RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 ZNF689Q96CS4 500 aaPredicted RBP1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 RNF185Q96GF1 192 aa1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 SCGB3A1Q96QR1 104 aa1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 OPRPNQ99935 248 aaPredicted RBP1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 CHCHD5Q9BSY4 110 aa1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 TMEM243Q9BU79 118 aa1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 NHP2Q9NX24 153 aaKnown RBP1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 LSM2Q9Y333 95 aaKnown RBP1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 F11RQ9Y624 299 aaKnown RBP1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 ARL2-SNX15V9GYD0 113 aa1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 PTPRMP28827 1452 aa1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 CPS1P31327 1500 aa1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 MAST1Q9Y2H9 1570 aa1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 DNMT1P26358 1616 aaKnown RBP1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 RAPGEF6Q8TEU7 1601 aa1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 ZNF142P52746 1687 aaPredicted RBP1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 GCC2Q8IWJ2 1684 aa1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 CAMTA1Q9Y6Y1 1673 aa1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 CDC42BPBQ9Y5S2 1711 aa1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 UBR2Q8IWV8 1755 aa1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 ITGB4P16144 1822 aa1.8□□□□□ -2.12
HMGB3P3-201ENST00000510526 NCKAP5O14513 1909 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 PTPRFP10586 1907 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 CHD3Q12873 2000 aaKnown RBP1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 CROCCQ5TZA2 2017 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 TRAV1-1A0A0B4J248 108 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 TRGV8A0A0C4DH27 118 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 A0A0G2JRQ6 117 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 MDFIC2A0A1B0GVS7 189 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 C9JCJ5 164 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 PEX7O00628 323 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 SERF1AO75920 110 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 SLC25A14O95258 325 aaPredicted RBP1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 FSTL3O95633 263 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 LTAP01374 205 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 IGHV4-39P01824 125 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 APCSP02743 223 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 BGLAPP02818 100 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 ASAH2BP0C7U1 165 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 IGHV4-38-2P0DP08 117 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 BTCP35070 178 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 ZNF136P52737 540 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 GNB1P62873 340 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 RPL30P62888 115 aaKnown RBP1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 RBMY1FQ15415 496 aaKnown RBP1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 LPAL2Q16609 132 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 LINC01554Q52M75 96 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 S100A7L2Q5SY68 101 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 Q6P435 159 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 MIR17HGQ75NE6 70 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 PDPNQ86YL7 162 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 ZNF843Q8N446 348 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 TMEM252Q8N6L7 170 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 CHCHD10Q8WYQ3 142 aaPredicted RBP1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 DIRC1Q969H9 104 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 CHCHD1Q96BP2 118 aaKnown RBP1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 LINC01600Q96MT4 127 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 SMIM14Q96QK8 99 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 DSCR8Q96T75 97 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 TXNDC17Q9BRA2 123 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 SCRT1Q9BWW7 348 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 MRPL35Q9NZE8 188 aaKnown RBP1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 GLI2P10070 1586 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 THSD7AQ9UPZ6 1657 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 KIF13BQ9NQT8 1826 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 NUP210LQ5VU65 1888 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 ATG2AQ2TAZ0 1938 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 CITO14578 2027 aa1.79□□□□□ -2.12
HMGB3P3-201ENST00000510526 DOCK3Q8IZD9 2030 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 CCDC88AQ3V6T2 1871 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 NUP210Q8TEM1 1887 aaPredicted RBP1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 ZSWIM8A7E2V4 1837 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 LAMB1P07942 1786 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 COL24A1Q17RW2 1714 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 IFT172Q9UG01 1749 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 MROH2AA6NES4 1674 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 PPRC1Q5VV67 1664 aaKnown RBP1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 ARHGEF5Q12774 1597 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 CDC42BPGQ6DT37 1551 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 IGHV1OR15-1A0A075B7D0 117 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 TRBV5-4A0A0C4DH59 114 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 A0A1B0GWA3 101 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 A0A1W2PNU3 283 aaPredicted RBP1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 hADV29S1A0JD25 119 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 INS-IGF2F8WCM5 200 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 K7ERS5 55 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 FXYD1O00168 92 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 CCL16O15467 120 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 IGKV1-5P01602 117 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 IGHV3-48P01763 117 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 C3orf79P0CE67 100 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 IGHV3-43DP0DP04 118 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 IGHV1-2P23083 117 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 ZNF80P51504 273 aaPredicted RBP1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 KRTAP10-8P60410 259 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 BLCAPP62952 87 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 RBM3P98179 157 aaKnown RBP1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 RPL18Q07020 188 aaKnown RBP1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 FOXF1Q12946 379 aa1.78□□□□□ -2.12
HMGB3P3-201ENST00000510526 IGFBP7Q16270 282 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms