RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 HEATR5AQ86XA9 2040 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 CCDC88CQ9P219 2028 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 IGKV1D-42A0A075B6H8 117 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 A0A087WSZ3 146 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 TRAV27A0A087WT01 109 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 hDV103S1A0JD37 113 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 IBA57-AS1B1ANH7 110 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 NPFFO15130 113 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 TCRAP04437 139 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 MGST1P10620 155 aaKnown RBP1.74□□□□□ -2.13
CLK1-214ENST00000496205 CCL4P13236 92 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 DSCR4P56555 118 aaPredicted RBP1.74□□□□□ -2.13
CLK1-214ENST00000496205 RPL26P61254 145 aaKnown RBP1.74□□□□□ -2.13
CLK1-214ENST00000496205 HES1Q14469 280 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 TAF9Q16594 264 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 TEN1Q86WV5 123 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 ATOH7Q8N100 152 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 OR2T35Q8NGX2 323 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 TMEM254Q8TBM7 123 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 POP5Q969H6 163 aaKnown RBP1.74□□□□□ -2.13
CLK1-214ENST00000496205 MUCL1Q96DR8 90 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 ZC2HC1AQ96GY0 325 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 SLC50A1Q9BRV3 221 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 CCDC167Q9P0B6 97 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 RPL26L1Q9UNX3 145 aaKnown RBP1.74□□□□□ -2.13
CLK1-214ENST00000496205 GRIN2AQ12879 1464 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 BCL9LQ86UU0 1499 aa1.74□□□□□ -2.13
CLK1-214ENST00000496205 ZNF705FA8MVS1 300 aaPredicted RBP1.73□□□□□ -2.13
CLK1-214ENST00000496205 E7EUB6 86 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 M0R233 179 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 TRACP01848 142 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 SLC25A5P05141 298 aaKnown RBP1.73□□□□□ -2.13
CLK1-214ENST00000496205 LINC00694P0DN24 101 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 CSRP1P21291 193 aaKnown RBP1.73□□□□□ -2.13
CLK1-214ENST00000496205 ETV6P41212 452 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 GUCA1AP43080 201 aaPredicted RBP1.73□□□□□ -2.13
CLK1-214ENST00000496205 MRPS10P82664 201 aaKnown RBP1.73□□□□□ -2.13
CLK1-214ENST00000496205 CDK6Q00534 326 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 ELOBQ15370 118 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 SS18Q15532 418 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 KRTAP6-3Q3LI67 103 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 GLIPR1L1Q6UWM5 242 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 Q8IYB0 196 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 C4orf3Q8WVX3 66 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 OR4C12Q96R67 309 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 TCEAL7Q9BRU2 100 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 GGACTQ9BVM4 153 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 CST9LQ9H4G1 147 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 TAF9BQ9HBM6 251 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 SAR1AQ9NR31 198 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 METTL1Q9UBP6 276 aaKnown RBP1.73□□□□□ -2.13
CLK1-214ENST00000496205 TNFSF18Q9UNG2 199 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 NALCNQ8IZF0 1738 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 ANAPC1Q9H1A4 1944 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 PTPRGP23470 1445 aa1.73□□□□□ -2.13
CLK1-214ENST00000496205 ROCK2O75116 1388 aaKnown RBP1.72□□□□□ -2.13
CLK1-214ENST00000496205 SDK2Q58EX2 2172 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 ARHGAP32A7KAX9 2087 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 CDK5RAP2Q96SN8 1893 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 COL1A1P02452 1464 aaPredicted RBP1.72□□□□□ -2.13
CLK1-214ENST00000496205 CDC42EP2O14613 210 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 RBP4P02753 201 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 APODP05090 189 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 ASAH2BP0C7U1 165 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 PLGLB1Q02325 96 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 CIRBPQ14011 172 aaKnown RBP1.72□□□□□ -2.13
CLK1-214ENST00000496205 DIAPH2-AS1Q14236 149 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 SCIMPQ6UWF3 145 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 C2orf82Q6UX34 121 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 Q8N814 137 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 OR5AK2Q8NH90 309 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 ZNF431Q8TF32 576 aaPredicted RBP1.72□□□□□ -2.13
CLK1-214ENST00000496205 ZSWIM8A7E2V4 1837 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 SPEF2Q9C093 1822 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 RTEL1-TNFRSF6BF6WH68 1400 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 MYOM3Q5VTT5 1437 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 SCN8AQ9UQD0 1980 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 STRCQ7RTU9 1775 aa1.72□□□□□ -2.13
CLK1-214ENST00000496205 UHRF1BP1LA0JNW5 1464 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 TRAV3A0A0B4J244 114 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 TRAV12-1A0A0B4J245 112 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 TRAV1-1A0A0B4J248 108 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 ZNF670-ZNF695F2Z2N8 137 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 IGLV1-51P01701 117 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 CRPP02741 224 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 IGKV4-1P06312 121 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 ZNF846Q147U1 533 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 NEDD8Q15843 81 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 CCSMST1Q4G0I0 132 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 ARPINQ7Z6K5 226 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 RPS19BP1Q86WX3 136 aaKnown RBP1.71□□□□□ -2.14
CLK1-214ENST00000496205 C9orf163Q8N9P6 203 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 SFT2D1Q8WV19 159 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 Q96M85 177 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 TIMM21Q9BVV7 248 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 SLC35B3Q9H1N7 401 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 COMMD3Q9UBI1 195 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 SOX21Q9Y651 276 aaPredicted RBP1.71□□□□□ -2.14
CLK1-214ENST00000496205 MYLKQ15746 1914 aa1.71□□□□□ -2.14
CLK1-214ENST00000496205 DISP1Q96F81 1524 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms