RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 ABCA2Q9BZC7 2435 aa-0.56□□□□□ -2.5
SMN2-205ENST00000505346 TRPM1Q7Z4N2 1603 aa-0.56□□□□□ -2.5
SMN2-205ENST00000505346 CACNA1AO00555 2505 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 ADCY9O60503 1353 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 ATG2AQ2TAZ0 1938 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 A0A1W2PRS3 328 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 FAM159BA6NKW6 160 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 HMGB3O15347 200 aaKnown RBP-0.57□□□□□ -2.5
SMN2-205ENST00000505346 RPP14O95059 124 aaKnown RBP-0.57□□□□□ -2.5
SMN2-205ENST00000505346 IFNA7P01567 189 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 IDO1P14902 403 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 NFYBP25208 207 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 INSL3P51460 131 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 TMBIM6P55061 237 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 MYL6P60660 151 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 TAF1AQ15573 450 aaPredicted RBP-0.57□□□□□ -2.5
SMN2-205ENST00000505346 SPINK13Q1W4C9 94 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 GOLT1AQ6ZVE7 132 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 LINC00208Q96KT6 92 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 CACYBPQ9HB71 228 aaKnown RBP-0.57□□□□□ -2.5
SMN2-205ENST00000505346 TRPM7Q96QT4 1865 aa-0.57□□□□□ -2.5
SMN2-205ENST00000505346 A0A0J9YY99 117 aa-0.58□□□□□ -2.5
SMN2-205ENST00000505346 PRORSD1PA6NEY8 169 aa-0.58□□□□□ -2.5
SMN2-205ENST00000505346 SMIM23A6NLE4 172 aa-0.58□□□□□ -2.5
SMN2-205ENST00000505346 BANF1O75531 89 aa-0.58□□□□□ -2.5
SMN2-205ENST00000505346 CYBAP13498 195 aa-0.58□□□□□ -2.5
SMN2-205ENST00000505346 ZNF56Q15929 161 aa-0.58□□□□□ -2.5
SMN2-205ENST00000505346 KRTAP19-8Q3LI54 63 aa-0.58□□□□□ -2.5
SMN2-205ENST00000505346 U3KQA8 63 aa-0.58□□□□□ -2.5
SMN2-205ENST00000505346 JMJD1CQ15652 2540 aa-0.58□□□□□ -2.5
SMN2-205ENST00000505346 ADGRL3Q9HAR2 1447 aa-0.58□□□□□ -2.5
SMN2-205ENST00000505346 FAM208BQ5VWN6 2430 aa-0.58□□□□□ -2.5
SMN2-205ENST00000505346 ABCA1O95477 2261 aa-0.59□□□□□ -2.5
SMN2-205ENST00000505346 RER1O15258 196 aa-0.59□□□□□ -2.5
SMN2-205ENST00000505346 MSMO1Q15800 293 aa-0.59□□□□□ -2.5
SMN2-205ENST00000505346 XAF1Q6GPH4 301 aa-0.59□□□□□ -2.5
SMN2-205ENST00000505346 OR8J2Q8NGG1 315 aa-0.59□□□□□ -2.5
SMN2-205ENST00000505346 ENY2Q9NPA8 101 aa-0.59□□□□□ -2.5
SMN2-205ENST00000505346 FAM32AQ9Y421 112 aaKnown RBP-0.59□□□□□ -2.5
SMN2-205ENST00000505346 ANK1P16157 1881 aa-0.59□□□□□ -2.5
SMN2-205ENST00000505346 ESPL1Q14674 2120 aa-0.59□□□□□ -2.5
SMN2-205ENST00000505346 TANC1Q9C0D5 1861 aa-0.6□□□□□ -2.51
SMN2-205ENST00000505346 SULT1C4O75897 302 aa-0.6□□□□□ -2.51
SMN2-205ENST00000505346 ITGB3BPQ13352 177 aaPredicted RBP-0.6□□□□□ -2.51
SMN2-205ENST00000505346 DIAPH2-AS1Q14236 149 aa-0.6□□□□□ -2.51
SMN2-205ENST00000505346 NEDD8Q15843 81 aa-0.6□□□□□ -2.51
SMN2-205ENST00000505346 VMO1Q7Z5L0 202 aa-0.6□□□□□ -2.51
SMN2-205ENST00000505346 LINC00269Q8N2A0 174 aa-0.6□□□□□ -2.51
SMN2-205ENST00000505346 OR10X1Q8NGY0 326 aa-0.6□□□□□ -2.51
SMN2-205ENST00000505346 NAT8BQ9UHF3 227 aa-0.6□□□□□ -2.51
SMN2-205ENST00000505346 PCF11O94913 1555 aaKnown RBP-0.61□□□□□ -2.51
SMN2-205ENST00000505346 AFDNP55196 1824 aaKnown RBP-0.61□□□□□ -2.51
SMN2-205ENST00000505346 RYR3Q15413 4870 aa-0.61□□□□□ -2.51
SMN2-205ENST00000505346 A6NN06 94 aa-0.61□□□□□ -2.51
SMN2-205ENST00000505346 EVI2AP22794 236 aa-0.61□□□□□ -2.51
SMN2-205ENST00000505346 RPS3P23396 243 aaKnown RBP eCLIP-0.61□□□□□ -2.51
SMN2-205ENST00000505346 CEBPGP53567 150 aa-0.61□□□□□ -2.51
SMN2-205ENST00000505346 VMA21Q3ZAQ7 101 aa-0.61□□□□□ -2.51
SMN2-205ENST00000505346 LIN52Q52LA3 116 aa-0.61□□□□□ -2.51
SMN2-205ENST00000505346 PTRHD1Q6GMV3 140 aaKnown RBP-0.61□□□□□ -2.51
SMN2-205ENST00000505346 CST11Q9H112 138 aa-0.61□□□□□ -2.51
SMN2-205ENST00000505346 NISCHQ9Y2I1 1504 aa-0.61□□□□□ -2.51
SMN2-205ENST00000505346 CREBBPQ92793 2442 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 HERC2O95714 4834 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 HERC1Q15751 4861 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 LOC107984156A0A0G2JMH3 177 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 NBDYA0A0U1RRE5 68 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 IGHV3-30P01768 117 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 IGHV3-30-5P0DP03 117 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 NCALDP61601 193 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 FXYD3Q14802 87 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 ARL17AQ8IVW1 177 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 BTF3L4Q96K17 158 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 PRAP1Q96NZ9 151 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 MAP1LC3BQ9GZQ8 125 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 NMNAT1Q9HAN9 279 aaPredicted RBP-0.62□□□□□ -2.51
SMN2-205ENST00000505346 KIAA1549LQ6ZVL6 1849 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 ZANQ9Y493 2812 aa-0.62□□□□□ -2.51
SMN2-205ENST00000505346 DSPPQ9NZW4 1301 aa-0.63□□□□□ -2.51
SMN2-205ENST00000505346 TMEM114B3SHH9 223 aa-0.63□□□□□ -2.51
SMN2-205ENST00000505346 LYRM1O43325 122 aa-0.63□□□□□ -2.51
SMN2-205ENST00000505346 NIPSNAP2O75323 286 aa-0.63□□□□□ -2.51
SMN2-205ENST00000505346 PIAS1O75925 651 aa-0.63□□□□□ -2.51
SMN2-205ENST00000505346 C1QBP02746 253 aa-0.63□□□□□ -2.51
SMN2-205ENST00000505346 CSAG1Q6PB30 78 aa-0.63□□□□□ -2.51
SMN2-205ENST00000505346 IFT20Q8IY31 132 aa-0.63□□□□□ -2.51
SMN2-205ENST00000505346 C5orf17Q8NAS9 161 aa-0.63□□□□□ -2.51
SMN2-205ENST00000505346 PLB1Q6P1J6 1458 aa-0.63□□□□□ -2.51
SMN2-205ENST00000505346 USH2AO75445 5202 aa-0.63□□□□□ -2.51
SMN2-205ENST00000505346 MYO7AQ13402 2215 aa-0.64□□□□□ -2.51
SMN2-205ENST00000505346 LOC101927531A0A1B0GV80 90 aa-0.64□□□□□ -2.51
SMN2-205ENST00000505346 HIST1H2BKO60814 126 aa-0.64□□□□□ -2.51
SMN2-205ENST00000505346 TRGC2P03986 189 aa-0.64□□□□□ -2.51
SMN2-205ENST00000505346 IFNA4P05014 189 aa-0.64□□□□□ -2.51
SMN2-205ENST00000505346 HIST1H2BJP06899 126 aa-0.64□□□□□ -2.51
SMN2-205ENST00000505346 FAM216BQ8N7L0 139 aa-0.64□□□□□ -2.51
SMN2-205ENST00000505346 C5orf56Q8N8D9 126 aa-0.64□□□□□ -2.51
SMN2-205ENST00000505346 PPP1R14BQ96C90 147 aa-0.64□□□□□ -2.51
SMN2-205ENST00000505346 GPX7Q96SL4 187 aaPredicted RBP-0.64□□□□□ -2.51
SMN2-205ENST00000505346 C9orf16Q9BUW7 83 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms