RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 PROK2Q9HC23 129 aa-0.32□□□□□ -2.46
SMAD1-203ENST00000502342 ANK2Q01484 3957 aa-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 A0A0J9YY99 117 aa-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 IDO1P14902 403 aa-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 RPS3P23396 243 aaKnown RBP eCLIP-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 DIAPH2-AS1Q14236 149 aa-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 ASB16-AS1Q495Z4 193 aa-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 GLYATL3Q5SZD4 288 aa-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 XAF1Q6GPH4 301 aa-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 OR8J2Q8NGG1 315 aa-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 PLEKHB2Q96CS7 222 aa-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 CST11Q9H112 138 aa-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 NAT8BQ9UHF3 227 aa-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 N4BP2Q86UW6 1770 aaPredicted RBP-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 UBR2Q8IWV8 1755 aa-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 ZFYVE9O95405 1425 aa-0.33□□□□□ -2.46
SMAD1-203ENST00000502342 F8P00451 2351 aa-0.34□□□□□ -2.46
SMAD1-203ENST00000502342 JMJD1CQ15652 2540 aa-0.34□□□□□ -2.46
SMAD1-203ENST00000502342 TMEM114B3SHH9 223 aa-0.34□□□□□ -2.46
SMAD1-203ENST00000502342 NEDD8Q15843 81 aa-0.34□□□□□ -2.46
SMAD1-203ENST00000502342 ZCCHC23Q6ZST2 131 aa-0.34□□□□□ -2.46
SMAD1-203ENST00000502342 AP1S3Q96PC3 154 aa-0.34□□□□□ -2.46
SMAD1-203ENST00000502342 OR2J1Q9GZK6 312 aa-0.34□□□□□ -2.46
SMAD1-203ENST00000502342 TRPM1Q7Z4N2 1603 aa-0.35□□□□□ -2.46
SMAD1-203ENST00000502342 ABCA2Q9BZC7 2435 aa-0.35□□□□□ -2.46
SMAD1-203ENST00000502342 FRMPD1Q5SYB0 1578 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 HIST1H2BKO60814 126 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 NIPSNAP2O75323 286 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 NDUFC2O95298 119 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 SERPINA1P01009 418 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 IFNA14P01570 189 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 HIST1H2BJP06899 126 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 EVI2AP22794 236 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 INSL3P51460 131 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 NCALDP61601 193 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 ZNF56Q15929 161 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 GRPEL2Q8TAA5 225 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 SLC22A13Q9Y226 551 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 NISCHQ9Y2I1 1504 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 PLB1Q6P1J6 1458 aa-0.35□□□□□ -2.47
SMAD1-203ENST00000502342 ADGRL3Q9HAR2 1447 aa-0.36□□□□□ -2.47
SMAD1-203ENST00000502342 WNK2Q9Y3S1 2297 aa-0.36□□□□□ -2.47
SMAD1-203ENST00000502342 LOC107984156A0A0G2JMH3 177 aa-0.36□□□□□ -2.47
SMAD1-203ENST00000502342 TRGC2P03986 189 aa-0.36□□□□□ -2.47
SMAD1-203ENST00000502342 CDKN2CP42773 168 aa-0.36□□□□□ -2.47
SMAD1-203ENST00000502342 ARL17AQ8IVW1 177 aa-0.36□□□□□ -2.47
SMAD1-203ENST00000502342 FAM216BQ8N7L0 139 aa-0.36□□□□□ -2.47
SMAD1-203ENST00000502342 C9orf16Q9BUW7 83 aa-0.36□□□□□ -2.47
SMAD1-203ENST00000502342 UHRF1BP1Q6BDS2 1440 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 TRAV5A0A0B4J249 113 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 A0A1W2PRS3 328 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 A6NN06 94 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 G3V2T6 193 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 FXYD1O00168 92 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 ATP5HO75947 161 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 IGHV3-30P01768 117 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 IGHV3-30-5P0DP03 117 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 HSPE1P61604 102 aaKnown RBP-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 SNRPD3P62318 126 aaKnown RBP-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 CCL7P80098 99 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 MSMO1Q15800 293 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 VMO1Q7Z5L0 202 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 LINC00208Q96KT6 92 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 EFCAB11Q9BUY7 163 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 ARL2BPQ9Y2Y0 163 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 TPRKBQ9Y3C4 175 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 U3KQA8 63 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 CAMSAP2Q08AD1 1489 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 PIK3C2AO00443 1686 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 CTTNBP2Q8WZ74 1663 aa-0.37□□□□□ -2.47
SMAD1-203ENST00000502342 DSPPQ9NZW4 1301 aa-0.38□□□□□ -2.47
SMAD1-203ENST00000502342 AIPO00170 330 aa-0.38□□□□□ -2.47
SMAD1-203ENST00000502342 CYBAP13498 195 aa-0.38□□□□□ -2.47
SMAD1-203ENST00000502342 SCGB2B2Q4G0G5 96 aa-0.38□□□□□ -2.47
SMAD1-203ENST00000502342 HACD4Q5VWC8 232 aa-0.38□□□□□ -2.47
SMAD1-203ENST00000502342 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.38□□□□□ -2.47
SMAD1-203ENST00000502342 FAM213BQ8TBF2 198 aa-0.38□□□□□ -2.47
SMAD1-203ENST00000502342 PHB2Q99623 299 aa-0.38□□□□□ -2.47
SMAD1-203ENST00000502342 PCF11O94913 1555 aaKnown RBP-0.38□□□□□ -2.47
SMAD1-203ENST00000502342 CACNA1AO00555 2505 aa-0.38□□□□□ -2.47
SMAD1-203ENST00000502342 HMCN2Q8NDA2 5059 aa-0.38□□□□□ -2.47
SMAD1-203ENST00000502342 AHCTF1Q8WYP5 2266 aa-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 APOA2P02652 100 aa-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 MT-ND6P03923 174 aa-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 OGNP20774 298 aaKnown RBP-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 FXYD3Q14802 87 aa-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 RGS21Q2M5E4 152 aa-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 LINC00269Q8N2A0 174 aa-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 OR5AK2Q8NH90 309 aa-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 NEK7Q8TDX7 302 aa-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 PRAP1Q96NZ9 151 aa-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 OR4C12Q96R67 309 aa-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 GPX7Q96SL4 187 aaPredicted RBP-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 ASB4Q9Y574 426 aa-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 ABCA4P78363 2273 aa-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 CD109Q6YHK3 1445 aa-0.39□□□□□ -2.47
SMAD1-203ENST00000502342 C3orf85A0A1B0GTC6 90 aa-0.4□□□□□ -2.47
SMAD1-203ENST00000502342 RIIAD1A6NNX1 92 aa-0.4□□□□□ -2.47
SMAD1-203ENST00000502342 PIAS1O75925 651 aa-0.4□□□□□ -2.47
SMAD1-203ENST00000502342 C1QBP02746 253 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms