RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 PSG8Q9UQ74 426 aa9.03□□□□□ -0.96
PRPF40B-203ENST00000508736 PAM16Q9Y3D7 125 aa9.03□□□□□ -0.96
PRPF40B-203ENST00000508736 ANKRD17O75179 2603 aaKnown RBP9.03□□□□□ -0.96
PRPF40B-203ENST00000508736 NAV2Q8IVL1 2488 aa9.02□□□□□ -0.96
PRPF40B-203ENST00000508736 A0A1B0GW15 77 aa9.02□□□□□ -0.96
PRPF40B-203ENST00000508736 FBLL1A6NHQ2 334 aaKnown RBP9.02□□□□□ -0.96
PRPF40B-203ENST00000508736 CT45A10P0DMU9 189 aa9.02□□□□□ -0.96
PRPF40B-203ENST00000508736 Q6AWC8 147 aa9.02□□□□□ -0.96
PRPF40B-203ENST00000508736 C16orf54Q6UWD8 224 aa9.02□□□□□ -0.96
PRPF40B-203ENST00000508736 NIT1Q86X76 327 aa9.02□□□□□ -0.96
PRPF40B-203ENST00000508736 ARL6IP6Q8N6S5 226 aa9.02□□□□□ -0.96
PRPF40B-203ENST00000508736 FAM110DQ8TAY7 271 aaPredicted RBP9.02□□□□□ -0.96
PRPF40B-203ENST00000508736 BEX4Q9NWD9 120 aaPredicted RBP9.02□□□□□ -0.96
PRPF40B-203ENST00000508736 S4R3C0 116 aa9.02□□□□□ -0.96
PRPF40B-203ENST00000508736 A0A1B0GV90 55 aa9.02□□□□□ -0.97
PRPF40B-203ENST00000508736 M0QZK8 103 aa9.02□□□□□ -0.97
PRPF40B-203ENST00000508736 M0R2Z0 102 aa9.02□□□□□ -0.97
PRPF40B-203ENST00000508736 HAX1O00165 279 aa9.02□□□□□ -0.97
PRPF40B-203ENST00000508736 CYB5R2Q6BCY4 276 aa9.02□□□□□ -0.97
PRPF40B-203ENST00000508736 ZC2HC1AQ96GY0 325 aa9.02□□□□□ -0.97
PRPF40B-203ENST00000508736 RABAC1Q9UI14 185 aa9.02□□□□□ -0.97
PRPF40B-203ENST00000508736 ABCA2Q9BZC7 2435 aa9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 TRAV40A0A0B4J280 105 aa9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 A0A1B0GUT8 65 aa9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 F8W735 103 aaPredicted RBP9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 NDUFB8O95169 186 aa9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 C3orf79P0CE67 100 aa9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 FOXA3P55318 350 aaPredicted RBP9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 SSTP61278 116 aa9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 RIGQ13278 110 aa9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 DMRTA1Q5VZB9 504 aa9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 ZNF705AQ6ZN79 300 aaPredicted RBP9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 FAM19A2Q8N3H0 131 aa9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 C5orf56Q8N8D9 126 aa9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 CHCHD1Q96BP2 118 aaKnown RBP9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 C17orf77Q96MU5 243 aa9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 PDZD2O15018 2839 aa9.01□□□□□ -0.97
PRPF40B-203ENST00000508736 EREGO14944 169 aa9□□□□□ -0.97
PRPF40B-203ENST00000508736 PMCHL1Q16048 86 aa9□□□□□ -0.97
PRPF40B-203ENST00000508736 Q8N976 141 aa9□□□□□ -0.97
PRPF40B-203ENST00000508736 PIFOQ8TCI5 191 aa9□□□□□ -0.97
PRPF40B-203ENST00000508736 MOB4Q9Y3A3 225 aa9□□□□□ -0.97
PRPF40B-203ENST00000508736 RNF114Q9Y508 228 aa9□□□□□ -0.97
PRPF40B-203ENST00000508736 LOC102724200A0A096LPH7 203 aaPredicted RBP9□□□□□ -0.97
PRPF40B-203ENST00000508736 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9□□□□□ -0.97
PRPF40B-203ENST00000508736 FAM181BA6NEQ2 426 aa9□□□□□ -0.97
PRPF40B-203ENST00000508736 OR2T8A6NH00 312 aa9□□□□□ -0.97
PRPF40B-203ENST00000508736 RAB9AP51151 201 aa9□□□□□ -0.97
PRPF40B-203ENST00000508736 CRIP2P52943 208 aaPredicted RBP9□□□□□ -0.97
PRPF40B-203ENST00000508736 NDFIP1Q9BT67 221 aa9□□□□□ -0.97
PRPF40B-203ENST00000508736 A0A096LNT2 108 aa8.99□□□□□ -0.97
PRPF40B-203ENST00000508736 SH2D7A6NKC9 451 aaPredicted RBP8.99□□□□□ -0.97
PRPF40B-203ENST00000508736 ATP6V0E1O15342 81 aa8.99□□□□□ -0.97
PRPF40B-203ENST00000508736 BTF3P20290 206 aaKnown RBP8.99□□□□□ -0.97
PRPF40B-203ENST00000508736 TDRG1Q3Y452 100 aa8.99□□□□□ -0.97
PRPF40B-203ENST00000508736 SPATA45Q537H7 98 aa8.99□□□□□ -0.97
PRPF40B-203ENST00000508736 UNQ5815/PRO19632Q6UWF5 114 aa8.99□□□□□ -0.97
PRPF40B-203ENST00000508736 LRRC75A-AS1Q8N1F1 130 aa8.99□□□□□ -0.97
PRPF40B-203ENST00000508736 KLHDC1Q8N7A1 406 aa8.99□□□□□ -0.97
PRPF40B-203ENST00000508736 TMUB1Q9BVT8 246 aa8.99□□□□□ -0.97
PRPF40B-203ENST00000508736 SNHG12Q9BXW3 62 aa8.99□□□□□ -0.97
PRPF40B-203ENST00000508736 NOTCH2Q04721 2471 aa8.99□□□□□ -0.97
PRPF40B-203ENST00000508736 SVEP1Q4LDE5 3571 aa8.99□□□□□ -0.97
PRPF40B-203ENST00000508736 CSMD1Q96PZ7 3565 aa8.99□□□□□ -0.97
PRPF40B-203ENST00000508736 M0R3E3 92 aa8.98□□□□□ -0.97
PRPF40B-203ENST00000508736 CTSGP08311 255 aa8.98□□□□□ -0.97
PRPF40B-203ENST00000508736 IGHV4-38-2P0DP08 117 aa8.98□□□□□ -0.97
PRPF40B-203ENST00000508736 SAPCD1Q5SSQ6 148 aa8.98□□□□□ -0.97
PRPF40B-203ENST00000508736 BRD3OSQ6XYD6 125 aa8.98□□□□□ -0.97
PRPF40B-203ENST00000508736 HIF1ANQ9NWT6 349 aa8.98□□□□□ -0.97
PRPF40B-203ENST00000508736 J3QLI3 93 aa8.98□□□□□ -0.97
PRPF40B-203ENST00000508736 IGHV3-23P01764 117 aa8.98□□□□□ -0.97
PRPF40B-203ENST00000508736 APOHP02749 345 aaPredicted RBP8.98□□□□□ -0.97
PRPF40B-203ENST00000508736 ECSCRQ19T08 205 aa8.98□□□□□ -0.97
PRPF40B-203ENST00000508736 LINC01356Q8N9X3 169 aa8.98□□□□□ -0.97
PRPF40B-203ENST00000508736 GATD1Q8NB37 220 aa8.98□□□□□ -0.97
PRPF40B-203ENST00000508736 ATP6V0BQ99437 205 aa8.98□□□□□ -0.97
PRPF40B-203ENST00000508736 C20orf202A1L168 122 aa8.97□□□□□ -0.97
PRPF40B-203ENST00000508736 CTRLP40313 264 aa8.97□□□□□ -0.97
PRPF40B-203ENST00000508736 NUTF2P61970 127 aaKnown RBP8.97□□□□□ -0.97
PRPF40B-203ENST00000508736 LOXL1Q08397 574 aaPredicted RBP8.97□□□□□ -0.97
PRPF40B-203ENST00000508736 C15orf32Q32M92 178 aa8.97□□□□□ -0.97
PRPF40B-203ENST00000508736 Q5PR19 223 aa8.97□□□□□ -0.97
PRPF40B-203ENST00000508736 ZNF502Q8TBZ5 544 aa8.97□□□□□ -0.97
PRPF40B-203ENST00000508736 UQCR10Q9UDW1 63 aa8.97□□□□□ -0.97
PRPF40B-203ENST00000508736 IGHV3OR16-10A0A075B7F0 116 aa8.96□□□□□ -0.97
PRPF40B-203ENST00000508736 TMEM189A5PLL7 270 aa8.96□□□□□ -0.97
PRPF40B-203ENST00000508736 BRI3O95415 125 aa8.96□□□□□ -0.97
PRPF40B-203ENST00000508736 OR5AL1P0C617 328 aa8.96□□□□□ -0.97
PRPF40B-203ENST00000508736 GPR183P32249 361 aa8.96□□□□□ -0.97
PRPF40B-203ENST00000508736 RHOGP84095 191 aa8.96□□□□□ -0.97
PRPF40B-203ENST00000508736 C19orf54Q5BKX5 351 aa8.96□□□□□ -0.97
PRPF40B-203ENST00000508736 COX8CQ7Z4L0 72 aa8.96□□□□□ -0.97
PRPF40B-203ENST00000508736 BCL6BQ8N143 479 aaPredicted RBP8.96□□□□□ -0.97
PRPF40B-203ENST00000508736 CCDC168Q8NDH2 2452 aa8.96□□□□□ -0.97
PRPF40B-203ENST00000508736 A6NDX4 124 aa8.96□□□□□ -0.98
PRPF40B-203ENST00000508736 ARMS2P0C7Q2 107 aa8.96□□□□□ -0.98
PRPF40B-203ENST00000508736 RPS20P60866 119 aaKnown RBP8.96□□□□□ -0.98
PRPF40B-203ENST00000508736 C8orf49Q96NF6 230 aa8.96□□□□□ -0.98
PRPF40B-203ENST00000508736 FOXC2Q99958 501 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms