RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 EREGO14944 169 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 BUB3O43684 328 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 ARMS2P0C7Q2 107 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 IGLC3P0DOY3 106 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 GNLYP22749 145 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 CRIP2P52943 208 aaPredicted RBP7.5□□□□□ -1.21
NPHP3-209ENST00000493732 EBLN2Q6P2I7 272 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 CFAP161Q6P656 301 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 PET117Q6UWS5 81 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 C5orf56Q8N8D9 126 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 METTL26Q96S19 204 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 MAP1LC3CQ9BXW4 147 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 ARHGAP32A7KAX9 2087 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 IGHV1-24A0A0C4DH33 117 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 FABP5P3A8MUU1 101 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 SH2D1AO60880 128 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 IGHV3-23P01764 117 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 RPLP1P05386 114 aaKnown RBP7.5□□□□□ -1.21
NPHP3-209ENST00000493732 ATP5G2Q06055 141 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 LCN12Q6JVE5 192 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 URB1-AS1Q96HZ7 61 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 TMEM191AQ9H0A3 160 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 ZFAND3Q9H8U3 227 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 AP5S1Q9NUS5 200 aa7.5□□□□□ -1.21
NPHP3-209ENST00000493732 IGHV1-69DA0A0B4J2H0 117 aa7.49□□□□□ -1.21
NPHP3-209ENST00000493732 KALRNO60229 2985 aa7.49□□□□□ -1.21
NPHP3-209ENST00000493732 BRI3O95415 125 aa7.49□□□□□ -1.21
NPHP3-209ENST00000493732 IGHV1-69P01742 117 aa7.49□□□□□ -1.21
NPHP3-209ENST00000493732 BCL6BQ8N143 479 aaPredicted RBP7.49□□□□□ -1.21
NPHP3-209ENST00000493732 PRSS3P2Q8NHM4 247 aa7.49□□□□□ -1.21
NPHP3-209ENST00000493732 C8orf49Q96NF6 230 aa7.49□□□□□ -1.21
NPHP3-209ENST00000493732 MEGF9Q9H1U4 602 aa7.49□□□□□ -1.21
NPHP3-209ENST00000493732 SMAD5-AS1Q9Y6J3 95 aa7.49□□□□□ -1.21
NPHP3-209ENST00000493732 TRAV41A0A0B4J266 112 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 HSBP1L1C9JCN9 74 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 H3BUA1 57 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 SYS1-DBNDD2H3BUS1 97 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 TCAPO15273 167 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 IGHV4-39P01824 125 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 HNRNPA3P51991 378 aaKnown RBP7.48□□□□□ -1.21
NPHP3-209ENST00000493732 COL5A1-AS1Q5SY13 56 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 LYZL1Q6UWQ5 148 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 FA2HQ7L5A8 372 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 FER1L6-AS1Q8NA97 138 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 ASCL2Q99929 193 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 TPPP3Q9BW30 176 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 ST20Q9HBF5 79 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 MRPS16Q9Y3D3 137 aaKnown RBP7.48□□□□□ -1.21
NPHP3-209ENST00000493732 IGKV2-40A0A087WW87 121 aaPredicted RBP7.48□□□□□ -1.21
NPHP3-209ENST00000493732 IGKV2D-40P01614 121 aaPredicted RBP7.48□□□□□ -1.21
NPHP3-209ENST00000493732 UQCRFS1P47985 274 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 FAM104BQ5XKR9 115 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 CLEC2AQ6UVW9 174 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 CLEC19AQ6UXS0 136 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 Q6ZN92 141 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 ORMDL3Q8N138 153 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 OR10AG1Q8NH19 301 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 U3KQK5 164 aa7.48□□□□□ -1.21
NPHP3-209ENST00000493732 C19orf84I3L1E1 186 aa7.47□□□□□ -1.21
NPHP3-209ENST00000493732 PPBPP02775 128 aa7.47□□□□□ -1.21
NPHP3-209ENST00000493732 HIST1H1AQ02539 215 aaPredicted RBP7.47□□□□□ -1.21
NPHP3-209ENST00000493732 SPATA12Q7Z6I5 190 aa7.47□□□□□ -1.21
NPHP3-209ENST00000493732 C10orf105Q8TEF2 133 aa7.47□□□□□ -1.21
NPHP3-209ENST00000493732 CCDC140Q96MF4 163 aa7.47□□□□□ -1.21
NPHP3-209ENST00000493732 CCL19Q99731 98 aa7.47□□□□□ -1.21
NPHP3-209ENST00000493732 LAMTOR2Q9Y2Q5 125 aa7.47□□□□□ -1.21
NPHP3-209ENST00000493732 CBY1Q9Y3M2 126 aa7.47□□□□□ -1.21
NPHP3-209ENST00000493732 DCHS1Q96JQ0 3298 aa7.47□□□□□ -1.21
NPHP3-209ENST00000493732 NBASA2RRP1 2371 aa7.47□□□□□ -1.21
NPHP3-209ENST00000493732 OR4C46A6NHA9 309 aa7.46□□□□□ -1.21
NPHP3-209ENST00000493732 IGF1P05019 195 aa7.46□□□□□ -1.21
NPHP3-209ENST00000493732 IGLC6P0CF74 106 aa7.46□□□□□ -1.21
NPHP3-209ENST00000493732 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.46□□□□□ -1.21
NPHP3-209ENST00000493732 USMG5Q96IX5 58 aa7.46□□□□□ -1.21
NPHP3-209ENST00000493732 U3KQE9 123 aa7.46□□□□□ -1.21
NPHP3-209ENST00000493732 SMG1Q96Q15 3661 aaKnown RBP7.46□□□□□ -1.22
NPHP3-209ENST00000493732 HIVEP3Q5T1R4 2406 aa7.46□□□□□ -1.22
NPHP3-209ENST00000493732 G3V318 75 aa7.46□□□□□ -1.22
NPHP3-209ENST00000493732 IGHG4P01861 327 aa7.46□□□□□ -1.22
NPHP3-209ENST00000493732 DSCR9P59020 149 aa7.46□□□□□ -1.22
NPHP3-209ENST00000493732 LINC01559Q495D7 138 aa7.46□□□□□ -1.22
NPHP3-209ENST00000493732 C19orf54Q5BKX5 351 aa7.46□□□□□ -1.22
NPHP3-209ENST00000493732 TMEM78Q5T7P6 136 aa7.46□□□□□ -1.22
NPHP3-209ENST00000493732 PRELID3AQ96N28 172 aa7.46□□□□□ -1.22
NPHP3-209ENST00000493732 VGLL1Q99990 258 aa7.46□□□□□ -1.22
NPHP3-209ENST00000493732 CNFNQ9BYD5 112 aa7.46□□□□□ -1.22
NPHP3-209ENST00000493732 MS4A6AQ9H2W1 248 aa7.46□□□□□ -1.22
NPHP3-209ENST00000493732 LENEPQ9Y5L5 61 aa7.46□□□□□ -1.22
NPHP3-209ENST00000493732 COL6A6A6NMZ7 2263 aa7.46□□□□□ -1.22
NPHP3-209ENST00000493732 SPTBN1Q01082 2364 aaKnown RBP7.45□□□□□ -1.22
NPHP3-209ENST00000493732 CLPSL1A2RUU4 121 aa7.45□□□□□ -1.22
NPHP3-209ENST00000493732 ORM1P02763 201 aa7.45□□□□□ -1.22
NPHP3-209ENST00000493732 RNF224P0DH78 156 aa7.45□□□□□ -1.22
NPHP3-209ENST00000493732 GATA3P23771 443 aa7.45□□□□□ -1.22
NPHP3-209ENST00000493732 TWIST1Q15672 202 aa7.45□□□□□ -1.22
NPHP3-209ENST00000493732 ATRXP46100 2492 aa7.45□□□□□ -1.22
NPHP3-209ENST00000493732 TMSB15BA0A087X1C1 80 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 NDUFA4O00483 81 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 TRGV3P03979 118 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 CSN3P07498 182 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms