RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 RPP21Q9H633 154 aaKnown RBP3.96□□□□□ -1.77
SDC2-204ENST00000519914 MINOS1-NBL1R4GNA1 71 aa3.96□□□□□ -1.77
SDC2-204ENST00000519914 DMXL1Q9Y485 3027 aa3.96□□□□□ -1.78
SDC2-204ENST00000519914 RP1L1Q8IWN7 2480 aaPredicted RBP3.96□□□□□ -1.78
SDC2-204ENST00000519914 MUC6Q6W4X9 2439 aa3.96□□□□□ -1.78
SDC2-204ENST00000519914 IGLV11-55A0A075B6I3 123 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 TRBV19A0A075B6N1 114 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 IGHV3-72A0A0B4J1Y9 119 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 TRAV34A0A0B4J273 112 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 A0A1B0GW15 77 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 FBLL1A6NHQ2 334 aaKnown RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 HIGD1CA8MV81 97 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 VWC2LB2RUY7 222 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 DIRC3C9JPN6 131 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 TIMM23O14925 209 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 ZNF207O43670 478 aaKnown RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 NUDT3O95989 172 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 APOHP02749 345 aaPredicted RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 ORM2P19652 201 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 SRIP30626 198 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 GPR6P46095 362 aaPredicted RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 GNG5P63218 68 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 SEC11AP67812 179 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 HBBP68871 147 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 CD300EQ496F6 205 aaPredicted RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 SPATA45Q537H7 98 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 PSMG4Q5JS54 123 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 CCDC144NLQ6NUI1 221 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 ZNF562Q6V9R5 426 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 SIGLEC15Q6ZMC9 328 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 LINC00322Q6ZN03 302 aaPredicted RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 RBPMS2Q6ZRY4 209 aaKnown RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 FA2HQ7L5A8 372 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 ZNF491Q8N8L2 437 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 FER1L6-AS1Q8NA97 138 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 LINC01560Q8TB33 94 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 TIMD4Q96H15 378 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 RASL11BQ9BPW5 248 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 NDFIP1Q9BT67 221 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 SAMD10Q9BYL1 202 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 NRN1Q9NPD7 142 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 PAM16Q9Y3D7 125 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 TNFRSF18Q9Y5U5 241 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 ABCA1O95477 2261 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 MAP1BP46821 2468 aaKnown RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 SMG1Q96Q15 3661 aaKnown RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 PRRC2CQ9Y520 2896 aaKnown RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 LAMA5O15230 3695 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 ANKHD1Q8IWZ3 2542 aaKnown RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 TMEM189A5PLL7 270 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 GAGE10A6NGK3 116 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 ZNF785A8K8V0 405 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 LYNX1G3V0Z9 82 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 M0QZ24 198 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 CCL21O00585 134 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 CRXO43186 299 aaPredicted RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 CA1P00915 261 aaPredicted RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 P01737 135 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 HLA-DRB1P01911 266 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 LYNX1P0DP58 116 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 PMCHP20382 165 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 COX7A1P24310 79 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 CDKN1AP38936 164 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 TFPI2P48307 235 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 AMTP48728 403 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 CRYBA4P53673 196 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 TCL1AP56279 114 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 RPL24P83731 157 aaKnown RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 SRSF2Q01130 221 aaKnown RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 Q5PR19 223 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 ASPHD1Q5U4P2 390 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 Q6AWC8 147 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 BPIFA4PQ86YQ2 179 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 DEFB125Q8N687 156 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 VN1R17PQ8TDU5 208 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 GTSF1Q8WW33 167 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 BORCS7Q96B45 105 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 CHCHD1Q96BP2 118 aaKnown RBP3.95□□□□□ -1.78
SDC2-204ENST00000519914 URB1-AS1Q96HZ7 61 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 ZNF414Q96IQ9 312 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 RCHY1Q96PM5 261 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 ST20Q9HBF5 79 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 SERTAD4Q9NUC0 356 aa3.95□□□□□ -1.78
SDC2-204ENST00000519914 ANKRD11Q6UB99 2663 aaPredicted RBP3.94□□□□□ -1.78
SDC2-204ENST00000519914 MGAQ8IWI9 3026 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 ABCA4P78363 2273 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 PTPRZ1P23471 2315 aaPredicted RBP3.94□□□□□ -1.78
SDC2-204ENST00000519914 TRAV9-2A0A087WT02 112 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 C2orf70A6NJV1 201 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 TSPAN13O95857 204 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 IGHV3-48P01763 117 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 OR5AL1P0C617 328 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 C3orf79P0CE67 100 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 S100A7P31151 101 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 RAB9AP51151 201 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 MFAP4P55083 255 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 LYZP61626 148 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 KIAA1644Q3SXP7 199 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 FAM120AOSQ5T036 256 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 ZNF493Q6ZR52 646 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms