RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 KCNS1Q96KK3 526 aa3.45□□□□□ -1.86
SSR3-209ENST00000498205 DERL1Q9BUN8 251 aa3.45□□□□□ -1.86
SSR3-209ENST00000498205 ZNF430Q9H8G1 570 aaPredicted RBP3.45□□□□□ -1.86
SSR3-209ENST00000498205 TMEM14CQ9P0S9 112 aa3.45□□□□□ -1.86
SSR3-209ENST00000498205 NAT8BQ9UHF3 227 aa3.45□□□□□ -1.86
SSR3-209ENST00000498205 MRPS16Q9Y3D3 137 aaKnown RBP3.45□□□□□ -1.86
SSR3-209ENST00000498205 FAM215AQ9Y5M1 114 aa3.45□□□□□ -1.86
SSR3-209ENST00000498205 ABCA1O95477 2261 aa3.45□□□□□ -1.86
SSR3-209ENST00000498205 PTPRZ1P23471 2315 aaPredicted RBP3.44□□□□□ -1.86
SSR3-209ENST00000498205 IGHV3-43A0A0B4J1X8 118 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 TRAV3A0A0B4J244 114 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 SERTM2A0A1B0GWG4 89 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 A0A1B0GXF2 115 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 ZNF705GA8MUZ8 300 aaPredicted RBP3.44□□□□□ -1.86
SSR3-209ENST00000498205 SERF1AO75920 110 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 IGHV1-46P01743 117 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 SAA1P0DJI8 122 aaPredicted RBP3.44□□□□□ -1.86
SSR3-209ENST00000498205 IGHV3-43DP0DP04 118 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 TDGF1P3P51864 188 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 DLX6P56179 175 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 RPS20P60866 119 aaKnown RBP3.44□□□□□ -1.86
SSR3-209ENST00000498205 PDE6HQ13956 83 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 EDDM3AQ14507 147 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 PSG5Q15238 335 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 VMA21Q3ZAQ7 101 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 TMEM155Q4W5P6 130 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 PDZD11Q5EBL8 140 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 IBA57Q5T440 356 aaKnown RBP3.44□□□□□ -1.86
SSR3-209ENST00000498205 TMEM256Q8N2U0 113 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 C5orf17Q8NAS9 161 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 NECAP1Q8NC96 275 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 ST6GALNAC3Q8NDV1 305 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 OR9G1Q8NH87 305 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 UBALD1Q8TB05 177 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 FAM57AQ8TBR7 257 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 GTSF1Q8WW33 167 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 CHCHD1Q96BP2 118 aaKnown RBP3.44□□□□□ -1.86
SSR3-209ENST00000498205 FLYWCH2Q96CP2 140 aaKnown RBP3.44□□□□□ -1.86
SSR3-209ENST00000498205 FMC1Q96HJ9 113 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 C9orf85Q96MD7 179 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 GPR82Q96P67 336 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 VAMP8Q9BV40 100 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 SNHG12Q9BXW3 62 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 NGBQ9NPG2 151 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 ZNF331Q9NQX6 463 aaPredicted RBP3.44□□□□□ -1.86
SSR3-209ENST00000498205 UQCR10Q9UDW1 63 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 WASHC3Q9Y3C0 194 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 APC2O95996 2303 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 WDFY3Q8IZQ1 3526 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 PKDREJQ9NTG1 2253 aa3.44□□□□□ -1.86
SSR3-209ENST00000498205 VPS13AQ96RL7 3174 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 RAI1Q7Z5J4 1906 aaPredicted RBP3.43□□□□□ -1.86
SSR3-209ENST00000498205 A8MWL6 223 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 DEFB108AA8MXU0 73 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 PEX7O00628 323 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 TCAPO15273 167 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 OR7C2O60412 319 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 LTAP01374 205 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 IGLV2-23P01705 113 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 HLA-DRB1P01911 266 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 IGKV1-16P04430 117 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 CRYGBP07316 175 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 CBLN1P23435 193 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 CRYBB3P26998 211 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 S100A7P31151 101 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 CCL11P51671 97 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 UBE2G2P60604 165 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 UBE2L3P68036 154 aaKnown RBP3.43□□□□□ -1.86
SSR3-209ENST00000498205 MMDQ15546 238 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 USF2Q15853 346 aaPredicted RBP3.43□□□□□ -1.86
SSR3-209ENST00000498205 KLK9Q2XQG4 91 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 FBXL19-AS1Q494R0 122 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 LRRC10Q5BKY1 277 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 SAPCD1Q5SSQ6 148 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 COL5A1-AS1Q5SY13 56 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 MIR17HGQ75NE6 70 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 SPATA12Q7Z6I5 190 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 LRP11Q86VZ4 500 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 BAGE3Q86Y29 109 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 BAGE2Q86Y30 109 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 C11orf42Q8N5U0 333 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 DEFB123Q8N688 67 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 TPRX1Q8N7U7 411 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 Q8N976 141 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 OR2D3Q8NGH3 330 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 FXYD5Q96DB9 178 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 TBX15Q96SF7 602 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 HSPB9Q9BQS6 159 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 NDFIP1Q9BT67 221 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 SLC25A2Q9BXI2 301 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 SAMD10Q9BYL1 202 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 ANAPC11Q9NYG5 84 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 KLK9Q9UKQ9 250 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 ZNF835Q9Y2P0 537 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 MALRD1Q5VYJ5 2156 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 YLPM1P49750 1951 aaKnown RBP3.43□□□□□ -1.86
SSR3-209ENST00000498205 EYSQ5T1H1 3165 aa3.43□□□□□ -1.86
SSR3-209ENST00000498205 CEP295Q9C0D2 2601 aa3.42□□□□□ -1.86
SSR3-209ENST00000498205 ARFGEF3Q5TH69 2177 aa3.42□□□□□ -1.86
SSR3-209ENST00000498205 MUC6Q6W4X9 2439 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms