RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 WNT9BO14905 357 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 AMTP48728 403 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 HSPE1P61604 102 aaKnown RBP5.81□□□□□ -1.48
CLIP1-205ENST00000514271 SPRNQ5BIV9 151 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 SLC25A48Q6ZT89 311 aaKnown RBP5.81□□□□□ -1.48
CLIP1-205ENST00000514271 FNDC4Q9H6D8 234 aaPredicted RBP5.81□□□□□ -1.48
CLIP1-205ENST00000514271 TMEM14CQ9P0S9 112 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 TEX50A0A1B0GTY4 177 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 GNG4P50150 75 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 MFAP2P55001 183 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 SEC11AP67812 179 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 CATR1Q13166 79 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 LDLRAD2Q5SZI1 272 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 MOB3BQ86TA1 216 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 WFDC11Q8NEX6 87 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 IGHV4-61A0A0C4DH41 118 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 GAGE12BA1L429 117 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 RNF223E7ERA6 249 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 CT45A6P0DMU7 189 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 CT45A5P0DMU8 189 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 CT45A7P0DMV0 189 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 HINT1P49773 126 aaPredicted RBP5.8□□□□□ -1.48
CLIP1-205ENST00000514271 CRIP1P50238 77 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 RPL8P62917 257 aaKnown RBP5.8□□□□□ -1.48
CLIP1-205ENST00000514271 PTPN13Q12923 2485 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 C9orf139Q6ZV77 190 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 H2BFWTQ7Z2G1 175 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 GAFA1Q96PS6 74 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 PMCHL2Q9BQD1 86 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 PKDREJQ9NTG1 2253 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 hADV38S2A0JD32 116 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 LINC00479Q96M42 142 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 DCTN5Q9BTE1 182 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 BAHCC1Q9P281 2608 aa5.8□□□□□ -1.48
CLIP1-205ENST00000514271 C7orf71A4D174 169 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 SAA2P0DJI9 122 aaPredicted RBP5.79□□□□□ -1.48
CLIP1-205ENST00000514271 KIAA1644Q3SXP7 199 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 FER1L6-AS1Q8NA97 138 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 OR5AN1Q8NGI8 311 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 CCDC140Q96MF4 163 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 TMEM133Q9H2Q1 129 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 UFC1Q9Y3C8 167 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 LINC00312Q9Y6C7 94 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 LRRK2Q5S007 2527 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 LAMA5O15230 3695 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 NDUFS7O75251 213 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 CA1P00915 261 aaPredicted RBP5.79□□□□□ -1.48
CLIP1-205ENST00000514271 RIPPLY3P57055 190 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 KRTDAPP60985 99 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 CKS1BP61024 79 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 LGALS9BQ3B8N2 356 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 LGALS9CQ6DKI2 356 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 MRAPQ8TCY5 172 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 CR1P17927 2039 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 OR4C46A6NHA9 309 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 PEX7O00628 323 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 TOX4O94842 621 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 C8orf88P0DMB2 117 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 FXYD3Q14802 87 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 RPL39P5Q59GN2 51 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 ASPHD1Q5U4P2 390 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 STHQ8IWL8 128 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 TMEM86BQ8N661 226 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 TM2D2Q9BX73 214 aa5.79□□□□□ -1.48
CLIP1-205ENST00000514271 hDV102S1A0JD36 115 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 TFF1P04155 84 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 C6orf226Q5I0X4 101 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 BAGE3Q86Y29 109 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 BAGE2Q86Y30 109 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 OR4A5Q8NH83 315 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 TRAPPC2LQ9UL33 140 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 OOSP1A8MZH6 123 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 CT45A10P0DMU9 189 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 MYOD1P15172 320 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 AMMECR1LQ6DCA0 310 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 SBSPONQ8IVN8 264 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 LINC00311Q8N616 119 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 MEGF9Q9H1U4 602 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 RPUSD1Q9UJJ7 312 aaKnown RBP5.78□□□□□ -1.48
CLIP1-205ENST00000514271 VPREB3Q9UKI3 123 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 RTTNQ86VV8 2226 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 HIGD1CA8MV81 97 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 FSHBP01225 129 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 SPINK9Q5DT21 86 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 PRR27Q6MZM9 219 aa5.78□□□□□ -1.48
CLIP1-205ENST00000514271 MT-CO2P00403 227 aa5.77□□□□□ -1.49
CLIP1-205ENST00000514271 KRTAP21-3Q3LHN1 58 aa5.77□□□□□ -1.49
CLIP1-205ENST00000514271 C12orf54Q6X4T0 127 aa5.77□□□□□ -1.49
CLIP1-205ENST00000514271 IL1F10Q8WWZ1 152 aa5.77□□□□□ -1.49
CLIP1-205ENST00000514271 CDIP1Q9H305 208 aa5.77□□□□□ -1.49
CLIP1-205ENST00000514271 FLNCQ14315 2725 aa5.77□□□□□ -1.49
CLIP1-205ENST00000514271 TCRBV4S1A1TA0A5B7 111 aa5.77□□□□□ -1.49
CLIP1-205ENST00000514271 F5H768 121 aa5.77□□□□□ -1.49
CLIP1-205ENST00000514271 HBBP68871 147 aa5.77□□□□□ -1.49
CLIP1-205ENST00000514271 WT1-ASQ06250 92 aa5.77□□□□□ -1.49
CLIP1-205ENST00000514271 ZNF826PQ6ZT77 177 aa5.77□□□□□ -1.49
CLIP1-205ENST00000514271 VKORC1L1Q8N0U8 176 aa5.77□□□□□ -1.49
CLIP1-205ENST00000514271 C5orf17Q8NAS9 161 aa5.77□□□□□ -1.49
CLIP1-205ENST00000514271 FMC1Q96HJ9 113 aa5.77□□□□□ -1.49
CLIP1-205ENST00000514271 RPP21Q9H633 154 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms