RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	SIGLEC8	Q9NYZ4	499 aa		10.56	□□□□□ -0.72
SUPT20H-222	ENST00000495071	CACNG7	P62955	275 aa		10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	C16orf54	Q6UWD8	224 aa		10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	NPIPB5	A8MRT5	1133 aa		10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	SMKR1	H3BMG3	65 aa		10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	ORM1	P02763	201 aa		10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	COX8A	P10176	69 aa		10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	RPL7	P18124	248 aa	Known RBP	10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	PSG9	Q00887	426 aa		10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	WFDC3	Q8IUB2	231 aa		10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	THYN1	Q9P016	225 aa		10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	SCGB2A1	O75556	95 aa		10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	C5orf64	Q2M2E5	130 aa		10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	FAM104B	Q5XKR9	115 aa		10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	ARPC1A	Q92747	370 aa		10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	ATM	Q13315	3056 aa		10.55	□□□□□ -0.72
SUPT20H-222	ENST00000495071	KALRN	O60229	2985 aa		10.54	□□□□□ -0.72
SUPT20H-222	ENST00000495071	SAPCD1	Q5SSQ6	148 aa		10.54	□□□□□ -0.72
SUPT20H-222	ENST00000495071	TACC2	O95359	2948 aa		10.54	□□□□□ -0.72
SUPT20H-222	ENST00000495071	PDE6H	Q13956	83 aa		10.54	□□□□□ -0.72
SUPT20H-222	ENST00000495071	VPS25	Q9BRG1	176 aa		10.54	□□□□□ -0.72
SUPT20H-222	ENST00000495071	LY6L	H3BQJ8	138 aa		10.54	□□□□□ -0.72
SUPT20H-222	ENST00000495071	CD5L	O43866	347 aa		10.54	□□□□□ -0.72
SUPT20H-222	ENST00000495071	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	C7orf71	A4D174	169 aa		10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	GRN	P28799	593 aa	Known RBP	10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	FER1L6-AS1	Q8NA97	138 aa		10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	SPTBN1	Q01082	2364 aa	Known RBP	10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	CEP295	Q9C0D2	2601 aa		10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	NMU	P48645	174 aa		10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	RBX1	P62877	108 aa		10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	MRPL51	Q4U2R6	128 aa	Known RBP	10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	TMEM97	Q5BJF2	176 aa		10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	TMEM190	Q8WZ59	177 aa		10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	PEF1	Q9UBV8	284 aa	Known RBP	10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071		K7EP13	123 aa		10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	HBD	P02042	147 aa		10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	RHOG	P84095	191 aa		10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	C18orf15	Q96N68	181 aa		10.53	□□□□□ -0.72
SUPT20H-222	ENST00000495071	BMI1	P35226	326 aa		10.52	□□□□□ -0.72
SUPT20H-222	ENST00000495071	ANKRD39	Q53RE8	183 aa		10.52	□□□□□ -0.72
SUPT20H-222	ENST00000495071	RABAC1	Q9UI14	185 aa		10.52	□□□□□ -0.72
SUPT20H-222	ENST00000495071	MRPS12	O15235	138 aa	Known RBP	10.52	□□□□□ -0.73
SUPT20H-222	ENST00000495071	FANCD2OS	Q96PS1	177 aa		10.52	□□□□□ -0.73
SUPT20H-222	ENST00000495071	PRR25	Q96S07	402 aa		10.52	□□□□□ -0.73
SUPT20H-222	ENST00000495071	VKORC1	Q9BQB6	163 aa		10.52	□□□□□ -0.73
SUPT20H-222	ENST00000495071	ZNF292	O60281	2723 aa		10.52	□□□□□ -0.73
SUPT20H-222	ENST00000495071	EGR2	P11161	476 aa	Predicted RBP	10.52	□□□□□ -0.73
SUPT20H-222	ENST00000495071	SELENOK	Q9Y6D0	94 aa		10.52	□□□□□ -0.73
SUPT20H-222	ENST00000495071	HLA-DMB	P28068	263 aa		10.51	□□□□□ -0.73
SUPT20H-222	ENST00000495071	ZNF493	Q6ZR52	646 aa		10.51	□□□□□ -0.73
SUPT20H-222	ENST00000495071	IFI27L1	Q96BM0	104 aa		10.51	□□□□□ -0.73
SUPT20H-222	ENST00000495071	VGLL1	Q99990	258 aa		10.51	□□□□□ -0.73
SUPT20H-222	ENST00000495071	IGLV11-55	A0A075B6I3	123 aa		10.51	□□□□□ -0.73
SUPT20H-222	ENST00000495071	ZNF562	Q6V9R5	426 aa		10.51	□□□□□ -0.73
SUPT20H-222	ENST00000495071	ZZEF1	O43149	2961 aa		10.51	□□□□□ -0.73
SUPT20H-222	ENST00000495071	OVOL3	O00110	214 aa		10.51	□□□□□ -0.73
SUPT20H-222	ENST00000495071	NPY	P01303	97 aa		10.51	□□□□□ -0.73
SUPT20H-222	ENST00000495071	RPS20	P60866	119 aa	Known RBP	10.5	□□□□□ -0.73
SUPT20H-222	ENST00000495071	NDP	Q00604	133 aa		10.5	□□□□□ -0.73
SUPT20H-222	ENST00000495071	FOXC1	Q12948	553 aa		10.5	□□□□□ -0.73
SUPT20H-222	ENST00000495071	CFHR4	Q92496	578 aa		10.5	□□□□□ -0.73
SUPT20H-222	ENST00000495071	TRAV8-6	A0A0B4J262	113 aa		10.5	□□□□□ -0.73
SUPT20H-222	ENST00000495071	GAGE10	A6NGK3	116 aa		10.5	□□□□□ -0.73
SUPT20H-222	ENST00000495071	PPIF	P30405	207 aa	Known RBP	10.5	□□□□□ -0.73
SUPT20H-222	ENST00000495071	CCDC144NL	Q6NUI1	221 aa		10.5	□□□□□ -0.73
SUPT20H-222	ENST00000495071	C2orf91	Q6ZV80	131 aa		10.5	□□□□□ -0.73
SUPT20H-222	ENST00000495071	OR11H6	Q8NGC7	330 aa		10.5	□□□□□ -0.73
SUPT20H-222	ENST00000495071	CST9L	Q9H4G1	147 aa		10.5	□□□□□ -0.73
SUPT20H-222	ENST00000495071		A1L4Q6	167 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071		A6NDN8	102 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	TMEM11	P17152	192 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	FOXE3	Q13461	319 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	GATD1	Q8NB37	220 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	NPB	Q8NG41	125 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	NAA38	Q9BRA0	125 aa	Known RBP	10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071		A0A096LNJ9	63 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	IGHV3-66	A0A0C4DH42	116 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	NDUFA3	O95167	84 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	SEC11A	P67812	179 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	ECSCR	Q19T08	205 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	IGHV3OR16-13	A0A075B7E8	117 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	IGHV3-74	A0A0B4J1X5	117 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	CCL21	O00585	134 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	LGALS9B	Q3B8N2	356 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	LGALS9C	Q6DKI2	356 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	RAB37	Q96AX2	223 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	MAP1LC3A	Q9H492	121 aa		10.49	□□□□□ -0.73
SUPT20H-222	ENST00000495071	CDKN1B	P46527	198 aa		10.48	□□□□□ -0.73
SUPT20H-222	ENST00000495071	ZNF80	P51504	273 aa	Predicted RBP	10.48	□□□□□ -0.73
SUPT20H-222	ENST00000495071	MSRB1	Q9NZV6	116 aa		10.48	□□□□□ -0.73
SUPT20H-222	ENST00000495071	PRSS1	P07477	247 aa		10.48	□□□□□ -0.73
SUPT20H-222	ENST00000495071	PRTN3	P24158	256 aa		10.48	□□□□□ -0.73
SUPT20H-222	ENST00000495071	GAGE12B	A1L429	117 aa		10.48	□□□□□ -0.73
SUPT20H-222	ENST00000495071	EVI2A	P22794	236 aa		10.48	□□□□□ -0.73
SUPT20H-222	ENST00000495071	ERCC8	Q13216	396 aa		10.48	□□□□□ -0.73
SUPT20H-222	ENST00000495071	PRSS57	Q6UWY2	283 aa		10.48	□□□□□ -0.73
SUPT20H-222	ENST00000495071	VMO1	Q7Z5L0	202 aa		10.48	□□□□□ -0.73
SUPT20H-222	ENST00000495071	LY6G5B	Q8NDX9	201 aa		10.48	□□□□□ -0.73
SUPT20H-222	ENST00000495071	S100A7	P31151	101 aa		10.47	□□□□□ -0.73

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