RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 ZNF767PQ75MW2 155 aa17.91■□□□□ 0.46
PVT1-212ENST00000521951 RPUSD4Q96CM3 377 aaKnown RBP17.91■□□□□ 0.46
PVT1-212ENST00000521951 PPT1P50897 306 aa17.9■□□□□ 0.46
PVT1-212ENST00000521951 SUMO1P63165 101 aaKnown RBP17.9■□□□□ 0.46
PVT1-212ENST00000521951 MRPL53Q96EL3 112 aaKnown RBP17.9■□□□□ 0.46
PVT1-212ENST00000521951 CITED4Q96RK1 184 aa17.9■□□□□ 0.46
PVT1-212ENST00000521951 KNCNA6PVL3 124 aa17.89■□□□□ 0.45
PVT1-212ENST00000521951 GGTLC3B5MD39 225 aa17.89■□□□□ 0.45
PVT1-212ENST00000521951 PRAC2D3DTV9 90 aa17.89■□□□□ 0.45
PVT1-212ENST00000521951 F6UB75 175 aa17.89■□□□□ 0.45
PVT1-212ENST00000521951 PAGE4O60829 102 aa17.89■□□□□ 0.45
PVT1-212ENST00000521951 NMBP08949 121 aa17.89■□□□□ 0.45
PVT1-212ENST00000521951 GNG13Q9P2W3 67 aa17.89■□□□□ 0.45
PVT1-212ENST00000521951 PMS2P11Q13670 270 aa17.88■□□□□ 0.45
PVT1-212ENST00000521951 GDF5OSQ5U4N7 250 aa17.88■□□□□ 0.45
PVT1-212ENST00000521951 ARL2-SNX15V9GYD0 113 aa17.88■□□□□ 0.45
PVT1-212ENST00000521951 ACTL10Q5JWF8 245 aa17.88■□□□□ 0.45
PVT1-212ENST00000521951 CST9LP1Q5W188 147 aa17.88■□□□□ 0.45
PVT1-212ENST00000521951 FOXI2Q6ZQN5 318 aa17.88■□□□□ 0.45
PVT1-212ENST00000521951 SAV1Q9H4B6 383 aaPredicted RBP17.88■□□□□ 0.45
PVT1-212ENST00000521951 MANBALQ9NQG1 85 aa17.88■□□□□ 0.45
PVT1-212ENST00000521951 K7EIL1 84 aa17.87■□□□□ 0.45
PVT1-212ENST00000521951 SLC25A5P05141 298 aaKnown RBP17.87■□□□□ 0.45
PVT1-212ENST00000521951 NKX6-2Q9C056 277 aaPredicted RBP17.87■□□□□ 0.45
PVT1-212ENST00000521951 SRD5A3Q9H8P0 318 aa17.87■□□□□ 0.45
PVT1-212ENST00000521951 A0A0J9YX75 114 aa17.86■□□□□ 0.45
PVT1-212ENST00000521951 ZNF705DP0CH99 300 aaPredicted RBP17.86■□□□□ 0.45
PVT1-212ENST00000521951 ZNF705BP0CI00 300 aaPredicted RBP17.86■□□□□ 0.45
PVT1-212ENST00000521951 CSN1S1P47710 185 aa17.86■□□□□ 0.45
PVT1-212ENST00000521951 EBLN2Q6P2I7 272 aa17.86■□□□□ 0.45
PVT1-212ENST00000521951 CMTM2Q8TAZ6 248 aa17.86■□□□□ 0.45
PVT1-212ENST00000521951 RXFP4Q8TDU9 374 aa17.86■□□□□ 0.45
PVT1-212ENST00000521951 IGHV4-30-4P0DP06 118 aa17.85■□□□□ 0.45
PVT1-212ENST00000521951 C5orf17Q8NAS9 161 aa17.85■□□□□ 0.45
PVT1-212ENST00000521951 OR8A1Q8NGG7 326 aa17.85■□□□□ 0.45
PVT1-212ENST00000521951 IFNA1P01562 189 aa17.84■□□□□ 0.45
PVT1-212ENST00000521951 HLA-DRB4P13762 266 aa17.84■□□□□ 0.45
PVT1-212ENST00000521951 ATP5G3P48201 142 aa17.84■□□□□ 0.45
PVT1-212ENST00000521951 RAB14P61106 215 aa17.84■□□□□ 0.45
PVT1-212ENST00000521951 CCDC28AQ8IWP9 274 aa17.84■□□□□ 0.45
PVT1-212ENST00000521951 TUBA4BQ9H853 241 aa17.84■□□□□ 0.45
PVT1-212ENST00000521951 HLA-DRB4X5D2U9 266 aa17.84■□□□□ 0.45
PVT1-212ENST00000521951 DIRC3C9JPN6 131 aa17.83■□□□□ 0.45
PVT1-212ENST00000521951 H3BMM0 161 aa17.83■□□□□ 0.45
PVT1-212ENST00000521951 GNG5P63218 68 aa17.83■□□□□ 0.45
PVT1-212ENST00000521951 HAGHQ16775 308 aa17.83■□□□□ 0.45
PVT1-212ENST00000521951 STHQ8IWL8 128 aa17.83■□□□□ 0.45
PVT1-212ENST00000521951 ARL6IP6Q8N6S5 226 aa17.83■□□□□ 0.45
PVT1-212ENST00000521951 EPDR1Q9UM22 224 aa17.83■□□□□ 0.45
PVT1-212ENST00000521951 RPH3ALQ9UNE2 315 aa17.83■□□□□ 0.45
PVT1-212ENST00000521951 HIST1H1AQ02539 215 aaPredicted RBP17.82■□□□□ 0.44
PVT1-212ENST00000521951 IGKV2-40A0A087WW87 121 aaPredicted RBP17.82■□□□□ 0.44
PVT1-212ENST00000521951 IGKV2D-40P01614 121 aaPredicted RBP17.82■□□□□ 0.44
PVT1-212ENST00000521951 BCL2P10415 239 aa17.82■□□□□ 0.44
PVT1-212ENST00000521951 OR10J6PQ8NGY7 276 aa17.82■□□□□ 0.44
PVT1-212ENST00000521951 RBMY1BA6NDE4 496 aaKnown RBP17.81■□□□□ 0.44
PVT1-212ENST00000521951 RBMY1EA6NEQ0 496 aaKnown RBP17.81■□□□□ 0.44
PVT1-212ENST00000521951 A8MZ25 164 aa17.81■□□□□ 0.44
PVT1-212ENST00000521951 C11orf94C9JXX5 98 aa17.81■□□□□ 0.44
PVT1-212ENST00000521951 DUSP14O95147 198 aaKnown RBP17.81■□□□□ 0.44
PVT1-212ENST00000521951 RBMY1DP0C7P1 496 aaKnown RBP17.81■□□□□ 0.44
PVT1-212ENST00000521951 CNN1P51911 297 aaKnown RBP17.81■□□□□ 0.44
PVT1-212ENST00000521951 CLLU1Q5K131 121 aa17.81■□□□□ 0.44
PVT1-212ENST00000521951 TRPT1Q86TN4 253 aaKnown RBP17.81■□□□□ 0.44
PVT1-212ENST00000521951 OR4B1Q8NGF8 309 aa17.81■□□□□ 0.44
PVT1-212ENST00000521951 RGS13O14921 159 aa17.8■□□□□ 0.44
PVT1-212ENST00000521951 IGKV3-20P01619 116 aa17.8■□□□□ 0.44
PVT1-212ENST00000521951 TCRAP04437 139 aa17.8■□□□□ 0.44
PVT1-212ENST00000521951 RPL35AP18077 110 aaKnown RBP17.8■□□□□ 0.44
PVT1-212ENST00000521951 ERCC8Q13216 396 aa17.8■□□□□ 0.44
PVT1-212ENST00000521951 GOLT1AQ6ZVE7 132 aa17.8■□□□□ 0.44
PVT1-212ENST00000521951 RARRES2Q99969 163 aa17.8■□□□□ 0.44
PVT1-212ENST00000521951 LOC102723971A0A1B0GUV8 181 aa17.79■□□□□ 0.44
PVT1-212ENST00000521951 RBFOX3A6NFN3 312 aa17.79■□□□□ 0.44
PVT1-212ENST00000521951 TAGLN2P37802 199 aaKnown RBP17.79■□□□□ 0.44
PVT1-212ENST00000521951 VGLL1Q99990 258 aa17.79■□□□□ 0.44
PVT1-212ENST00000521951 TXNDC17Q9BRA2 123 aa17.79■□□□□ 0.44
PVT1-212ENST00000521951 VAX2Q9UIW0 290 aa17.79■□□□□ 0.44
PVT1-212ENST00000521951 RBAKDNA6NC62 111 aa17.78■□□□□ 0.44
PVT1-212ENST00000521951 A8MTW9 85 aa17.78■□□□□ 0.44
PVT1-212ENST00000521951 NPIPB6E9PJ23 425 aa17.78■□□□□ 0.44
PVT1-212ENST00000521951 DEFA6Q01524 100 aa17.78■□□□□ 0.44
PVT1-212ENST00000521951 MEF2BQ02080 365 aaPredicted RBP17.78■□□□□ 0.44
PVT1-212ENST00000521951 DEFB121Q5J5C9 76 aa17.78■□□□□ 0.44
PVT1-212ENST00000521951 C9orf47Q6ZRZ4 202 aa17.78■□□□□ 0.44
PVT1-212ENST00000521951 CLUHP3Q96NS8 147 aa17.78■□□□□ 0.44
PVT1-212ENST00000521951 AGPAT4-IT1Q9H0P7 198 aa17.78■□□□□ 0.44
PVT1-212ENST00000521951 LINC00322Q6ZN03 302 aaPredicted RBP17.77■□□□□ 0.44
PVT1-212ENST00000521951 HIST1H2BAQ96A08 127 aa17.77■□□□□ 0.44
PVT1-212ENST00000521951 FAM210AQ96ND0 272 aa17.77■□□□□ 0.44
PVT1-212ENST00000521951 TCEAL7Q9BRU2 100 aa17.77■□□□□ 0.44
PVT1-212ENST00000521951 ATG101Q9BSB4 218 aa17.77■□□□□ 0.44
PVT1-212ENST00000521951 LOC102724200A0A096LPH7 203 aaPredicted RBP17.77■□□□□ 0.43
PVT1-212ENST00000521951 PEX7O00628 323 aa17.77■□□□□ 0.43
PVT1-212ENST00000521951 CYB561D1Q8N8Q1 229 aa17.77■□□□□ 0.43
PVT1-212ENST00000521951 SERTM2A0A1B0GWG4 89 aa17.76■□□□□ 0.43
PVT1-212ENST00000521951 F6UZH7 168 aa17.76■□□□□ 0.43
PVT1-212ENST00000521951 FRMD6-AS1P0C7T7 363 aa17.76■□□□□ 0.43
PVT1-212ENST00000521951 TOR2AQ5JU69 321 aa17.76■□□□□ 0.43
PVT1-212ENST00000521951 ZNF506Q5JVG8 444 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms