RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TEX50A0A1B0GTY4 177 aa7.31□□□□□ -1.24
BRCA1-219ENST00000491747 PSMB11A5LHX3 300 aa7.31□□□□□ -1.24
BRCA1-219ENST00000491747 CA1P00915 261 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-219ENST00000491747 MFAP2P55001 183 aa7.31□□□□□ -1.24
BRCA1-219ENST00000491747 STPG4Q8N801 248 aa7.31□□□□□ -1.24
BRCA1-219ENST00000491747 ORAOV1Q8WV07 137 aa7.31□□□□□ -1.24
BRCA1-219ENST00000491747 TPSG1Q9NRR2 321 aa7.31□□□□□ -1.24
BRCA1-219ENST00000491747 ZNF355PQ9NSJ1 428 aa7.31□□□□□ -1.24
BRCA1-219ENST00000491747 MRPS16Q9Y3D3 137 aaKnown RBP7.31□□□□□ -1.24
BRCA1-219ENST00000491747 A0A1W2PRX2 142 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 IGLV2-23P01705 113 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 HLA-DRB1P01911 266 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 RNASE2P10153 161 aaKnown RBP7.3□□□□□ -1.24
BRCA1-219ENST00000491747 HIST1H1EP10412 219 aaKnown RBP7.3□□□□□ -1.24
BRCA1-219ENST00000491747 TSPOP30536 169 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 ERHP84090 104 aaKnown RBP7.3□□□□□ -1.24
BRCA1-219ENST00000491747 NDPQ00604 133 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 PDPNQ86YL7 162 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 NHLRC2Q8NBF2 726 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 FAM110DQ8TAY7 271 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-219ENST00000491747 GRAMD2BQ96HH9 432 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 TNCP24821 2201 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 SRRM4A7MD48 611 aaKnown RBP7.3□□□□□ -1.24
BRCA1-219ENST00000491747 M0R2Z0 102 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 COX7A2P2O60397 106 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 APOA2P02652 100 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 CFHR3Q02985 330 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 KLF5Q13887 457 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-219ENST00000491747 C18orf65Q6ZTR6 163 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 NDUFA11Q86Y39 141 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 OR1L4Q8NGR5 311 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 OSR1Q8TAX0 266 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-219ENST00000491747 FLYWCH2Q96CP2 140 aaKnown RBP7.3□□□□□ -1.24
BRCA1-219ENST00000491747 FAM167A-AS1Q96KT0 104 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 RNF5Q99942 180 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 SLC25A2Q9BXI2 301 aa7.3□□□□□ -1.24
BRCA1-219ENST00000491747 TRAV9-2A0A087WT02 112 aa7.29□□□□□ -1.24
BRCA1-219ENST00000491747 TCRBV4S1A1TA0A5B7 111 aa7.29□□□□□ -1.24
BRCA1-219ENST00000491747 PEX7O00628 323 aa7.29□□□□□ -1.24
BRCA1-219ENST00000491747 ATP6V0E1O15342 81 aa7.29□□□□□ -1.24
BRCA1-219ENST00000491747 IGF1P05019 195 aa7.29□□□□□ -1.24
BRCA1-219ENST00000491747 CRYGBP07316 175 aa7.29□□□□□ -1.24
BRCA1-219ENST00000491747 SAA1P0DJI8 122 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-219ENST00000491747 EGR2P11161 476 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-219ENST00000491747 TNXAQ16473 311 aa7.29□□□□□ -1.24
BRCA1-219ENST00000491747 MRGPRG-AS1Q2M3A8 158 aa7.29□□□□□ -1.24
BRCA1-219ENST00000491747 FAM162BQ5T6X4 162 aa7.29□□□□□ -1.24
BRCA1-219ENST00000491747 LCNL1Q6ZST4 164 aa7.29□□□□□ -1.24
BRCA1-219ENST00000491747 ATP5L2Q7Z4Y8 100 aa7.29□□□□□ -1.24
BRCA1-219ENST00000491747 NUP35Q8NFH5 326 aa7.29□□□□□ -1.24
BRCA1-219ENST00000491747 PAXXQ9BUH6 204 aa7.29□□□□□ -1.24
BRCA1-219ENST00000491747 WNK1Q9H4A3 2382 aa7.29□□□□□ -1.24
BRCA1-219ENST00000491747 TRAV34A0A0B4J273 112 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 G3V318 75 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 SLC25A17O43808 307 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 OR2J3O76001 311 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 NDUFB8O95169 186 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 PTTG1IPP53801 180 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 UBE2G1P62253 170 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 SSBP2P81877 361 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-219ENST00000491747 MLANAQ16655 118 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 C21orf62-AS1Q17RA5 79 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 TMEM177Q53S58 311 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 C10orf113Q5VZT2 155 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 ATOH7Q8N100 152 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 NUDT10Q8NFP7 164 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 OR4X2Q8NGF9 303 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 SMIM12Q96EX1 92 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 NUDT11Q96G61 164 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 LINC00479Q96M42 142 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 TRAV5A0A0B4J249 113 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 A0A1W2PN81 502 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 HIGD1CA8MV81 97 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 RPL8P62917 257 aaKnown RBP7.28□□□□□ -1.24
BRCA1-219ENST00000491747 MORN5Q5VZ52 161 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 LCN12Q6JVE5 192 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 RNASEKQ6P5S7 137 aaKnown RBP7.28□□□□□ -1.24
BRCA1-219ENST00000491747 ZNF738Q8NE65 137 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 OR10W1Q8NGF6 305 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 HARBI1Q96MB7 349 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 ALKBH7Q9BT30 221 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-219ENST00000491747 NDUFA4L2Q9NRX3 87 aa7.28□□□□□ -1.24
BRCA1-219ENST00000491747 INS-IGF2F8WCM5 200 aa7.27□□□□□ -1.24
BRCA1-219ENST00000491747 PPIFP30405 207 aaKnown RBP7.27□□□□□ -1.24
BRCA1-219ENST00000491747 PLGLAQ15195 96 aa7.27□□□□□ -1.24
BRCA1-219ENST00000491747 Q56UQ5 140 aa7.27□□□□□ -1.24
BRCA1-219ENST00000491747 C19orf54Q5BKX5 351 aa7.27□□□□□ -1.24
BRCA1-219ENST00000491747 PRR27Q6MZM9 219 aa7.27□□□□□ -1.24
BRCA1-219ENST00000491747 STXBP6Q8NFX7 210 aa7.27□□□□□ -1.24
BRCA1-219ENST00000491747 ZNF430Q9H8G1 570 aaPredicted RBP7.27□□□□□ -1.24
BRCA1-219ENST00000491747 TSSC4Q9Y5U2 329 aaPredicted RBP7.27□□□□□ -1.24
BRCA1-219ENST00000491747 PYYP10082 97 aa7.27□□□□□ -1.25
BRCA1-219ENST00000491747 PCP4P48539 62 aa7.27□□□□□ -1.25
BRCA1-219ENST00000491747 HINT1P49773 126 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-219ENST00000491747 CAMPP49913 170 aa7.27□□□□□ -1.25
BRCA1-219ENST00000491747 SUB1P53999 127 aaKnown RBP eCLIP7.27□□□□□ -1.25
BRCA1-219ENST00000491747 VSTM2AQ8TAG5 236 aa7.27□□□□□ -1.25
BRCA1-219ENST00000491747 ZNF580Q9UK33 172 aa7.27□□□□□ -1.25
BRCA1-219ENST00000491747 COX11Q9Y6N1 276 aa7.27□□□□□ -1.25
BRCA1-219ENST00000491747 IGHG4P01861 327 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms