RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 ADIGQ0VDE8 80 aa3.84□□□□□ -1.8
CCDC30-213ENST00000509712 ERCC8Q13216 396 aa3.84□□□□□ -1.8
CCDC30-213ENST00000509712 CST6Q15828 149 aa3.84□□□□□ -1.8
CCDC30-213ENST00000509712 SP6Q3SY56 376 aa3.84□□□□□ -1.8
CCDC30-213ENST00000509712 ABCA11PQ4W5N1 156 aa3.84□□□□□ -1.8
CCDC30-213ENST00000509712 PCP2Q8IVA1 136 aa3.84□□□□□ -1.8
CCDC30-213ENST00000509712 RPRMLQ8N4K4 120 aa3.84□□□□□ -1.8
CCDC30-213ENST00000509712 ZNF525Q8N782 197 aa3.84□□□□□ -1.8
CCDC30-213ENST00000509712 SSMEM1Q8WWF3 244 aa3.84□□□□□ -1.8
CCDC30-213ENST00000509712 TAF15Q92804 592 aaKnown RBP eCLIP3.84□□□□□ -1.8
CCDC30-213ENST00000509712 KLK6Q92876 244 aa3.84□□□□□ -1.8
CCDC30-213ENST00000509712 PAXXQ9BUH6 204 aa3.84□□□□□ -1.8
CCDC30-213ENST00000509712 STARD5Q9NSY2 213 aa3.84□□□□□ -1.8
CCDC30-213ENST00000509712 LSM4Q9Y4Z0 139 aaKnown RBP3.84□□□□□ -1.8
CCDC30-213ENST00000509712 CACNA1IQ9P0X4 2223 aa3.84□□□□□ -1.8
CCDC30-213ENST00000509712 PAPPA2Q9BXP8 1791 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 IGLV3-22A0A075B6J6 115 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 TRBV25-1A0A075B6N4 114 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 H3BMM0 161 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 UPK2O00526 184 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 CCL16O15467 120 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 TCRAP04437 139 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 EFNA4P52798 201 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 ZNF56Q15929 161 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 C1orf140Q5VVS0 124 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 LYZL2Q7Z4W2 148 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 LYPD6Q86Y78 171 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 NT5CQ8TCD5 201 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 C10orf105Q8TEF2 133 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 UBE2WQ96B02 151 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 Q96M85 177 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 ZNF236Q9UL36 1845 aa3.83□□□□□ -1.8
CCDC30-213ENST00000509712 TRPM6Q9BX84 2022 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 KIAA2026Q5HYC2 2103 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 C19orf71A6NCJ1 209 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 TMEM14DPA8MWL7 114 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 WNT9BO14905 357 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 MRPS12O15235 138 aaKnown RBP3.82□□□□□ -1.8
CCDC30-213ENST00000509712 NDUFB3O43676 98 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 NGFP01138 241 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 IFI6P09912 130 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 PCBD1P61457 104 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 HERVK_113P61574 105 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 RPL18Q07020 188 aaKnown RBP3.82□□□□□ -1.8
CCDC30-213ENST00000509712 SLC48A1Q6P1K1 146 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 SDIM1Q6ZPB5 146 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 ODF3L1Q8IXM7 274 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 SLC22A24Q8N4F4 322 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 WFDC11Q8NEX6 87 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 C11orf45Q8TAV5 145 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 LIME1Q9H400 295 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 DYNLRB1Q9NP97 96 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 CALYQ9NYX4 217 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 DOCK4Q8N1I0 1966 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 LCTP09848 1927 aa3.82□□□□□ -1.8
CCDC30-213ENST00000509712 TRBV20OR9-2A0A075B6H5 130 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 TRBV7-3A0A075B6L6 115 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 CPSF4LA6NMK7 179 aaKnown RBP3.81□□□□□ -1.8
CCDC30-213ENST00000509712 HMGN4O00479 90 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 SPRY3O43610 288 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 NDUFS5O43920 106 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 BCE1O60756 84 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 SS18L1O75177 396 aaPredicted RBP3.81□□□□□ -1.8
CCDC30-213ENST00000509712 HBDP02042 147 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 CCL1P22362 96 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 UBE2D1P51668 147 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 SUB1P53999 127 aaKnown RBP eCLIP3.81□□□□□ -1.8
CCDC30-213ENST00000509712 FAM104BQ5XKR9 115 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 EEF1AKMT3Q96AZ1 226 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 ZNF799Q96GE5 643 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 HIST1H4GQ99525 98 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 TM2D3Q9BRN9 247 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 ANAPC1Q9H1A4 1944 aa3.81□□□□□ -1.8
CCDC30-213ENST00000509712 LOC107984156A0A0G2JMH3 177 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 TRBV10-2A0A0K0K1G8 114 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 A0A1B0GXF2 115 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 INAFM1C9JVW0 142 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 SMKR1H3BMG3 65 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 C16orf97H3BN30 126 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 H3BVH4 76 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 K7EMT4 169 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 LGALS3P17931 250 aaKnown RBP3.8□□□□□ -1.8
CCDC30-213ENST00000509712 Q0VFX4 171 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 ZNF816Q0VGE8 651 aaPredicted RBP3.8□□□□□ -1.8
CCDC30-213ENST00000509712 TMEM155Q4W5P6 130 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 SCGB1D4Q6XE38 83 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 LINC00173Q6ZV60 143 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 ARL17AQ8IVW1 177 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 PRR26Q8N8Z3 221 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 LY6G5BQ8NDX9 201 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 ZNF414Q96IQ9 312 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 DEFB127Q9H1M4 99 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 RBM12B-AS1Q9P1G2 102 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 SLC25A15Q9Y619 301 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 SCN10AQ9Y5Y9 1956 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 IGHV4-28A0A0C4DH34 117 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 TMEM202A6NGA9 273 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 CCL21O00585 134 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 SAA4P35542 130 aa3.8□□□□□ -1.8
CCDC30-213ENST00000509712 MFAP2P55001 183 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms