RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 OR4F5Q8NH21 305 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 USMG5Q96IX5 58 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 C16orf95Q9H693 158 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 SLC25A22Q9H936 323 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 RPRMQ9NS64 109 aa5.3□□□□□ -1.56
RFC1-213ENST00000512275 TRAV30A0A087WSZ9 112 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.29□□□□□ -1.56
RFC1-213ENST00000512275 TRBV7-1A0A0A6YYK4 115 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 A0A0G2JLM5 398 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 CLPSL1A2RUU4 121 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 HMGB3O15347 200 aaKnown RBP5.29□□□□□ -1.56
RFC1-213ENST00000512275 NUPL2O15504 423 aaKnown RBP5.29□□□□□ -1.56
RFC1-213ENST00000512275 COX7A2P2O60397 106 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 SCGB2A1O75556 95 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 FABP1P07148 127 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 CTSGP08311 255 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 NMBP08949 121 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 OR5G3P0C626 314 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 RD3LP0DJH9 198 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 CD28P10747 220 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 ORM2P19652 201 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 FCGR2BP31994 310 aaPredicted RBP5.29□□□□□ -1.56
RFC1-213ENST00000512275 RAB14P61106 215 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 SELENOTP62341 195 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 SERF2P84101 59 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 KIAA0141Q14154 515 aaPredicted RBP5.29□□□□□ -1.56
RFC1-213ENST00000512275 ZNF726P1Q15940 193 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 ACOT6Q3I5F7 207 aaPredicted RBP5.29□□□□□ -1.56
RFC1-213ENST00000512275 TCTEX1D4Q5JR98 221 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 SPATA31B1PQ5VZV4 182 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 COMMD1Q8N668 190 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 ZNF491Q8N8L2 437 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 OR51G1Q8NGK1 321 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 OR1B1Q8NGR6 318 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 MYOZ3Q8TDC0 251 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 TXN2Q99757 166 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 PBDC1Q9BVG4 233 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 KRTAP1-5Q9BYS1 174 aa5.29□□□□□ -1.56
RFC1-213ENST00000512275 JMJD1CQ15652 2540 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 UMAD1C9J7I0 102 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 MBP02144 154 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 IL4P05112 153 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 LGALS1P09382 135 aaKnown RBP5.28□□□□□ -1.56
RFC1-213ENST00000512275 CFC1BP0CG36 223 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 CFC1P0CG37 223 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 M6PRP20645 277 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 CDC34P49427 236 aaPredicted RBP5.28□□□□□ -1.56
RFC1-213ENST00000512275 RAB5CP51148 216 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 FGF8P55075 233 aaPredicted RBP5.28□□□□□ -1.56
RFC1-213ENST00000512275 YPEL3P61236 119 aaPredicted RBP5.28□□□□□ -1.56
RFC1-213ENST00000512275 DEFB136Q30KP8 78 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 C10orf113Q5VZT2 155 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 ZNF343Q6P1L6 599 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 LCN15Q6UWW0 184 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 ZNF600Q6ZNG1 722 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 MIR17HGQ75NE6 70 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 RPP25LQ8N5L8 163 aaKnown RBP5.28□□□□□ -1.56
RFC1-213ENST00000512275 KLHL30-AS1Q8NEE0 82 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 Q8WTZ3 238 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 TMEM37Q8WXS4 190 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 ZNF414Q96IQ9 312 aa5.28□□□□□ -1.56
RFC1-213ENST00000512275 ACTR3CQ9C0K3 210 aaPredicted RBP5.28□□□□□ -1.56
RFC1-213ENST00000512275 PUS1Q9Y606 427 aaKnown RBP eCLIP5.28□□□□□ -1.56
RFC1-213ENST00000512275 NIPBLQ6KC79 2804 aaeCLIP5.28□□□□□ -1.565e-6■□□□□ 8.1
RFC1-213ENST00000512275 A0A087WYN8 130 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 TRAV5A0A0B4J249 113 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 CTXND1A0A1B0GTU2 59 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 A0A1W2PPV4 95 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 MAP1LC3B2A6NCE7 125 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 ZNF207O43670 478 aaKnown RBP5.27□□□□□ -1.57
RFC1-213ENST00000512275 HYPMO75409 117 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 GP9P14770 177 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 RHOBP62745 196 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 USF2Q15853 346 aaPredicted RBP5.27□□□□□ -1.57
RFC1-213ENST00000512275 CLLU1Q5K131 121 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 FAM78BQ5VT40 261 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 TOMM20LQ6UXN7 152 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 PATE2Q6UY27 113 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 DPPA3Q6W0C5 159 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 IQCF2Q8IXL9 164 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 OR1L4Q8NGR5 311 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 SFT2D1Q8WV19 159 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 UBE2E2Q96LR5 201 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 DUX3Q96PT4 197 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 PFDN5Q99471 154 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 NDUFAF3Q9BU61 184 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 C20orf24Q9BUV8 137 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 SCRT1Q9BWW7 348 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 MAP1LC3BQ9GZQ8 125 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 PEF1Q9UBV8 284 aaKnown RBP5.27□□□□□ -1.57
RFC1-213ENST00000512275 FUT9Q9Y231 359 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 HIGD1AQ9Y241 93 aa5.27□□□□□ -1.57
RFC1-213ENST00000512275 IGHV3OR16-13A0A075B7E8 117 aa5.26□□□□□ -1.57
RFC1-213ENST00000512275 IGHV3-49A0A0A0MS15 119 aa5.26□□□□□ -1.57
RFC1-213ENST00000512275 IGHV3-74A0A0B4J1X5 117 aa5.26□□□□□ -1.57
RFC1-213ENST00000512275 IGHV3-38A0A0C4DH36 116 aa5.26□□□□□ -1.57
RFC1-213ENST00000512275 WI2-2373I1.2A0A1W2PRP0 233 aa5.26□□□□□ -1.57
RFC1-213ENST00000512275 SEC14L6B5MCN3 397 aa5.26□□□□□ -1.57
RFC1-213ENST00000512275 GGCTO75223 188 aaKnown RBP5.26□□□□□ -1.57
RFC1-213ENST00000512275 ARL14EPLP0DKL9 152 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms