RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 HSBP1O75506 76 aa10.09□□□□□ -0.79
GARNL3-220ENST00000496711 PRR31Q5SQ13 230 aa10.09□□□□□ -0.79
GARNL3-220ENST00000496711 NIT1Q86X76 327 aa10.09□□□□□ -0.79
GARNL3-220ENST00000496711 NDUFAF3Q9BU61 184 aa10.09□□□□□ -0.79
GARNL3-220ENST00000496711 SPTAN1Q13813 2472 aaKnown RBP10.09□□□□□ -0.79
GARNL3-220ENST00000496711 LOC102724200A0A096LPH7 203 aaPredicted RBP10.08□□□□□ -0.8
GARNL3-220ENST00000496711 IGHG4P01861 327 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 NTF3P20783 257 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 RIGQ13278 110 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 FAM162BQ5T6X4 162 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 RNASEKQ6P5S7 137 aaKnown RBP10.08□□□□□ -0.8
GARNL3-220ENST00000496711 FAM19A2Q8N3H0 131 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 PRR25Q96S07 402 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 METTL26Q96S19 204 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 SLC50A1Q9BRV3 221 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 ACACBO00763 2458 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 A0A1B0GW15 77 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 H3BUX3 64 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 SH2D1AO60880 128 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 ARMS2P0C7Q2 107 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 HLA-DMBP28068 263 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 DSCR9P59020 149 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 IGFL4Q6B9Z1 124 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 GATD1Q8NB37 220 aa10.08□□□□□ -0.8
GARNL3-220ENST00000496711 USP9XQ93008 2570 aaPredicted RBP10.07□□□□□ -0.8
GARNL3-220ENST00000496711 CSMD1Q96PZ7 3565 aa10.07□□□□□ -0.8
GARNL3-220ENST00000496711 TMEM189A5PLL7 270 aa10.07□□□□□ -0.8
GARNL3-220ENST00000496711 A6NDX4 124 aa10.07□□□□□ -0.8
GARNL3-220ENST00000496711 TRGV3P03979 118 aa10.07□□□□□ -0.8
GARNL3-220ENST00000496711 IGF1P05019 195 aa10.07□□□□□ -0.8
GARNL3-220ENST00000496711 LY6EQ16553 131 aa10.07□□□□□ -0.8
GARNL3-220ENST00000496711 LCN12Q6JVE5 192 aa10.07□□□□□ -0.8
GARNL3-220ENST00000496711 Q8N976 141 aa10.07□□□□□ -0.8
GARNL3-220ENST00000496711 Q8TAT8 98 aa10.07□□□□□ -0.8
GARNL3-220ENST00000496711 BORCS7Q96B45 105 aa10.07□□□□□ -0.8
GARNL3-220ENST00000496711 LINC00527Q9UJ94 153 aa10.07□□□□□ -0.8
GARNL3-220ENST00000496711 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.06□□□□□ -0.8
GARNL3-220ENST00000496711 B4DSR2 109 aa10.06□□□□□ -0.8
GARNL3-220ENST00000496711 M0QZK8 103 aa10.06□□□□□ -0.8
GARNL3-220ENST00000496711 VGLL1Q99990 258 aa10.06□□□□□ -0.8
GARNL3-220ENST00000496711 NDFIP1Q9BT67 221 aa10.06□□□□□ -0.8
GARNL3-220ENST00000496711 VAMP8Q9BV40 100 aa10.06□□□□□ -0.8
GARNL3-220ENST00000496711 IGHV3-66A0A0C4DH42 116 aa10.06□□□□□ -0.8
GARNL3-220ENST00000496711 M0R2Z0 102 aa10.06□□□□□ -0.8
GARNL3-220ENST00000496711 IGHG2P01859 326 aa10.06□□□□□ -0.8
GARNL3-220ENST00000496711 C3orf79P0CE67 100 aa10.06□□□□□ -0.8
GARNL3-220ENST00000496711 FLNCQ14315 2725 aa10.06□□□□□ -0.8
GARNL3-220ENST00000496711 URB1-AS1Q96HZ7 61 aa10.06□□□□□ -0.8
GARNL3-220ENST00000496711 HIF1ANQ9NWT6 349 aa10.06□□□□□ -0.8
GARNL3-220ENST00000496711 RBAKDNA6NC62 111 aa10.05□□□□□ -0.8
GARNL3-220ENST00000496711 H3BUA1 57 aa10.05□□□□□ -0.8
GARNL3-220ENST00000496711 SLC25A16P16260 332 aa10.05□□□□□ -0.8
GARNL3-220ENST00000496711 ARL3P36405 182 aa10.05□□□□□ -0.8
GARNL3-220ENST00000496711 NRGNQ92686 78 aa10.05□□□□□ -0.8
GARNL3-220ENST00000496711 CHCHD1Q96BP2 118 aaKnown RBP10.05□□□□□ -0.8
GARNL3-220ENST00000496711 C20orf144Q9BQM9 153 aa10.05□□□□□ -0.8
GARNL3-220ENST00000496711 TPPP3Q9BW30 176 aa10.05□□□□□ -0.8
GARNL3-220ENST00000496711 U3KQE9 123 aa10.05□□□□□ -0.8
GARNL3-220ENST00000496711 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.05□□□□□ -0.8
GARNL3-220ENST00000496711 IGHV3OR16-13A0A075B7E8 117 aa10.04□□□□□ -0.8
GARNL3-220ENST00000496711 TMSB15BA0A087X1C1 80 aa10.04□□□□□ -0.8
GARNL3-220ENST00000496711 IGHV3-74A0A0B4J1X5 117 aa10.04□□□□□ -0.8
GARNL3-220ENST00000496711 FAM181BA6NEQ2 426 aa10.04□□□□□ -0.8
GARNL3-220ENST00000496711 ZNF207O43670 478 aaKnown RBP10.04□□□□□ -0.8
GARNL3-220ENST00000496711 BRI3O95415 125 aa10.04□□□□□ -0.8
GARNL3-220ENST00000496711 PRB1P04280 392 aa10.04□□□□□ -0.8
GARNL3-220ENST00000496711 GATA3P23771 443 aa10.04□□□□□ -0.8
GARNL3-220ENST00000496711 BMI1P35226 326 aa10.04□□□□□ -0.8
GARNL3-220ENST00000496711 RPS20P60866 119 aaKnown RBP10.04□□□□□ -0.8
GARNL3-220ENST00000496711 RNF182Q8N6D2 247 aa10.04□□□□□ -0.8
GARNL3-220ENST00000496711 USP24Q9UPU5 2620 aa10.04□□□□□ -0.8
GARNL3-220ENST00000496711 TDRG1Q3Y452 100 aa10.04□□□□□ -0.8
GARNL3-220ENST00000496711 PAM16Q9Y3D7 125 aa10.04□□□□□ -0.8
GARNL3-220ENST00000496711 IGHV3-49A0A0A0MS15 119 aa10.03□□□□□ -0.8
GARNL3-220ENST00000496711 PRAC2D3DTV9 90 aa10.03□□□□□ -0.8
GARNL3-220ENST00000496711 PPIFP30405 207 aaKnown RBP10.03□□□□□ -0.8
GARNL3-220ENST00000496711 ZNF80P51504 273 aaPredicted RBP10.03□□□□□ -0.8
GARNL3-220ENST00000496711 SRSF2Q01130 221 aaKnown RBP10.03□□□□□ -0.8
GARNL3-220ENST00000496711 LYZL1Q6UWQ5 148 aa10.03□□□□□ -0.8
GARNL3-220ENST00000496711 ZNF493Q6ZR52 646 aa10.03□□□□□ -0.8
GARNL3-220ENST00000496711 MRPL53Q96EL3 112 aaKnown RBP10.03□□□□□ -0.8
GARNL3-220ENST00000496711 COL12A1Q99715 3063 aa10.02□□□□□ -0.8
GARNL3-220ENST00000496711 M0QZ24 198 aa10.02□□□□□ -0.8
GARNL3-220ENST00000496711 AVPP01185 164 aa10.02□□□□□ -0.8
GARNL3-220ENST00000496711 ERCC8Q13216 396 aa10.02□□□□□ -0.8
GARNL3-220ENST00000496711 DMRTA1Q5VZB9 504 aa10.02□□□□□ -0.8
GARNL3-220ENST00000496711 C8orf86Q6ZUL3 223 aa10.02□□□□□ -0.8
GARNL3-220ENST00000496711 USMG5Q96IX5 58 aa10.02□□□□□ -0.8
GARNL3-220ENST00000496711 TRAV8-2A0A0B4J237 113 aa10.02□□□□□ -0.81
GARNL3-220ENST00000496711 NDUFA4O00483 81 aa10.02□□□□□ -0.81
GARNL3-220ENST00000496711 COX6B1P14854 86 aa10.02□□□□□ -0.81
GARNL3-220ENST00000496711 RAB4AP20338 218 aa10.02□□□□□ -0.81
GARNL3-220ENST00000496711 CTRLP40313 264 aa10.02□□□□□ -0.81
GARNL3-220ENST00000496711 LBHQ53QV2 105 aaPredicted RBP10.02□□□□□ -0.81
GARNL3-220ENST00000496711 LURAP1LQ8IV03 231 aa10.02□□□□□ -0.81
GARNL3-220ENST00000496711 SPG11Q96JI7 2443 aa10.01□□□□□ -0.81
GARNL3-220ENST00000496711 IGHV1-24A0A0C4DH33 117 aa10.01□□□□□ -0.81
GARNL3-220ENST00000496711 LINC00614P0C842 121 aa10.01□□□□□ -0.81
GARNL3-220ENST00000496711 BTF3P20290 206 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms