RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 FABP1P07148 127 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 CXCL1P09341 107 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 ZNF25P17030 456 aaPredicted RBP0.56□□□□□ -2.32
GYPB-207ENST00000506679 GLRXP35754 106 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 TFAMQ00059 246 aaKnown RBP0.56□□□□□ -2.32
GYPB-207ENST00000506679 CIRBPQ14011 172 aaKnown RBP0.56□□□□□ -2.32
GYPB-207ENST00000506679 LTC4SQ16873 150 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 C1orf134Q5TEV5 83 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 HAGHLQ6PII5 290 aaPredicted RBP0.56□□□□□ -2.32
GYPB-207ENST00000506679 ANGPTL5Q86XS5 388 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 LRRC18Q8N456 261 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 PLPP5Q8NEB5 264 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 CCDC32Q9BV29 185 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 TCEAL2Q9H3H9 227 aaPredicted RBP0.56□□□□□ -2.32
GYPB-207ENST00000506679 TAS2R7Q9NYW3 318 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 TNFSF18Q9UNG2 199 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 C22orf24Q9Y442 160 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 USP9XQ93008 2570 aaPredicted RBP0.56□□□□□ -2.32
GYPB-207ENST00000506679 CHD8Q9HCK8 2581 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 MYO18AQ92614 2054 aaKnown RBP0.56□□□□□ -2.32
GYPB-207ENST00000506679 KMT2DO14686 5537 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 HEATR1Q9H583 2144 aaKnown RBP0.56□□□□□ -2.32
GYPB-207ENST00000506679 RFX7Q2KHR2 1363 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 RTL9Q8NET4 1388 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 PBRM1Q86U86 1689 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 TRAPPC8Q9Y2L5 1435 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 COL24A1Q17RW2 1714 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 CECR2Q9BXF3 1484 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 NCOA6Q14686 2063 aaPredicted RBP0.55□□□□□ -2.32
GYPB-207ENST00000506679 MDN1Q9NU22 5596 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 B4DSR2 109 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 KPNA4O00629 521 aaPredicted RBP0.55□□□□□ -2.32
GYPB-207ENST00000506679 DNAL4O96015 105 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 CD2P06729 351 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 BCL2P10415 239 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 MRPS36P82909 103 aaKnown RBP0.55□□□□□ -2.32
GYPB-207ENST00000506679 PSG9Q00887 426 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 MSMO1Q15800 293 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 GKN2Q86XP6 184 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 FAM216BQ8N7L0 139 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 BORCS8Q96FH0 119 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 AMELYQ99218 206 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 SELENOSQ9BQE4 189 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 TMEM138Q9NPI0 162 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 NAT8BQ9UHF3 227 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 SMPXQ9UHP9 88 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 TECPR2O15040 1411 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 KIAA1107Q9UPP5 1409 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 EPPK1P58107 5090 aaKnown RBP0.55□□□□□ -2.32
GYPB-207ENST00000506679 ABCA13Q86UQ4 5058 aa0.55□□□□□ -2.32
GYPB-207ENST00000506679 MUC5ACP98088 5654 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 TENM3Q9P273 2699 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 E9PCH4 1651 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 TRDV1A0A1B0GX56 115 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 A0A1W2PRE2 83 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 ODAMA1E959 279 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 K7ERJ3 54 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 IFNA21P01568 189 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 FREM3P0C091 2139 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 NDUFA6P56556 154 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 EIF3IQ13347 325 aaKnown RBP0.54□□□□□ -2.32
GYPB-207ENST00000506679 TOMM20LQ6UXN7 152 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 SMIM15Q7Z3B0 74 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 OR4B1Q8NGF8 309 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 Q8TAT8 98 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 GGACTQ9BVM4 153 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 DDA1Q9BW61 102 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 LRTM1Q9HBL6 345 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 OTORQ9NRC9 128 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 RNF11Q9Y3C5 154 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 ASB4Q9Y574 426 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 RYR3Q15413 4870 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 SSPOA2VEC9 5147 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 MGAMO43451 1857 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 ANKHD1Q8IWZ3 2542 aaKnown RBP0.54□□□□□ -2.32
GYPB-207ENST00000506679 NCOR2Q9Y618 2525 aa0.54□□□□□ -2.32
GYPB-207ENST00000506679 FRMPD1Q5SYB0 1578 aa0.53□□□□□ -2.32
GYPB-207ENST00000506679 SETXQ7Z333 2677 aaKnown RBP0.53□□□□□ -2.32
GYPB-207ENST00000506679 A0A096LPI6 279 aa0.53□□□□□ -2.32
GYPB-207ENST00000506679 PGRMC1O00264 195 aaKnown RBP0.53□□□□□ -2.32
GYPB-207ENST00000506679 NCR3O14931 201 aa0.53□□□□□ -2.32
GYPB-207ENST00000506679 MT-ND6P03923 174 aa0.53□□□□□ -2.32
GYPB-207ENST00000506679 PRB4P10163 310 aaPredicted RBP0.53□□□□□ -2.32
GYPB-207ENST00000506679 SDC2P34741 201 aa0.53□□□□□ -2.32
GYPB-207ENST00000506679 SRP9P49458 86 aaKnown RBP0.53□□□□□ -2.32
GYPB-207ENST00000506679 KRTAP20-1Q3LI63 56 aa0.53□□□□□ -2.32
GYPB-207ENST00000506679 TMEM14EPQ6UXP3 125 aa0.53□□□□□ -2.32
GYPB-207ENST00000506679 OR9Q1Q8NGQ5 310 aa0.53□□□□□ -2.32
GYPB-207ENST00000506679 DIRC1Q969H9 104 aa0.53□□□□□ -2.32
GYPB-207ENST00000506679 CARD19Q96LW7 228 aa0.53□□□□□ -2.32
GYPB-207ENST00000506679 LXNQ9BS40 222 aa0.53□□□□□ -2.32
GYPB-207ENST00000506679 CST11Q9H112 138 aa0.53□□□□□ -2.32
GYPB-207ENST00000506679 TPRKBQ9Y3C4 175 aa0.53□□□□□ -2.32
GYPB-207ENST00000506679 EML5Q05BV3 1969 aa0.53□□□□□ -2.32
GYPB-207ENST00000506679 RNF213Q63HN8 5207 aa0.53□□□□□ -2.33
GYPB-207ENST00000506679 TTC28Q96AY4 2481 aa0.53□□□□□ -2.33
GYPB-207ENST00000506679 MAST4O15021 2626 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 LAMA4Q16363 1823 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 PTPRDP23468 1912 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 JMJD1CQ15652 2540 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms