RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 LOC400499M0QZD8 3231 aa7.97□□□□□ -1.13
LINC00488-201ENST00000494582 RAI1Q7Z5J4 1906 aaPredicted RBP7.97□□□□□ -1.13
LINC00488-201ENST00000494582 TRBV7-9A0A0J9YWB2 115 aa7.97□□□□□ -1.13
LINC00488-201ENST00000494582 SHISA9B4DS77 424 aa7.97□□□□□ -1.13
LINC00488-201ENST00000494582 ZZEF1O43149 2961 aa7.97□□□□□ -1.13
LINC00488-201ENST00000494582 CECR9P0C854 216 aa7.97□□□□□ -1.13
LINC00488-201ENST00000494582 ATP6V0E2Q8NHE4 81 aa7.97□□□□□ -1.13
LINC00488-201ENST00000494582 C8orf46Q8TAG6 207 aa7.97□□□□□ -1.13
LINC00488-201ENST00000494582 RNF185Q96GF1 192 aa7.97□□□□□ -1.13
LINC00488-201ENST00000494582 TRGV9Q99603 122 aa7.97□□□□□ -1.13
LINC00488-201ENST00000494582 TRBV6-1A0A0K0K1D8 114 aa7.96□□□□□ -1.13
LINC00488-201ENST00000494582 DPM2O94777 84 aa7.96□□□□□ -1.13
LINC00488-201ENST00000494582 IGLV2-23P01705 113 aa7.96□□□□□ -1.13
LINC00488-201ENST00000494582 LYZP61626 148 aa7.96□□□□□ -1.13
LINC00488-201ENST00000494582 TMEM75Q8N9X5 138 aa7.96□□□□□ -1.13
LINC00488-201ENST00000494582 PPP1R35Q8TAP8 253 aa7.96□□□□□ -1.13
LINC00488-201ENST00000494582 TMEM158Q8WZ71 300 aa7.96□□□□□ -1.13
LINC00488-201ENST00000494582 DEFB127Q9H1M4 99 aa7.96□□□□□ -1.13
LINC00488-201ENST00000494582 SPRR3Q9UBC9 169 aa7.96□□□□□ -1.13
LINC00488-201ENST00000494582 CTSZQ9UBR2 303 aa7.96□□□□□ -1.13
LINC00488-201ENST00000494582 SRSF6Q13247 344 aaKnown RBP7.96□□□□□ -1.14
LINC00488-201ENST00000494582 ZNF833PQ6ZTB9 187 aa7.96□□□□□ -1.14
LINC00488-201ENST00000494582 DEFB108BQ8NET1 73 aa7.96□□□□□ -1.14
LINC00488-201ENST00000494582 TMEM167AQ8TBQ9 72 aa7.96□□□□□ -1.14
LINC00488-201ENST00000494582 SLC25A39Q9BZJ4 359 aaPredicted RBP7.96□□□□□ -1.14
LINC00488-201ENST00000494582 MRPS17Q9Y2R5 130 aaKnown RBP7.96□□□□□ -1.14
LINC00488-201ENST00000494582 CSMD1Q96PZ7 3565 aa7.96□□□□□ -1.14
LINC00488-201ENST00000494582 SH2D1AO60880 128 aa7.95□□□□□ -1.14
LINC00488-201ENST00000494582 IGKV3-15P01624 115 aa7.95□□□□□ -1.14
LINC00488-201ENST00000494582 MEOX1P50221 254 aa7.95□□□□□ -1.14
LINC00488-201ENST00000494582 SIGLEC15Q6ZMC9 328 aa7.95□□□□□ -1.14
LINC00488-201ENST00000494582 FAM216BQ8N7L0 139 aa7.95□□□□□ -1.14
LINC00488-201ENST00000494582 TMEM133Q9H2Q1 129 aa7.95□□□□□ -1.14
LINC00488-201ENST00000494582 HIGD1AQ9Y241 93 aa7.95□□□□□ -1.14
LINC00488-201ENST00000494582 LINC01546A6NGU7 62 aa7.95□□□□□ -1.14
LINC00488-201ENST00000494582 TWIST1Q15672 202 aa7.95□□□□□ -1.14
LINC00488-201ENST00000494582 TAL2Q16559 108 aa7.95□□□□□ -1.14
LINC00488-201ENST00000494582 AJUBAQ96IF1 538 aa7.95□□□□□ -1.14
LINC00488-201ENST00000494582 DMXL2Q8TDJ6 3036 aa7.95□□□□□ -1.14
LINC00488-201ENST00000494582 TRBV19A0A075B6N1 114 aa7.94□□□□□ -1.14
LINC00488-201ENST00000494582 CCDC179H3BU77 68 aa7.94□□□□□ -1.14
LINC00488-201ENST00000494582 LHBP01229 141 aa7.94□□□□□ -1.14
LINC00488-201ENST00000494582 HLA-DRB4P13762 266 aa7.94□□□□□ -1.14
LINC00488-201ENST00000494582 PSMB2P49721 201 aa7.94□□□□□ -1.14
LINC00488-201ENST00000494582 CITED1Q99966 193 aa7.94□□□□□ -1.14
LINC00488-201ENST00000494582 RALYQ9UKM9 306 aaKnown RBP7.94□□□□□ -1.14
LINC00488-201ENST00000494582 HLA-DRB4X5D2U9 266 aa7.94□□□□□ -1.14
LINC00488-201ENST00000494582 SUB1P53999 127 aaKnown RBP eCLIP7.94□□□□□ -1.14
LINC00488-201ENST00000494582 SMIM20Q8N5G0 67 aa7.94□□□□□ -1.14
LINC00488-201ENST00000494582 CCL13Q99616 98 aa7.94□□□□□ -1.14
LINC00488-201ENST00000494582 FAM110AQ9BQ89 295 aa7.94□□□□□ -1.14
LINC00488-201ENST00000494582 TMEM14CQ9P0S9 112 aa7.94□□□□□ -1.14
LINC00488-201ENST00000494582 NDUFA3O95167 84 aa7.93□□□□□ -1.14
LINC00488-201ENST00000494582 EGR2P11161 476 aaPredicted RBP7.93□□□□□ -1.14
LINC00488-201ENST00000494582 DLX4Q92988 240 aaPredicted RBP7.93□□□□□ -1.14
LINC00488-201ENST00000494582 GAFA1Q96PS6 74 aa7.93□□□□□ -1.14
LINC00488-201ENST00000494582 PSMG3-AS1Q96PY0 264 aa7.93□□□□□ -1.14
LINC00488-201ENST00000494582 LINC01549A6NIU2 74 aa7.93□□□□□ -1.14
LINC00488-201ENST00000494582 HOXA3O43365 443 aaPredicted RBP7.93□□□□□ -1.14
LINC00488-201ENST00000494582 TNFRSF6BO95407 300 aa7.93□□□□□ -1.14
LINC00488-201ENST00000494582 ZNF80P51504 273 aaPredicted RBP7.93□□□□□ -1.14
LINC00488-201ENST00000494582 Q6ZS92 163 aa7.93□□□□□ -1.14
LINC00488-201ENST00000494582 OR10X1Q8NGY0 326 aa7.93□□□□□ -1.14
LINC00488-201ENST00000494582 MAP1LC3AQ9H492 121 aa7.93□□□□□ -1.14
LINC00488-201ENST00000494582 SPRY3O43610 288 aa7.92□□□□□ -1.14
LINC00488-201ENST00000494582 CNIH1O95406 144 aa7.92□□□□□ -1.14
LINC00488-201ENST00000494582 RPL32P62910 135 aaKnown RBP7.92□□□□□ -1.14
LINC00488-201ENST00000494582 PVRIGQ6DKI7 326 aa7.92□□□□□ -1.14
LINC00488-201ENST00000494582 ZFAND6Q6FIF0 208 aa7.92□□□□□ -1.14
LINC00488-201ENST00000494582 PPDPFLQ8WWR9 84 aa7.92□□□□□ -1.14
LINC00488-201ENST00000494582 LINC00574Q9H8X3 128 aa7.92□□□□□ -1.14
LINC00488-201ENST00000494582 IGLV2-18A0A075B6J9 118 aa7.92□□□□□ -1.14
LINC00488-201ENST00000494582 TRBV20-1A0A075B6N2 111 aa7.92□□□□□ -1.14
LINC00488-201ENST00000494582 IGHV1-18A0A0C4DH31 117 aa7.92□□□□□ -1.14
LINC00488-201ENST00000494582 THBDP07204 575 aa7.92□□□□□ -1.14
LINC00488-201ENST00000494582 CCL3L1P16619 93 aa7.92□□□□□ -1.14
LINC00488-201ENST00000494582 NGBQ9NPG2 151 aa7.92□□□□□ -1.14
LINC00488-201ENST00000494582 LOC107984156A0A0G2JMH3 177 aa7.91□□□□□ -1.14
LINC00488-201ENST00000494582 TGFAP01135 160 aa7.91□□□□□ -1.14
LINC00488-201ENST00000494582 TEN1Q86WV5 123 aa7.91□□□□□ -1.14
LINC00488-201ENST00000494582 ARL17AQ8IVW1 177 aa7.91□□□□□ -1.14
LINC00488-201ENST00000494582 C1orf210Q8IVY1 113 aa7.91□□□□□ -1.14
LINC00488-201ENST00000494582 IGKV2-40A0A087WW87 121 aaPredicted RBP7.91□□□□□ -1.14
LINC00488-201ENST00000494582 IGHV3-72A0A0B4J1Y9 119 aa7.91□□□□□ -1.14
LINC00488-201ENST00000494582 NTN3O00634 580 aaPredicted RBP7.91□□□□□ -1.14
LINC00488-201ENST00000494582 CRLF1O75462 422 aa7.91□□□□□ -1.14
LINC00488-201ENST00000494582 FCN3O75636 299 aa7.91□□□□□ -1.14
LINC00488-201ENST00000494582 IGKV2D-40P01614 121 aaPredicted RBP7.91□□□□□ -1.14
LINC00488-201ENST00000494582 IL4P05112 153 aa7.91□□□□□ -1.14
LINC00488-201ENST00000494582 LGALS1P09382 135 aaKnown RBP7.91□□□□□ -1.14
LINC00488-201ENST00000494582 IGLC6P0CF74 106 aa7.91□□□□□ -1.14
LINC00488-201ENST00000494582 CNTFRP26992 372 aa7.91□□□□□ -1.14
LINC00488-201ENST00000494582 EFNA4P52798 201 aa7.91□□□□□ -1.14
LINC00488-201ENST00000494582 PSMG4Q5JS54 123 aa7.91□□□□□ -1.14
LINC00488-201ENST00000494582 Q8TAT8 98 aa7.91□□□□□ -1.14
LINC00488-201ENST00000494582 MRPS12O15235 138 aaKnown RBP7.9□□□□□ -1.14
LINC00488-201ENST00000494582 ATP5LO75964 103 aa7.9□□□□□ -1.14
LINC00488-201ENST00000494582 TCL1BO95988 128 aa7.9□□□□□ -1.14
LINC00488-201ENST00000494582 IGKV1-17P01599 117 aa7.9□□□□□ -1.14
LINC00488-201ENST00000494582 CCL11P51671 97 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms