RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 OR5A1Q8NGJ0 315 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 OR5C1Q8NGR4 320 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 DCANP1Q8TF63 244 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 ACOT12Q8WYK0 555 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 H1FXQ92522 213 aaKnown RBP2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 GPX7Q96SL4 187 aaPredicted RBP2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 GGACTQ9BVM4 153 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 C1QTNF6Q9BXI9 259 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 OR2H1Q9GZK4 316 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 IFI27L2Q9H2X8 130 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 ZNRD1Q9P1U0 126 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 HIGD1AQ9Y241 93 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 RBM7Q9Y580 266 aaKnown RBP2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 PHLDA3Q9Y5J5 127 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 DOCK4Q8N1I0 1966 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 DENND4CQ5VZ89 1909 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 TRDV1A0A1B0GX56 115 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 A8MWP4 228 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 OVOL1O14753 267 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 RBFOX2O43251 390 aaKnown RBP eCLIP2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 CDS2O95674 445 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 FAM107AO95990 144 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 TRGV3P03979 118 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 LINC00869P0C866 280 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 BCL2P10415 239 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 IL1RNP18510 177 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 ELK1P19419 428 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 KDELR1P24390 212 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 CMPK1P30085 196 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 CCR2P41597 374 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 RAB13P51153 203 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 TAS2R45P59539 299 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 RPL30P62888 115 aaKnown RBP2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 WHAMMP3Q1A5X7 153 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 Q5XG85 94 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 SLC25A34Q6PIV7 304 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 SSX8Q7RTT4 187 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 SPATA12Q7Z6I5 190 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 ZFAND2AQ8N6M9 145 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 OR52R1Q8NGF1 315 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 OR51T1Q8NGJ9 327 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 OR4C16Q8NGL9 310 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 OR13C4Q8NGS5 318 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 OR4K15Q8NH41 348 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 LINC01560Q8TB33 94 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 FNDC9Q8TBE3 224 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 NUP210Q8TEM1 1887 aaPredicted RBP2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 C1orf54Q8WWF1 131 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 ZNF799Q96GE5 643 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 C2orf50Q96LR7 162 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 NKX6-2Q9C056 277 aaPredicted RBP2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 OR2J1Q9GZK6 312 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 IMUPQ9GZP8 106 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 AICDAQ9GZX7 198 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 LINC00574Q9H8X3 128 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 ZNF835Q9Y2P0 537 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 KLK5Q9Y337 293 aaPredicted RBP2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 LINC00588Q9Y4M8 146 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 DNAJC13O75165 2243 aa2.38□□□□□ -2.03
EXOSC3-208ENST00000496910 LRP2P98164 4655 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 DHRS12A0PJE2 317 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 BUB1B-PAK6H3BSN5 160 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 K7ERS5 55 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 IGKV1D-33P01593 117 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 IGKV1-33P01594 117 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 IGHV1-46P01743 117 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 NTF3P20783 257 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 KRTAP10-3P60369 221 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 CCL20P78556 96 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 RASL11AQ6T310 242 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 Q6ZR54 194 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 LINC00612Q8N6U2 182 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 ZNF709Q8N972 641 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 RPS4Y2Q8TD47 263 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 SLC25A46Q96AG3 418 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 SLAMF6Q96DU3 332 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 RMI2Q96E14 147 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 IMMP1LQ96LU5 166 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 TBL1YQ9BQ87 522 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 NDFIP1Q9BT67 221 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 SMIM3Q9BZL3 60 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 GABARAPL1Q9H0R8 117 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 OTORQ9NRC9 128 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 ZNF355PQ9NSJ1 428 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 CALML5Q9NZT1 146 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 LAMTOR2Q9Y2Q5 125 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 DNAH3Q8TD57 4116 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 NUP210LQ5VU65 1888 aa2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 NUP214P35658 2090 aaPredicted RBP2.37□□□□□ -2.03
EXOSC3-208ENST00000496910 MED12Q93074 2177 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 TRAV38-1A0A0B4J264 116 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 ZNF860A6NHJ4 632 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 GABARAPH6UMI1 98 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 J3QQQ9 107 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 M0R378 163 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 TAX1BP3O14907 124 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 OR2H2O95918 312 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 NRASP01111 189 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 HRASP01112 189 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 KRASP01116 189 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms