RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 M0R1X1 148 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 NDUFA4O00483 81 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 OR7C2O60412 319 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 SC5DO75845 299 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 ISG15P05161 165 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 CTSGP08311 255 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 RRM2P31350 389 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 POLR2IP36954 125 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 MAP2K4P45985 399 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 UBE2KP61086 200 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 HMGN3Q15651 99 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 PSMG4Q5JS54 123 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 TMEM236Q5W0B7 351 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 OR10K2Q6IF99 312 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 MRPL55Q7Z7F7 128 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 PDPNQ86YL7 162 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 WFDC10BQ8IUB3 73 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 PXT1Q8NFP0 134 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 OR52N1Q8NH53 320 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 RXFP4Q8TDU9 374 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 NEK7Q8TDX7 302 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 TNFAIP8L1Q8WVP5 186 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 TBX5Q99593 518 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 NIPSNAP1Q9BPW8 284 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 PAIP2Q9BPZ3 127 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 VSIRQ9H7M9 311 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 RHOFQ9HBH0 211 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 RABAC1Q9UI14 185 aa1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 RRP15Q9Y3B9 282 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-206ENST00000508524 SMIM9A6NGZ8 99 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 K7EIM0 57 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 MRASO14807 208 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 CRYZL1O95825 349 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 SERPINA3P01011 423 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 IFNGP01579 166 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 ATP5G1P05496 136 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 GNRHRP30968 328 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 ATP5G3P48201 142 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 TNFAIP8L3Q5GJ75 292 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 RPL13AP3Q6NVV1 102 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 OR10W1Q8NGF6 305 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 APH1BQ8WW43 257 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 ASB17Q8WXJ9 295 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 DGCR14Q96DF8 476 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 GNPNAT1Q96EK6 184 aaPredicted RBP1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 FAM192AQ9GZU8 254 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 EXTL2Q9UBQ6 330 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 BAIAP2Q9UQB8 552 aa1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 FAM32AQ9Y421 112 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 V9GYY5 206 aaPredicted RBP1.72□□□□□ -2.13
TOPBP1-206ENST00000508524 TRAV2A0A0B4J234 112 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 TRAV3A0A0B4J244 114 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 OR4C45A6NMZ5 311 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 H7C1H1 209 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 TAAR5O14804 337 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 ATP8B1O43520 1251 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 DENRO43583 198 aaKnown RBP1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 HBE1P02100 147 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 APOA2P02652 100 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 SERPINE2P07093 398 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 HLA-DRB4P13762 266 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 M6PRP20645 277 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 TALDO1P37837 337 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 RPL27AP46776 148 aaKnown RBP1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 RPL30P62888 115 aaKnown RBP1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 CDK10Q15131 360 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 RSU1Q15404 277 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 LUZP6Q538Z0 58 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 NXNL2Q5VZ03 156 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 TOMM20LQ6UXN7 152 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 TMED4Q7Z7H5 227 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 UBAC2Q8NBM4 344 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 GALMQ96C23 342 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 BANF2Q9H503 90 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 SDHAF2Q9NX18 166 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 AP3M1Q9Y2T2 418 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 HLA-DRB4X5D2U9 266 aa1.71□□□□□ -2.14
TOPBP1-206ENST00000508524 TRAV14DV4A0A0A6YYC5 116 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 METTL15A6NJ78 407 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 MCRIP1C9JLW8 97 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 ITGB1BP1O14713 200 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 CRXO43186 299 aaPredicted RBP1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 OCM2P0CE71 109 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 OCMP0CE72 109 aaPredicted RBP1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 UBCP0CG48 685 aaKnown RBP1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 CASQ1P31415 396 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 IFNGR2P38484 337 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 KRTAP12-1P59990 96 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 WT1-ASQ06250 92 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 ZNF266Q14584 549 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 RRN3P1Q2M238 152 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 MPV17LQ2QL34 196 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 VMA21Q3ZAQ7 101 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 OGFRL1Q5TC84 451 aaPredicted RBP1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 GLT8D1Q68CQ7 371 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 ZNF773Q6PK81 442 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 AMTNQ6UX39 209 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 IFT20Q8IY31 132 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 HS3ST5Q8IZT8 346 aa1.7□□□□□ -2.14
TOPBP1-206ENST00000508524 STX19Q8N4C7 294 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms