RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CCL20P78556 96 aa10.07□□□□□ -0.8
CPNE1-227ENST00000498056 CST9LP1Q5W188 147 aa10.07□□□□□ -0.8
CPNE1-227ENST00000498056 EBLN2Q6P2I7 272 aa10.07□□□□□ -0.8
CPNE1-227ENST00000498056 ZNF767PQ75MW2 155 aa10.07□□□□□ -0.8
CPNE1-227ENST00000498056 LYPD1Q8N2G4 141 aa10.07□□□□□ -0.8
CPNE1-227ENST00000498056 CMTM2Q8TAZ6 248 aa10.07□□□□□ -0.8
CPNE1-227ENST00000498056 SUN5Q8TC36 379 aa10.07□□□□□ -0.8
CPNE1-227ENST00000498056 MRPL53Q96EL3 112 aaKnown RBP10.07□□□□□ -0.8
CPNE1-227ENST00000498056 FAM110AQ9BQ89 295 aa10.07□□□□□ -0.8
CPNE1-227ENST00000498056 MANBALQ9NQG1 85 aa10.07□□□□□ -0.8
CPNE1-227ENST00000498056 CLEC5AQ9NY25 188 aa10.07□□□□□ -0.8
CPNE1-227ENST00000498056 PRELID1Q9Y255 219 aa10.07□□□□□ -0.8
CPNE1-227ENST00000498056 A0A1W2PRE2 83 aa10.06□□□□□ -0.8
CPNE1-227ENST00000498056 PGPA6NDG6 321 aa10.06□□□□□ -0.8
CPNE1-227ENST00000498056 FAM74A7A6NL05 159 aa10.06□□□□□ -0.8
CPNE1-227ENST00000498056 PAGE4O60829 102 aa10.06□□□□□ -0.8
CPNE1-227ENST00000498056 ZNF705DP0CH99 300 aaPredicted RBP10.06□□□□□ -0.8
CPNE1-227ENST00000498056 ZNF705BP0CI00 300 aaPredicted RBP10.06□□□□□ -0.8
CPNE1-227ENST00000498056 IGHV4-30-4P0DP06 118 aa10.06□□□□□ -0.8
CPNE1-227ENST00000498056 CSN1S1P47710 185 aa10.06□□□□□ -0.8
CPNE1-227ENST00000498056 ATP5G3P48201 142 aa10.06□□□□□ -0.8
CPNE1-227ENST00000498056 GNG5P63218 68 aa10.06□□□□□ -0.8
CPNE1-227ENST00000498056 IFITM2Q01629 132 aa10.06□□□□□ -0.8
CPNE1-227ENST00000498056 HIST1H1AQ02539 215 aaPredicted RBP10.06□□□□□ -0.8
CPNE1-227ENST00000498056 GDF5OSQ5U4N7 250 aa10.06□□□□□ -0.8
CPNE1-227ENST00000498056 FOXI2Q6ZQN5 318 aa10.06□□□□□ -0.8
CPNE1-227ENST00000498056 STHQ8IWL8 128 aa10.06□□□□□ -0.8
CPNE1-227ENST00000498056 Q8N1Y9 231 aa10.06□□□□□ -0.8
CPNE1-227ENST00000498056 SAV1Q9H4B6 383 aaPredicted RBP10.06□□□□□ -0.8
CPNE1-227ENST00000498056 TUBA4BQ9H853 241 aa10.06□□□□□ -0.8
CPNE1-227ENST00000498056 IGKV2-40A0A087WW87 121 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-227ENST00000498056 PRAC2D3DTV9 90 aa10.05□□□□□ -0.8
CPNE1-227ENST00000498056 K7EIL1 84 aa10.05□□□□□ -0.8
CPNE1-227ENST00000498056 IGKV2D-40P01614 121 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-227ENST00000498056 IGKV3-20P01619 116 aa10.05□□□□□ -0.8
CPNE1-227ENST00000498056 RAB14P61106 215 aa10.05□□□□□ -0.8
CPNE1-227ENST00000498056 HAGHQ16775 308 aa10.05□□□□□ -0.8
CPNE1-227ENST00000498056 C5orf17Q8NAS9 161 aa10.05□□□□□ -0.8
CPNE1-227ENST00000498056 OR10J6PQ8NGY7 276 aa10.05□□□□□ -0.8
CPNE1-227ENST00000498056 CITED4Q96RK1 184 aa10.05□□□□□ -0.8
CPNE1-227ENST00000498056 ARL2-SNX15V9GYD0 113 aa10.05□□□□□ -0.8
CPNE1-227ENST00000498056 A0A0J9YX75 114 aa10.04□□□□□ -0.8
CPNE1-227ENST00000498056 NMBP08949 121 aa10.04□□□□□ -0.8
CPNE1-227ENST00000498056 HLA-DRB4P13762 266 aa10.04□□□□□ -0.8
CPNE1-227ENST00000498056 RPL35AP18077 110 aaKnown RBP10.04□□□□□ -0.8
CPNE1-227ENST00000498056 SUMO1P63165 101 aaKnown RBP10.04□□□□□ -0.8
CPNE1-227ENST00000498056 OR4B1Q8NGF8 309 aa10.04□□□□□ -0.8
CPNE1-227ENST00000498056 OR8A1Q8NGG7 326 aa10.04□□□□□ -0.8
CPNE1-227ENST00000498056 MRAPQ8TCY5 172 aa10.04□□□□□ -0.8
CPNE1-227ENST00000498056 HLA-DRB4X5D2U9 266 aa10.04□□□□□ -0.8
CPNE1-227ENST00000498056 C11orf94C9JXX5 98 aa10.03□□□□□ -0.8
CPNE1-227ENST00000498056 BCL2P10415 239 aa10.03□□□□□ -0.8
CPNE1-227ENST00000498056 CNN1P51911 297 aaKnown RBP10.03□□□□□ -0.8
CPNE1-227ENST00000498056 DEFA6Q01524 100 aa10.03□□□□□ -0.8
CPNE1-227ENST00000498056 TOR2AQ5JU69 321 aa10.03□□□□□ -0.8
CPNE1-227ENST00000498056 GOLT1AQ6ZVE7 132 aa10.03□□□□□ -0.8
CPNE1-227ENST00000498056 RXFP4Q8TDU9 374 aa10.03□□□□□ -0.8
CPNE1-227ENST00000498056 DIRC3C9JPN6 131 aa10.02□□□□□ -0.81
CPNE1-227ENST00000498056 PEX7O00628 323 aa10.02□□□□□ -0.81
CPNE1-227ENST00000498056 DUSP14O95147 198 aaKnown RBP10.02□□□□□ -0.81
CPNE1-227ENST00000498056 TRPT1Q86TN4 253 aaKnown RBP10.02□□□□□ -0.81
CPNE1-227ENST00000498056 LYPD6BQ8NI32 183 aa10.02□□□□□ -0.81
CPNE1-227ENST00000498056 ATG101Q9BSB4 218 aa10.02□□□□□ -0.81
CPNE1-227ENST00000498056 NKX6-2Q9C056 277 aaPredicted RBP10.02□□□□□ -0.81
CPNE1-227ENST00000498056 PPP1R14DQ9NXH3 145 aa10.02□□□□□ -0.81
CPNE1-227ENST00000498056 LOC102724200A0A096LPH7 203 aaPredicted RBP10.01□□□□□ -0.81
CPNE1-227ENST00000498056 LOC102723971A0A1B0GUV8 181 aa10.01□□□□□ -0.81
CPNE1-227ENST00000498056 SCO2A0A1W2PP80 73 aa10.01□□□□□ -0.81
CPNE1-227ENST00000498056 RBMY1BA6NDE4 496 aaKnown RBP10.01□□□□□ -0.81
CPNE1-227ENST00000498056 RBMY1EA6NEQ0 496 aaKnown RBP10.01□□□□□ -0.81
CPNE1-227ENST00000498056 H3BMM0 161 aa10.01□□□□□ -0.81
CPNE1-227ENST00000498056 K7EQM0 130 aa10.01□□□□□ -0.81
CPNE1-227ENST00000498056 TCRAP04437 139 aa10.01□□□□□ -0.81
CPNE1-227ENST00000498056 RBMY1DP0C7P1 496 aaKnown RBP10.01□□□□□ -0.81
CPNE1-227ENST00000498056 FRMD6-AS1P0C7T7 363 aa10.01□□□□□ -0.81
CPNE1-227ENST00000498056 MEF2BQ02080 365 aaPredicted RBP10.01□□□□□ -0.81
CPNE1-227ENST00000498056 ERCC8Q13216 396 aa10.01□□□□□ -0.81
CPNE1-227ENST00000498056 DEFB121Q5J5C9 76 aa10.01□□□□□ -0.81
CPNE1-227ENST00000498056 TMEM78Q5T7P6 136 aa10.01□□□□□ -0.81
CPNE1-227ENST00000498056 CYB561D1Q8N8Q1 229 aa10.01□□□□□ -0.81
CPNE1-227ENST00000498056 Q8TAT8 98 aa10.01□□□□□ -0.81
CPNE1-227ENST00000498056 VAX2Q9UIW0 290 aa10.01□□□□□ -0.81
CPNE1-227ENST00000498056 NPIPB6E9PJ23 425 aa10□□□□□ -0.81
CPNE1-227ENST00000498056 AKR1C3P42330 323 aa10□□□□□ -0.81
CPNE1-227ENST00000498056 FXYD7P58549 80 aa10□□□□□ -0.81
CPNE1-227ENST00000498056 VGLL1Q99990 258 aa10□□□□□ -0.81
CPNE1-227ENST00000498056 TCEAL7Q9BRU2 100 aa10□□□□□ -0.81
CPNE1-227ENST00000498056 EIF5A2Q9GZV4 153 aaKnown RBP10□□□□□ -0.81
CPNE1-227ENST00000498056 EPDR1Q9UM22 224 aa10□□□□□ -0.81
CPNE1-227ENST00000498056 TRAV8-1A0A0A6YYK1 113 aa9.99□□□□□ -0.81
CPNE1-227ENST00000498056 SERTM2A0A1B0GWG4 89 aa9.99□□□□□ -0.81
CPNE1-227ENST00000498056 RBFOX3A6NFN3 312 aa9.99□□□□□ -0.81
CPNE1-227ENST00000498056 F6UZH7 168 aa9.99□□□□□ -0.81
CPNE1-227ENST00000498056 J3KRW8 73 aa9.99□□□□□ -0.81
CPNE1-227ENST00000498056 CA1P00915 261 aaPredicted RBP9.99□□□□□ -0.81
CPNE1-227ENST00000498056 TAGLN2P37802 199 aaKnown RBP9.99□□□□□ -0.81
CPNE1-227ENST00000498056 APOC4P55056 127 aa9.99□□□□□ -0.81
CPNE1-227ENST00000498056 CLLU1Q5K131 121 aa9.99□□□□□ -0.81
CPNE1-227ENST00000498056 HIST1H2BAQ96A08 127 aa9.99□□□□□ -0.81
CPNE1-227ENST00000498056 SGK494Q96LW2 274 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms