RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 FAM106CPP0CH98 169 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 HOXB4P17483 251 aaPredicted RBP7.22□□□□□ -1.25
HPS4-217ENST00000496385 SUB1P53999 127 aaKnown RBP eCLIP7.22□□□□□ -1.25
HPS4-217ENST00000496385 FAM106AQ4KMX7 169 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 SBSPONQ8IVN8 264 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 Q8NA96 180 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 MAP1LC3AQ9H492 121 aa7.22□□□□□ -1.25
HPS4-217ENST00000496385 C16orf97H3BN30 126 aa7.21□□□□□ -1.25
HPS4-217ENST00000496385 HOXA3O43365 443 aaPredicted RBP7.21□□□□□ -1.25
HPS4-217ENST00000496385 DPM2O94777 84 aa7.21□□□□□ -1.25
HPS4-217ENST00000496385 CNIH1O95406 144 aa7.21□□□□□ -1.25
HPS4-217ENST00000496385 SMCPP49901 116 aaPredicted RBP7.21□□□□□ -1.25
HPS4-217ENST00000496385 C3AR1Q16581 482 aa7.21□□□□□ -1.25
HPS4-217ENST00000496385 RPEQ96AT9 228 aa7.21□□□□□ -1.25
HPS4-217ENST00000496385 TRBV20-1A0A075B6N2 111 aa7.21□□□□□ -1.26
HPS4-217ENST00000496385 IQCF6A8MYZ5 107 aa7.21□□□□□ -1.26
HPS4-217ENST00000496385 D6R8Y8 96 aa7.21□□□□□ -1.26
HPS4-217ENST00000496385 PRRG2O14669 202 aa7.21□□□□□ -1.26
HPS4-217ENST00000496385 IL4P05112 153 aa7.21□□□□□ -1.26
HPS4-217ENST00000496385 NDUFV3P56181 108 aaKnown RBP7.21□□□□□ -1.26
HPS4-217ENST00000496385 ERHP84090 104 aaKnown RBP7.21□□□□□ -1.26
HPS4-217ENST00000496385 FHL3Q13643 280 aa7.21□□□□□ -1.26
HPS4-217ENST00000496385 PRR31Q5SQ13 230 aa7.21□□□□□ -1.26
HPS4-217ENST00000496385 IGFL2Q6UWQ7 119 aa7.21□□□□□ -1.26
HPS4-217ENST00000496385 LINC00305Q7Z4B0 112 aa7.21□□□□□ -1.26
HPS4-217ENST00000496385 MDS2Q8NDY4 140 aa7.21□□□□□ -1.26
HPS4-217ENST00000496385 RFESDQ8TAC1 157 aa7.21□□□□□ -1.26
HPS4-217ENST00000496385 SPXQ9BT56 116 aa7.21□□□□□ -1.26
HPS4-217ENST00000496385 HINT2Q9BX68 163 aa7.21□□□□□ -1.26
HPS4-217ENST00000496385 OTORQ9NRC9 128 aa7.21□□□□□ -1.26
HPS4-217ENST00000496385 A0A087WX48 190 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 BRI3O95415 125 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 GAGE2BQ13066 116 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 GAGE2EQ4V326 116 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 RPL39P5Q59GN2 51 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 PPP1R35Q8TAP8 253 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 SRSF12Q8WXF0 261 aaKnown RBP7.2□□□□□ -1.26
HPS4-217ENST00000496385 TMEM126AQ9H061 195 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 GAGE2DQ9UEU5 116 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 TRBV7-3A0A075B6L6 115 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 ZNF503-AS2A6NEH8 195 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 ZNF785A8K8V0 405 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 FCER1GP30273 86 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 IGFL3Q6UXB1 125 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 YRDCQ86U90 279 aaKnown RBP7.2□□□□□ -1.26
HPS4-217ENST00000496385 HIST1H4GQ99525 98 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 YAE1D1Q9NRH1 226 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 TRAV17A0A0B4J275 112 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 LOC389332A0A1B0GUA5 103 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 IGHV3-9P01782 118 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 RFPL3SP0C7P2 107 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 IFITM1P13164 125 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 LOXL3P58215 753 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 KLRB1Q12918 225 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 TTC32Q5I0X7 151 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 ZCCHC24Q8N2G6 241 aaKnown RBP7.2□□□□□ -1.26
HPS4-217ENST00000496385 CARD19Q96LW7 228 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 Q9H3A6 140 aa7.2□□□□□ -1.26
HPS4-217ENST00000496385 RBP4P02753 201 aa7.19□□□□□ -1.26
HPS4-217ENST00000496385 CFHR2P36980 270 aa7.19□□□□□ -1.26
HPS4-217ENST00000496385 TBC1D28Q2M2D7 210 aa7.19□□□□□ -1.26
HPS4-217ENST00000496385 ZC2HC1BQ5TFG8 222 aa7.19□□□□□ -1.26
HPS4-217ENST00000496385 MORN3Q6PF18 240 aaPredicted RBP7.19□□□□□ -1.26
HPS4-217ENST00000496385 NXT2Q9NPJ8 142 aaKnown RBP7.19□□□□□ -1.26
HPS4-217ENST00000496385 DNAJC13O75165 2243 aa7.19□□□□□ -1.26
HPS4-217ENST00000496385 FCN3O75636 299 aa7.19□□□□□ -1.26
HPS4-217ENST00000496385 GRPP07492 148 aa7.19□□□□□ -1.26
HPS4-217ENST00000496385 ZNF843Q8N446 348 aa7.19□□□□□ -1.26
HPS4-217ENST00000496385 TMEM75Q8N9X5 138 aa7.19□□□□□ -1.26
HPS4-217ENST00000496385 SLC25A39Q9BZJ4 359 aaPredicted RBP7.19□□□□□ -1.26
HPS4-217ENST00000496385 DEFB127Q9H1M4 99 aa7.19□□□□□ -1.26
HPS4-217ENST00000496385 TANC2Q9HCD6 1990 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 FAM90A27PA6NNH2 459 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 A8MWV9 139 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 SNCGO76070 127 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 PRSS1P07477 247 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 MLANAQ16655 118 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 SGK494Q96LW2 274 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 RAB1BQ9H0U4 201 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 CXXC4Q9H2H0 198 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 FLNCQ14315 2725 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 ZGRF1Q86YA3 2104 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 MYO18BQ8IUG5 2567 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 IGKV1D-37A0A075B6S9 117 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 MYMXA0A1B0GTQ4 84 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 NCBP2LA6PVI3 153 aaKnown RBP7.18□□□□□ -1.26
HPS4-217ENST00000496385 IGLV2-11P01706 119 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 GP9P14770 177 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 MAGEA5P43359 124 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 ZNF134P52741 427 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 UBE2D3P61077 147 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 UBE2D2P62837 147 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 C11orf53Q8IXP5 236 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 CIARTQ8N365 385 aaPredicted RBP7.18□□□□□ -1.26
HPS4-217ENST00000496385 GLMPQ8WWB7 406 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 NDUFA4L2Q9NRX3 87 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 TMEM14CQ9P0S9 112 aa7.18□□□□□ -1.26
HPS4-217ENST00000496385 TNFRSF1AP19438 455 aa7.17□□□□□ -1.26
HPS4-217ENST00000496385 PPIFP30405 207 aaKnown RBP7.17□□□□□ -1.26
HPS4-217ENST00000496385 MRPL51Q4U2R6 128 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms