RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 COL4A5P29400 1685 aa0.58□□□□□ -2.32
SKP1-207ENST00000520417 ARHGEF11O15085 1522 aa0.58□□□□□ -2.32
SKP1-207ENST00000520417 LAMB4A4D0S4 1761 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 TNS3Q68CZ2 1445 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 LOC107984156A0A0G2JMH3 177 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 C9orf170A2RU37 121 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 E7EQ34 232 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 JMJD7-PLA2G4BH0Y9G9 81 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 H3BMG7 143 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 GABARAPH6UMI1 98 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 PPYP01298 95 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 BCL2P10415 239 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 SDC2P34741 201 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 TMEM14EPQ6UXP3 125 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 LINC00305Q7Z4B0 112 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 ARL17AQ8IVW1 177 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 OR5AS1Q8N127 324 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 PSMF1Q92530 271 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 OR4C12Q96R67 309 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 EFCAB11Q9BUY7 163 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 CST11Q9H112 138 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 LRTM1Q9HBL6 345 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 TRAPPC2LQ9UL33 140 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 MYH2Q9UKX2 1941 aa0.57□□□□□ -2.32
SKP1-207ENST00000520417 ASCC3Q8N3C0 2202 aaKnown RBP0.57□□□□□ -2.32
SKP1-207ENST00000520417 MGAMO43451 1857 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 TET1Q8NFU7 2136 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 A0A1W2PRE2 83 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 TPT1P13693 172 aaKnown RBP0.56□□□□□ -2.32
SKP1-207ENST00000520417 FABP4P15090 132 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 S100GP29377 79 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 EFNA4P52798 201 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 FXYD4P59646 89 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 TMEM128Q5BJH2 165 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 TMEM78Q5T7P6 136 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 KRTAP26-1Q6PEX3 210 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 FOXI2Q6ZQN5 318 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 SMIM15Q7Z3B0 74 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 PRR15Q8IV56 129 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 TEX29Q8N6K0 151 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 Q8N6K4 173 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.56□□□□□ -2.32
SKP1-207ENST00000520417 TMEM35BQ8NCS4 154 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 RMND5BQ96G75 393 aaPredicted RBP0.56□□□□□ -2.32
SKP1-207ENST00000520417 PRELID3AQ96N28 172 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 MCEEQ96PE7 176 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 LXNQ9BS40 222 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 CENPHQ9H3R5 247 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 BOKQ9UMX3 212 aaPredicted RBP0.56□□□□□ -2.32
SKP1-207ENST00000520417 PTPRFP10586 1907 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 MYH3P11055 1940 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 ROCK1Q13464 1354 aa0.56□□□□□ -2.32
SKP1-207ENST00000520417 YTHDC2Q9H6S0 1430 aaKnown RBP0.55□□□□□ -2.32
SKP1-207ENST00000520417 ASH1LQ9NR48 2969 aaKnown RBP0.55□□□□□ -2.32
SKP1-207ENST00000520417 AHNAKQ09666 5890 aaKnown RBP0.55□□□□□ -2.32
SKP1-207ENST00000520417 ADGRB2O60241 1585 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.55□□□□□ -2.32
SKP1-207ENST00000520417 TRAV13-1A0A0B4J241 112 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 C3orf85A0A1B0GTC6 90 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 TRDV1A0A1B0GX56 115 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 FAM107AO95990 144 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 IGLV3-1P01715 115 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 TRACP01848 142 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 NEDD8Q15843 81 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 SBSPONQ8IVN8 264 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 C5orf17Q8NAS9 161 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 TMEM229BQ8NBD8 167 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 PLPP5Q8NEB5 264 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 OR5AK2Q8NH90 309 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 MRPL40Q9NQ50 206 aaKnown RBP0.55□□□□□ -2.32
SKP1-207ENST00000520417 NIT2Q9NQR4 276 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 FKBP11Q9NYL4 201 aa0.55□□□□□ -2.32
SKP1-207ENST00000520417 ZFC3H1O60293 1989 aaKnown RBP0.55□□□□□ -2.32
SKP1-207ENST00000520417 CAMSAP1Q5T5Y3 1602 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 A0A1W2PPM0 123 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 H7BYZ3 331 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 SPTBP11277 2137 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 FOXA3P55318 350 aaPredicted RBP0.54□□□□□ -2.32
SKP1-207ENST00000520417 TFAMQ00059 246 aaKnown RBP0.54□□□□□ -2.32
SKP1-207ENST00000520417 OCIAD2Q56VL3 154 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 SAMD13Q5VXD3 122 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 HRCT1Q6UXD1 115 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 C3orf62Q6ZUJ4 267 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 OR9Q1Q8NGQ5 310 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 OR10AC1Q8NH08 325 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 THEM6Q8WUY1 208 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 DIRC1Q969H9 104 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 HSPB8Q9UJY1 196 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 NUP98P52948 1817 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 TANC2Q9HCD6 1990 aa0.54□□□□□ -2.32
SKP1-207ENST00000520417 TRBV27A0A0K0K1C4 114 aa0.53□□□□□ -2.32
SKP1-207ENST00000520417 BBIP1A8MTZ0 92 aa0.53□□□□□ -2.32
SKP1-207ENST00000520417 ZNF727A8MUV8 499 aa0.53□□□□□ -2.32
SKP1-207ENST00000520417 TSTD3H0UI37 97 aa0.53□□□□□ -2.32
SKP1-207ENST00000520417 H0YJX3 145 aa0.53□□□□□ -2.32
SKP1-207ENST00000520417 M0QZK8 103 aa0.53□□□□□ -2.32
SKP1-207ENST00000520417 IGHV3-33P01772 117 aa0.53□□□□□ -2.32
SKP1-207ENST00000520417 CD14P08571 375 aa0.53□□□□□ -2.32
SKP1-207ENST00000520417 RPL7P18124 248 aaKnown RBP0.53□□□□□ -2.32
SKP1-207ENST00000520417 LSM3P62310 102 aaKnown RBP0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms