RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 CD177Q8N6Q3 437 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 PRR25Q96S07 402 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 MEGF9Q9H1U4 602 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 ST20Q9HBF5 79 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 SPTBN5Q9NRC6 3674 aaKnown RBP2.38□□□□□ -2.03
NEDD4-208ENST00000508342 FCN3O75636 299 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 FAM90A2PQ658T7 463 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 ZNF880Q6PDB4 577 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 RASL11AQ6T310 242 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 C1orf158Q8N1D5 194 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 CACNG8Q8WXS5 425 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 Q96M66 194 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 SCGB3A1Q96QR1 104 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 NABP2Q9BQ15 211 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 MRPL16Q9NX20 251 aaKnown RBP2.38□□□□□ -2.03
NEDD4-208ENST00000508342 IGKV2D-24A0A075B6R9 120 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 FAM90A26D6RGX4 464 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 F8W735 103 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-208ENST00000508342 VSIG8P0DPA2 414 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 FSTP19883 344 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 GATA2P23769 480 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-208ENST00000508342 MYCNOSP40205 109 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 HILS1P60008 231 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 ARTNQ5T4W7 220 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 C11orf71Q6IPW1 123 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 RNF182Q8N6D2 247 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 VN1R17PQ8TDU5 208 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 C20orf173Q96LM9 149 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 RNF167Q9H6Y7 350 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 MAST4O15021 2626 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 RBFOX3A6NFN3 312 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 SRRM4A7MD48 611 aaKnown RBP2.38□□□□□ -2.03
NEDD4-208ENST00000508342 BCL2L11O43521 198 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 MPC2O95563 127 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 SEC11AP67812 179 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 IFITM2Q01629 132 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 VAX1Q5SQQ9 334 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 PVRIGQ6DKI7 326 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 SUMO4Q6EEV6 95 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 MORN3Q6PF18 240 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-208ENST00000508342 OR10AG1Q8NH19 301 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 PIFOQ8TCI5 191 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 GGTLC1Q9BX51 225 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 TM2D2Q9BX73 214 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 EPG5Q9HCE0 2579 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 C7orf71A4D174 169 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 PAX2Q02962 417 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 FOXE3Q13461 319 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 C12orf73Q69YU5 71 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 Q8N1Y9 231 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 PTH2Q96A98 100 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 OR5AC2Q9NZP5 309 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 CARHSP1Q9Y2V2 147 aaKnown RBP2.37□□□□□ -2.03
NEDD4-208ENST00000508342 LSM4Q9Y4Z0 139 aaKnown RBP2.37□□□□□ -2.03
NEDD4-208ENST00000508342 TNRC18O15417 2968 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-208ENST00000508342 SAA2-SAA4A0A096LPE2 208 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 APOHP02749 345 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-208ENST00000508342 DANCRP0C864 163 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 SAA2P0DJI9 122 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-208ENST00000508342 SLURP1P55000 103 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 RUNX1Q01196 453 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 LYZL4Q96KX0 146 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 RARRES2Q99969 163 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 DAZ1Q9NQZ3 744 aaKnown RBP2.37□□□□□ -2.03
NEDD4-208ENST00000508342 AURKAIP1Q9NWT8 199 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-208ENST00000508342 IGKV1OR2-108A0A075B7D4 117 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 A0A0U1RQV1 116 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 A0A0U1RRA0 63 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 GGTLC3B5MD39 225 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 SPRY2O43597 315 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 SMIM13P0DJ93 91 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 ERCC8Q13216 396 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 SPRNQ5BIV9 151 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 C1orf194Q5T5A4 169 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 HIST2H2BDQ6DRA6 164 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 C8orf82Q6P1X6 216 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-208ENST00000508342 DPPA3Q6W0C5 159 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 HOGA1Q86XE5 327 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 THAP8Q8NA92 274 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 HIST1H2BAQ96A08 127 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 TRAV12-3A0A0B4J271 114 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 PGLYRP1O75594 196 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-208ENST00000508342 NCR2O95944 276 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 PLNP26678 52 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 EWSR1Q01844 656 aaKnown RBP eCLIP2.37□□□□□ -2.03
NEDD4-208ENST00000508342 CDPF1Q6NVV7 123 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 OR52E5Q8NH55 327 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 SPATA25Q9BR10 227 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 IGHV3-73A0A0B4J1V6 119 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 IGLL5B9A064 214 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 NDUFB4O95168 129 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 CFHR3Q02985 330 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 KLF17Q5JT82 389 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-208ENST00000508342 FER1L6-AS1Q8NA97 138 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 OR10W1Q8NGF6 305 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 RHPN1-AS1Q9BWJ2 59 aa2.37□□□□□ -2.03
NEDD4-208ENST00000508342 GRIFINA4D1Z8 144 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 ZNF503-AS2A6NEH8 195 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 C12orf77C9JDV5 145 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 UPK2O00526 184 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms