RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 FAM236BA0A1B0GV22 79 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 C17orf98A8MV24 154 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 BUB1B-PAK6H3BSN5 160 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 TMEM256-PLSCR3K7ERE1 68 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 LEPROTO15243 131 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 MPC2O95563 127 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 IGKV1-5P01602 117 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 RBP4P02753 201 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 SLC25A5P05141 298 aaKnown RBP1.92□□□□□ -2.1
VPS36-206ENST00000497149 CXCL1P09341 107 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 IGHV3-30-3P0DP02 117 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 ARPP19P56211 112 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 LGALS9BQ3B8N2 356 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 OR2T2Q6IF00 324 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 DPPA3Q6W0C5 159 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 FOXI2Q6ZQN5 318 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 MIR17HGQ75NE6 70 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 AAED1Q7RTV5 226 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 HIST3H2BBQ8N257 126 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 PSMF1Q92530 271 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 SCGB3A1Q96QR1 104 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 HIST1H2BLQ99880 126 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 NAA38Q9BRA0 125 aaKnown RBP1.92□□□□□ -2.1
VPS36-206ENST00000497149 AGPAT4-IT1Q9H0P7 198 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 BET1LQ9NYM9 111 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 COMMD3Q9UBI1 195 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 EPDR1Q9UM22 224 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 CHCHD2Q9Y6H1 151 aaPredicted RBP1.92□□□□□ -2.1
VPS36-206ENST00000497149 ADGBQ8N7X0 1667 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 SBF1O95248 1867 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 SCN8AQ9UQD0 1980 aa1.92□□□□□ -2.1
VPS36-206ENST00000497149 ATG2AQ2TAZ0 1938 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 CHD3Q12873 2000 aaKnown RBP1.91□□□□□ -2.1
VPS36-206ENST00000497149 OBSL1O75147 1896 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 TRBV20-1A0A075B6N2 111 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 SPAARA0A1B0GVQ0 90 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 H3BT86 120 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 CCDC179H3BU77 68 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 GEMIN2O14893 280 aaKnown RBP1.91□□□□□ -2.1
VPS36-206ENST00000497149 RER1O15258 196 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 CREBL2O60519 120 aaPredicted RBP1.91□□□□□ -2.1
VPS36-206ENST00000497149 TRACP01848 142 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 MT-ND6P03923 174 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 TRGC1P0CF51 173 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 TPT1P13693 172 aaKnown RBP1.91□□□□□ -2.1
VPS36-206ENST00000497149 SLC25A16P16260 332 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 ETV6P41212 452 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 FOXF1Q12946 379 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 MRPL51Q4U2R6 128 aaKnown RBP1.91□□□□□ -2.1
VPS36-206ENST00000497149 PYY3Q5JQD4 70 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 LGALS9CQ6DKI2 356 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 LINC00311Q8N616 119 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 ZFAND2AQ8N6M9 145 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 PACRGLQ8N7B6 248 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 MORN4Q8NDC4 146 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 WFDC5Q8TCV5 224 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 LINC00526Q96FQ7 95 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 ZC2HC1AQ96GY0 325 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 SLC35B3Q9H1N7 401 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 TP73-AS1Q9UF72 201 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 ATAD5Q96QE3 1844 aa1.91□□□□□ -2.1
VPS36-206ENST00000497149 MED14O60244 1454 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 MYOM2P54296 1465 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 ARHGAP35Q9NRY4 1499 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 DENND4CQ5VZ89 1909 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 PIGBOS1A0A0B4J2F0 54 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 C3orf85A0A1B0GTC6 90 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 FAM24AA6NFZ4 105 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 IGHV1-69P01742 117 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 HBDP02042 147 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 ZNF705BP0CI00 300 aaPredicted RBP1.9□□□□□ -2.11
VPS36-206ENST00000497149 SLC25A4P12235 298 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 FABP4P15090 132 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 NFYAP23511 347 aaPredicted RBP1.9□□□□□ -2.11
VPS36-206ENST00000497149 DIAPH2-AS1Q14236 149 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 MIAQ16674 131 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 CLLU1Q5K131 121 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 LINC00299Q6ZSB3 139 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 SPATA12Q7Z6I5 190 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 Q8NDZ9 215 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 S100A13Q99584 98 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 VAMP8Q9BV40 100 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 ATG5Q9H1Y0 275 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 PRO1933Q9H354 126 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 NHP2Q9NX24 153 aaKnown RBP1.9□□□□□ -2.11
VPS36-206ENST00000497149 TPRKBQ9Y3C4 175 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 DNAJC15Q9Y5T4 150 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 NINQ8N4C6 2090 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 SCN9AQ15858 1988 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 CCDC88AQ3V6T2 1871 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 CRB1P82279 1406 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 DIDO1Q9BTC0 2240 aaKnown RBP1.9□□□□□ -2.11
VPS36-206ENST00000497149 AKAP12Q02952 1782 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 HEATR5AQ86XA9 2040 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 SCN3AQ9NY46 2000 aa1.9□□□□□ -2.11
VPS36-206ENST00000497149 BAHCC1Q9P281 2608 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 PHIPQ8WWQ0 1821 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 PZPP20742 1482 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 A0A0J9YW62 118 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 A0A1W2PRS3 328 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms