RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 TMEM99Q8N816 258 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 Q96M66 194 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 TAAR2Q9P1P5 351 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 TRAV9-1A0A075B6T8 112 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 TRBV7-6A0A0J9YX20 115 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 TEX50A0A1B0GTY4 177 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 TCRBV4S1A1TA0A5B7 111 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 HLA-DQA1P01909 254 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 SLURP2P0DP57 97 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 LAGE3Q14657 143 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 IGFL3Q6UXB1 125 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 C6orf201Q7Z4U5 140 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 Q8N1Y9 231 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 OR8A1Q8NGG7 326 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 PAXXQ9BUH6 204 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 PROK2Q9HC23 129 aa5.58□□□□□ -1.52
NIPBL-208ENST00000514335 RIF1Q5UIP0 2472 aaKnown RBP5.57□□□□□ -1.52
NIPBL-208ENST00000514335 EML5Q05BV3 1969 aa5.57□□□□□ -1.52
NIPBL-208ENST00000514335 AGRNO00468 2067 aa5.57□□□□□ -1.52
NIPBL-208ENST00000514335 COL8A2P25067 703 aa5.57□□□□□ -1.52
NIPBL-208ENST00000514335 CD70P32970 193 aa5.57□□□□□ -1.52
NIPBL-208ENST00000514335 OR10AC1Q8NH08 325 aa5.57□□□□□ -1.52
NIPBL-208ENST00000514335 C4orf45Q96LM5 186 aa5.57□□□□□ -1.52
NIPBL-208ENST00000514335 MCEEQ96PE7 176 aa5.57□□□□□ -1.52
NIPBL-208ENST00000514335 NDUFS7O75251 213 aa5.57□□□□□ -1.52
NIPBL-208ENST00000514335 LEPROTL1O95214 131 aa5.57□□□□□ -1.52
NIPBL-208ENST00000514335 LCE2DQ5TA82 110 aaPredicted RBP5.56□□□□□ -1.52
NIPBL-208ENST00000514335 LINC01545Q5VT33 79 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 FAM57BQ71RH2 274 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 TMEM230Q96A57 120 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 PRSS27Q9BQR3 290 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 V9GY05 133 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 WI2-2373I1.2A0A1W2PRP0 233 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 PRYO14603 147 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 TIMM17BO60830 172 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 GCHFRP30047 84 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 SUPT4H1P63272 117 aaKnown RBP5.56□□□□□ -1.52
NIPBL-208ENST00000514335 ZFP2Q6ZN57 461 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 CHD6Q8TD26 2715 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 FANCD2OSQ96PS1 177 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 KRTAP3-3Q9BYR6 98 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 KRTAP3-2Q9BYR7 98 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 TANC2Q9HCD6 1990 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 X6R8D5 127 aa5.56□□□□□ -1.52
NIPBL-208ENST00000514335 PTPRDP23468 1912 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 TRGV5A0A0B4J1U4 118 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 M0R378 163 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 RBM3P98179 157 aaKnown RBP5.55□□□□□ -1.52
NIPBL-208ENST00000514335 FHL2Q14192 279 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 CST6Q15828 149 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 ZNF627Q7L945 461 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 MYOZ3Q8TDC0 251 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 RNASE6Q93091 150 aaKnown RBP5.55□□□□□ -1.52
NIPBL-208ENST00000514335 IL36BQ9NZH7 164 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 ESPL1Q14674 2120 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 TRBV19A0A075B6N1 114 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 LYRM9A8MSI8 78 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 ATOX1O00244 68 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 SPINK4O60575 86 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 RFPL3SP0C7P2 107 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 TMEM30BQ3MIR4 351 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 S100A7L2Q5SY68 101 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 METTL26Q96S19 204 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 TIMM17AQ99595 171 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 CHAC1Q9BUX1 264 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 Q9H3A6 140 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 FAM60AQ9NP50 221 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 FASNP49327 2511 aaKnown RBP5.55□□□□□ -1.52
NIPBL-208ENST00000514335 NCOR2Q9Y618 2525 aa5.55□□□□□ -1.52
NIPBL-208ENST00000514335 IGHV1-24A0A0C4DH33 117 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 NDUFC2-KCTD14E9PQ53 114 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 J3QRE1 110 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 UPK2O00526 184 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 COX5AP20674 150 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 CFHR3Q02985 330 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 C1orf140Q5VVS0 124 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 CNRIP1Q96F85 164 aaPredicted RBP5.54□□□□□ -1.52
NIPBL-208ENST00000514335 GVINP1Q7Z2Y8 2422 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 PIN1P1O15428 100 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 QRFPP83859 136 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 GDF5OSQ5U4N7 250 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 ZNF645Q8N7E2 425 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 URB1-AS1Q96HZ7 61 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 IGHV1OR15-9A0A0B4J2B8 117 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 C19orf71A6NCJ1 209 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 FFAR1O14842 300 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 CCL16O15467 120 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 PI3P19957 117 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 DAD1P61803 113 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 SFTA2Q6UW10 78 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 TMEM252Q8N6L7 170 aa5.54□□□□□ -1.52
NIPBL-208ENST00000514335 USP24Q9UPU5 2620 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 LINC01619G3V211 115 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 J3QLW9 94 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 WISP3O95389 354 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-208ENST00000514335 IGHG2P01859 326 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 ABCA11PQ4W5N1 156 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 Q6ZS49 121 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 Q8N2B8 174 aa5.53□□□□□ -1.52
NIPBL-208ENST00000514335 NTN5Q8WTR8 489 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms