RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 RXFP4Q8TDU9 374 aa15.35■□□□□ 0.05
HDDC3-203ENST00000494993 SAT2Q96F10 170 aaPredicted RBP15.35■□□□□ 0.05
HDDC3-203ENST00000494993 ZNF503Q96F45 646 aa15.35■□□□□ 0.05
HDDC3-203ENST00000494993 Q9H8V8 135 aa15.35■□□□□ 0.05
HDDC3-203ENST00000494993 ZNF701M0R085 212 aaPredicted RBP15.34■□□□□ 0.05
HDDC3-203ENST00000494993 A0A0J9YY99 117 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 GAGE12BA1L429 117 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 SNURFLB1AK76 121 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 H3BQ15 152 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 L7N2F9 121 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 GAGE7O76087 117 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 RLN2P04090 185 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 GAGE12FP0CL80 117 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 GAGE12GP0CL81 117 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 GAGE12IP0CL82 117 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 HOXA5P20719 270 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 CAMLGP49069 296 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 VAMP2P63027 116 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 CNPY1Q3B7I2 92 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 ODF3Q96PU9 254 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 DNAJC4Q9NNZ3 241 aa15.33■□□□□ 0.04
HDDC3-203ENST00000494993 J3KRW8 73 aa15.32■□□□□ 0.04
HDDC3-203ENST00000494993 CCSO14618 274 aa15.32■□□□□ 0.04
HDDC3-203ENST00000494993 LEPP41159 167 aa15.32■□□□□ 0.04
HDDC3-203ENST00000494993 TTC32Q5I0X7 151 aa15.32■□□□□ 0.04
HDDC3-203ENST00000494993 KRTAP1-5Q9BYS1 174 aa15.32■□□□□ 0.04
HDDC3-203ENST00000494993 APOBP04114 4563 aaKnown RBP15.31■□□□□ 0.04
HDDC3-203ENST00000494993 NPIPB6E9PJ23 425 aa15.31■□□□□ 0.04
HDDC3-203ENST00000494993 CT45A10P0DMU9 189 aa15.31■□□□□ 0.04
HDDC3-203ENST00000494993 IL7P13232 177 aa15.31■□□□□ 0.04
HDDC3-203ENST00000494993 RAB31Q13636 194 aa15.31■□□□□ 0.04
HDDC3-203ENST00000494993 GUK1Q16774 197 aa15.31■□□□□ 0.04
HDDC3-203ENST00000494993 MIC13Q5XKP0 118 aa15.31■□□□□ 0.04
HDDC3-203ENST00000494993 Q6ZRG5 221 aa15.31■□□□□ 0.04
HDDC3-203ENST00000494993 NRARPQ7Z6K4 114 aa15.31■□□□□ 0.04
HDDC3-203ENST00000494993 UPK3BQ9BT76 320 aa15.31■□□□□ 0.04
HDDC3-203ENST00000494993 LSM5Q9Y4Y9 91 aaKnown RBP15.31■□□□□ 0.04
HDDC3-203ENST00000494993 TRAV5A0A0B4J249 113 aa15.3■□□□□ 0.04
HDDC3-203ENST00000494993 TRAV12-3A0A0B4J271 114 aa15.3■□□□□ 0.04
HDDC3-203ENST00000494993 H3BNG1 76 aa15.3■□□□□ 0.04
HDDC3-203ENST00000494993 BCAP31P51572 246 aa15.3■□□□□ 0.04
HDDC3-203ENST00000494993 ZNF846Q147U1 533 aa15.3■□□□□ 0.04
HDDC3-203ENST00000494993 MAPKAPK5-AS1Q8N8E1 139 aa15.3■□□□□ 0.04
HDDC3-203ENST00000494993 OR1L4Q8NGR5 311 aa15.3■□□□□ 0.04
HDDC3-203ENST00000494993 PYGO2Q9BRQ0 406 aa15.3■□□□□ 0.04
HDDC3-203ENST00000494993 C20orf85Q9H1P6 137 aa15.3■□□□□ 0.04
HDDC3-203ENST00000494993 Q9H3A6 140 aa15.3■□□□□ 0.04
HDDC3-203ENST00000494993 DNAH5Q8TE73 4624 aa15.29■□□□□ 0.04
HDDC3-203ENST00000494993 ESRGQ1W209 222 aa15.29■□□□□ 0.04
HDDC3-203ENST00000494993 SPATA12Q7Z6I5 190 aa15.29■□□□□ 0.04
HDDC3-203ENST00000494993 ZNF431Q8TF32 576 aaPredicted RBP15.29■□□□□ 0.04
HDDC3-203ENST00000494993 ZNF586Q9NXT0 402 aa15.29■□□□□ 0.04
HDDC3-203ENST00000494993 WDR83OSQ9Y284 106 aa15.29■□□□□ 0.04
HDDC3-203ENST00000494993 CST7O76096 145 aa15.28■□□□□ 0.04
HDDC3-203ENST00000494993 CAV2P51636 162 aa15.28■□□□□ 0.04
HDDC3-203ENST00000494993 DAZ2Q13117 558 aaKnown RBP15.28■□□□□ 0.04
HDDC3-203ENST00000494993 PFDN5Q99471 154 aa15.28■□□□□ 0.04
HDDC3-203ENST00000494993 TMPRSS5Q9H3S3 457 aa15.28■□□□□ 0.04
HDDC3-203ENST00000494993 C11orf1Q9H5F2 150 aa15.28■□□□□ 0.04
HDDC3-203ENST00000494993 UQCC1Q9NVA1 299 aa15.28■□□□□ 0.04
HDDC3-203ENST00000494993 MRPS16Q9Y3D3 137 aaKnown RBP15.28■□□□□ 0.04
HDDC3-203ENST00000494993 A0A1W2PPQ1 181 aa15.27■□□□□ 0.04
HDDC3-203ENST00000494993 FAM24AA6NFZ4 105 aa15.27■□□□□ 0.04
HDDC3-203ENST00000494993 FAM25EA8MYX2 175 aa15.27■□□□□ 0.04
HDDC3-203ENST00000494993 ZNF253O75346 499 aa15.27■□□□□ 0.04
HDDC3-203ENST00000494993 Q6ZTI0 123 aa15.27■□□□□ 0.04
HDDC3-203ENST00000494993 PLA2G10O15496 165 aa15.26■□□□□ 0.03
HDDC3-203ENST00000494993 VWC2Q2TAL6 325 aa15.26■□□□□ 0.03
HDDC3-203ENST00000494993 MRPL53Q96EL3 112 aaKnown RBP15.26■□□□□ 0.03
HDDC3-203ENST00000494993 C5orf51A6NDU8 294 aa15.25■□□□□ 0.03
HDDC3-203ENST00000494993 SLC25A5P05141 298 aaKnown RBP15.25■□□□□ 0.03
HDDC3-203ENST00000494993 RPL29P47914 159 aaKnown RBP15.25■□□□□ 0.03
HDDC3-203ENST00000494993 SLC39A9Q9NUM3 307 aa15.25■□□□□ 0.03
HDDC3-203ENST00000494993 TRBV19A0A075B6N1 114 aa15.24■□□□□ 0.03
HDDC3-203ENST00000494993 UBE2L5PA0A1B0GUS4 154 aa15.24■□□□□ 0.03
HDDC3-203ENST00000494993 C7orf71A4D174 169 aa15.24■□□□□ 0.03
HDDC3-203ENST00000494993 M0R3E3 92 aa15.24■□□□□ 0.03
HDDC3-203ENST00000494993 LYRM1O43325 122 aa15.24■□□□□ 0.03
HDDC3-203ENST00000494993 BAXQ07812 192 aa15.24■□□□□ 0.03
HDDC3-203ENST00000494993 ERCC8Q13216 396 aa15.24■□□□□ 0.03
HDDC3-203ENST00000494993 C12orf45Q8N5I9 185 aaPredicted RBP15.24■□□□□ 0.03
HDDC3-203ENST00000494993 C11orf72Q8NBR9 251 aa15.24■□□□□ 0.03
HDDC3-203ENST00000494993 ZNF680Q8NEM1 530 aa15.24■□□□□ 0.03
HDDC3-203ENST00000494993 SEC22CQ9BRL7 303 aa15.24■□□□□ 0.03
HDDC3-203ENST00000494993 TCRBP04435 133 aa15.23■□□□□ 0.03
HDDC3-203ENST00000494993 BTF3P20290 206 aaKnown RBP15.23■□□□□ 0.03
HDDC3-203ENST00000494993 PVALBP20472 110 aaPredicted RBP15.23■□□□□ 0.03
HDDC3-203ENST00000494993 SULT1A1P50225 295 aa15.23■□□□□ 0.03
HDDC3-203ENST00000494993 VSIG2Q96IQ7 327 aa15.23■□□□□ 0.03
HDDC3-203ENST00000494993 C2orf50Q96LR7 162 aa15.23■□□□□ 0.03
HDDC3-203ENST00000494993 C18orf15Q96N68 181 aa15.23■□□□□ 0.03
HDDC3-203ENST00000494993 GSN-AS1Q9NRJ2 163 aa15.23■□□□□ 0.03
HDDC3-203ENST00000494993 LYRM2Q9NU23 88 aaPredicted RBP15.23■□□□□ 0.03
HDDC3-203ENST00000494993 TMEM14CQ9P0S9 112 aa15.23■□□□□ 0.03
HDDC3-203ENST00000494993 TRGV2A0A075B6R0 118 aa15.22■□□□□ 0.03
HDDC3-203ENST00000494993 TRAV6A0A075B6T7 132 aa15.22■□□□□ 0.03
HDDC3-203ENST00000494993 A0A096LPF7 62 aa15.22■□□□□ 0.03
HDDC3-203ENST00000494993 KLLNB2CW77 178 aa15.22■□□□□ 0.03
HDDC3-203ENST00000494993 S100A11P31949 105 aa15.22■□□□□ 0.03
HDDC3-203ENST00000494993 Q8N1X5 172 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms