000529545 TMEM128Q5BJH2 165 aa6.09□□□□□ -1.43
VPS11-203ENST00000529545 PXDC1Q5TGL8 231 aa6.09□□□□□ -1.43
VPS11-203ENST00000529545 C10orf126Q8N4M7 172 aa6.09□□□□□ -1.43
VPS11-203ENST00000529545 ZNF431Q8TF32 576 aaPredicted RBP6.09□□□□□ -1.43
VPS11-203ENST00000529545 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.43
VPS11-203ENST00000529545 ARV1Q9H2C2 271 aa6.09□□□□□ -1.43
VPS11-203ENST00000529545 HHLA3Q9XRX5 114 aa6.09□□□□□ -1.43
VPS11-203ENST00000529545 C7orf71A4D174 169 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 PRAC2D3DTV9 90 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 GOSR2O14653 212 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 MRPS12O15235 138 aaKnown RBP6.08□□□□□ -1.44
VPS11-203ENST00000529545 IGHV3-53P01767 116 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 SLC25A5P05141 298 aaKnown RBP6.08□□□□□ -1.44
VPS11-203ENST00000529545 SNRPCP09234 159 aaKnown RBP6.08□□□□□ -1.44
VPS11-203ENST00000529545 CT45A10P0DMU9 189 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 SPCS2Q15005 226 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 LINC00305Q7Z4B0 112 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 EIF4E3Q8N5X7 224 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms