RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 M0R3E3 92 aa11.96□□□□□ -0.49
PCM1-204ENST00000517730 TNFRSF13BO14836 293 aaPredicted RBP11.96□□□□□ -0.49
PCM1-204ENST00000517730 WT1P19544 449 aaPredicted RBP11.96□□□□□ -0.49
PCM1-204ENST00000517730 ZNF491Q8N8L2 437 aa11.96□□□□□ -0.49
PCM1-204ENST00000517730 RNF125Q96EQ8 232 aa11.96□□□□□ -0.49
PCM1-204ENST00000517730 CADP27708 2225 aa11.96□□□□□ -0.49
PCM1-204ENST00000517730 E9PLD3 99 aa11.96□□□□□ -0.5
PCM1-204ENST00000517730 IGKCP01834 107 aa11.96□□□□□ -0.5
PCM1-204ENST00000517730 LOXP28300 417 aaPredicted RBP11.96□□□□□ -0.5
PCM1-204ENST00000517730 ZNF562Q6V9R5 426 aa11.96□□□□□ -0.5
PCM1-204ENST00000517730 CEND1Q8N111 149 aa11.96□□□□□ -0.5
PCM1-204ENST00000517730 NXT2Q9NPJ8 142 aaKnown RBP11.96□□□□□ -0.5
PCM1-204ENST00000517730 IGKV2D-26A0A0A0MRZ7 120 aa11.95□□□□□ -0.5
PCM1-204ENST00000517730 A0A1B0GV72 72 aa11.95□□□□□ -0.5
PCM1-204ENST00000517730 GAGE12HA6NDE8 117 aa11.95□□□□□ -0.5
PCM1-204ENST00000517730 SMKR1H3BMG3 65 aa11.95□□□□□ -0.5
PCM1-204ENST00000517730 GTSF1LQ9H1H1 148 aa11.95□□□□□ -0.5
PCM1-204ENST00000517730 TRBV25-1A0A075B6N4 114 aa11.95□□□□□ -0.5
PCM1-204ENST00000517730 ZNF207O43670 478 aaKnown RBP11.95□□□□□ -0.5
PCM1-204ENST00000517730 ATP5LO75964 103 aa11.95□□□□□ -0.5
PCM1-204ENST00000517730 BMI1P35226 326 aa11.95□□□□□ -0.5
PCM1-204ENST00000517730 TAL2Q16559 108 aa11.95□□□□□ -0.5
PCM1-204ENST00000517730 LYPD2Q6UXB3 125 aa11.95□□□□□ -0.5
PCM1-204ENST00000517730 C18orf15Q96N68 181 aa11.95□□□□□ -0.5
PCM1-204ENST00000517730 SPANXB1Q9NS25 103 aaPredicted RBP11.95□□□□□ -0.5
PCM1-204ENST00000517730 TRIOBPQ9H2D6 2365 aa11.95□□□□□ -0.5
PCM1-204ENST00000517730 IGLC6P0CF74 106 aa11.94□□□□□ -0.5
PCM1-204ENST00000517730 LEPP41159 167 aa11.94□□□□□ -0.5
PCM1-204ENST00000517730 SRSF2Q01130 221 aaKnown RBP11.94□□□□□ -0.5
PCM1-204ENST00000517730 WFDC3Q8IUB2 231 aa11.94□□□□□ -0.5
PCM1-204ENST00000517730 CSMD1Q96PZ7 3565 aa11.94□□□□□ -0.5
PCM1-204ENST00000517730 A0A1W2PRD5 423 aa11.94□□□□□ -0.5
PCM1-204ENST00000517730 A0A1W2PRF3 423 aa11.94□□□□□ -0.5
PCM1-204ENST00000517730 A0A1W2PRM7 423 aa11.94□□□□□ -0.5
PCM1-204ENST00000517730 K7EIM0 57 aa11.94□□□□□ -0.5
PCM1-204ENST00000517730 K7ERJ3 54 aa11.94□□□□□ -0.5
PCM1-204ENST00000517730 DPM2O94777 84 aa11.94□□□□□ -0.5
PCM1-204ENST00000517730 IL4P05112 153 aa11.94□□□□□ -0.5
PCM1-204ENST00000517730 PRSS1P07477 247 aa11.94□□□□□ -0.5
PCM1-204ENST00000517730 SPATA25Q9BR10 227 aa11.94□□□□□ -0.5
PCM1-204ENST00000517730 NHP2Q9NX24 153 aaKnown RBP11.94□□□□□ -0.5
PCM1-204ENST00000517730 TSSC4Q9Y5U2 329 aaPredicted RBP11.94□□□□□ -0.5
PCM1-204ENST00000517730 SMAGPQ0VAQ4 97 aa11.93□□□□□ -0.5
PCM1-204ENST00000517730 BOD1L1Q8NFC6 3051 aa11.93□□□□□ -0.5
PCM1-204ENST00000517730 KAAG1Q9UBP8 84 aa11.93□□□□□ -0.5
PCM1-204ENST00000517730 PLXNB1O43157 2135 aa11.93□□□□□ -0.5
PCM1-204ENST00000517730 IGHV1-3A0A0C4DH29 117 aa11.93□□□□□ -0.5
PCM1-204ENST00000517730 EGR2P11161 476 aaPredicted RBP11.93□□□□□ -0.5
PCM1-204ENST00000517730 KLF17Q5JT82 389 aaPredicted RBP11.93□□□□□ -0.5
PCM1-204ENST00000517730 TMEM108Q6UXF1 575 aa11.93□□□□□ -0.5
PCM1-204ENST00000517730 PRR25Q96S07 402 aa11.93□□□□□ -0.5
PCM1-204ENST00000517730 RNF5Q99942 180 aa11.93□□□□□ -0.5
PCM1-204ENST00000517730 RAB1BQ9H0U4 201 aa11.93□□□□□ -0.5
PCM1-204ENST00000517730 FBXL15Q9H469 300 aa11.93□□□□□ -0.5
PCM1-204ENST00000517730 CTSZQ9UBR2 303 aa11.93□□□□□ -0.5
PCM1-204ENST00000517730 IGLL5B9A064 214 aa11.92□□□□□ -0.5
PCM1-204ENST00000517730 RNF185Q96GF1 192 aa11.92□□□□□ -0.5
PCM1-204ENST00000517730 CNFNQ9BYD5 112 aa11.92□□□□□ -0.5
PCM1-204ENST00000517730 FAM215AQ9Y5M1 114 aa11.92□□□□□ -0.5
PCM1-204ENST00000517730 ZNF318Q5VUA4 2279 aa11.92□□□□□ -0.5
PCM1-204ENST00000517730 ATP6V0BQ99437 205 aa11.92□□□□□ -0.5
PCM1-204ENST00000517730 ADIPOQQ15848 244 aa11.91□□□□□ -0.5
PCM1-204ENST00000517730 CCL17Q92583 94 aa11.91□□□□□ -0.5
PCM1-204ENST00000517730 ZNF479Q96JC4 524 aa11.91□□□□□ -0.5
PCM1-204ENST00000517730 IGLV1-47P01700 117 aa11.91□□□□□ -0.5
PCM1-204ENST00000517730 KALRNO60229 2985 aa11.9□□□□□ -0.5
PCM1-204ENST00000517730 ABCA1O95477 2261 aa11.9□□□□□ -0.5
PCM1-204ENST00000517730 TNFRSF6BO95407 300 aa11.9□□□□□ -0.5
PCM1-204ENST00000517730 FAM27E3Q08E93 113 aa11.9□□□□□ -0.5
PCM1-204ENST00000517730 WFDC2Q14508 124 aa11.9□□□□□ -0.5
PCM1-204ENST00000517730 ZC2HC1BQ5TFG8 222 aa11.9□□□□□ -0.5
PCM1-204ENST00000517730 C22orf34Q6ZV56 151 aa11.9□□□□□ -0.5
PCM1-204ENST00000517730 GTSCR1Q86UQ5 136 aa11.9□□□□□ -0.5
PCM1-204ENST00000517730 ZNF502Q8TBZ5 544 aa11.9□□□□□ -0.5
PCM1-204ENST00000517730 FOXC2Q99958 501 aa11.9□□□□□ -0.5
PCM1-204ENST00000517730 TTTY13Q9BZ97 58 aa11.9□□□□□ -0.5
PCM1-204ENST00000517730 NPIPB5A8MRT5 1133 aa11.9□□□□□ -0.5
PCM1-204ENST00000517730 BUB1B-PAK6H3BSN5 160 aa11.89□□□□□ -0.51
PCM1-204ENST00000517730 CDX4O14627 284 aaPredicted RBP11.89□□□□□ -0.51
PCM1-204ENST00000517730 CNIH1O95406 144 aa11.89□□□□□ -0.51
PCM1-204ENST00000517730 PRSS33Q8NF86 280 aa11.89□□□□□ -0.51
PCM1-204ENST00000517730 IGKV2-40A0A087WW87 121 aaPredicted RBP11.89□□□□□ -0.51
PCM1-204ENST00000517730 TMEM8BA6NDV4 472 aa11.89□□□□□ -0.51
PCM1-204ENST00000517730 IGKV2D-40P01614 121 aaPredicted RBP11.89□□□□□ -0.51
PCM1-204ENST00000517730 C12orf74Q32Q52 190 aa11.89□□□□□ -0.51
PCM1-204ENST00000517730 Q8N8P6 123 aa11.89□□□□□ -0.51
PCM1-204ENST00000517730 RPL7P18124 248 aaKnown RBP11.88□□□□□ -0.51
PCM1-204ENST00000517730 TMEM158Q8WZ71 300 aa11.88□□□□□ -0.51
PCM1-204ENST00000517730 DMXL2Q8TDJ6 3036 aa11.88□□□□□ -0.51
PCM1-204ENST00000517730 TTC9CQ8N5M4 171 aa11.88□□□□□ -0.51
PCM1-204ENST00000517730 SVIPQ8NHG7 77 aa11.88□□□□□ -0.51
PCM1-204ENST00000517730 ZNF48Q96MX3 618 aaPredicted RBP11.88□□□□□ -0.51
PCM1-204ENST00000517730 SPAG8Q99932 426 aaPredicted RBP11.88□□□□□ -0.51
PCM1-204ENST00000517730 SRSF6Q13247 344 aaKnown RBP11.87□□□□□ -0.51
PCM1-204ENST00000517730 GAGE13Q4V321 117 aa11.87□□□□□ -0.51
PCM1-204ENST00000517730 RPEQ96AT9 228 aa11.87□□□□□ -0.51
PCM1-204ENST00000517730 ZNF80P51504 273 aaPredicted RBP11.87□□□□□ -0.51
PCM1-204ENST00000517730 TECTAO75443 2155 aa11.86□□□□□ -0.51
PCM1-204ENST00000517730 LINC01619G3V211 115 aa11.86□□□□□ -0.51
PCM1-204ENST00000517730 TCTEX1D4Q5JR98 221 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms