RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 FAM3BP58499 235 aaPredicted RBP10.6□□□□□ -0.71
SMPD4-219ENST00000491128 S100A7AQ86SG5 101 aa10.6□□□□□ -0.71
SMPD4-219ENST00000491128 KLHL30-AS1Q8NEE0 82 aa10.6□□□□□ -0.71
SMPD4-219ENST00000491128 U3KQE9 123 aa10.6□□□□□ -0.71
SMPD4-219ENST00000491128 CA1P00915 261 aaPredicted RBP10.6□□□□□ -0.71
SMPD4-219ENST00000491128 WFDC3Q8IUB2 231 aa10.6□□□□□ -0.71
SMPD4-219ENST00000491128 MYOZ3Q8TDC0 251 aa10.6□□□□□ -0.71
SMPD4-219ENST00000491128 DAZ1Q9NQZ3 744 aaKnown RBP10.6□□□□□ -0.71
SMPD4-219ENST00000491128 TMEM160Q9NX00 188 aa10.6□□□□□ -0.71
SMPD4-219ENST00000491128 GALR1P47211 349 aa10.59□□□□□ -0.71
SMPD4-219ENST00000491128 TFPI2P48307 235 aa10.59□□□□□ -0.71
SMPD4-219ENST00000491128 FAM106AQ4KMX7 169 aa10.59□□□□□ -0.71
SMPD4-219ENST00000491128 SFRP2Q96HF1 295 aa10.59□□□□□ -0.71
SMPD4-219ENST00000491128 CITED2Q99967 270 aaPredicted RBP10.59□□□□□ -0.71
SMPD4-219ENST00000491128 AAMDCQ9H7C9 122 aa10.59□□□□□ -0.71
SMPD4-219ENST00000491128 ZNF331Q9NQX6 463 aaPredicted RBP10.59□□□□□ -0.71
SMPD4-219ENST00000491128 ERVFC1-1P60608 527 aa10.59□□□□□ -0.71
SMPD4-219ENST00000491128 ERCC8Q13216 396 aa10.59□□□□□ -0.71
SMPD4-219ENST00000491128 C16orf54Q6UWD8 224 aa10.59□□□□□ -0.71
SMPD4-219ENST00000491128 C1QL4Q86Z23 238 aa10.59□□□□□ -0.71
SMPD4-219ENST00000491128 Q8TAT8 98 aa10.59□□□□□ -0.71
SMPD4-219ENST00000491128 GLMPQ8WWB7 406 aa10.59□□□□□ -0.71
SMPD4-219ENST00000491128 SORL1Q92673 2214 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 IGHV7-4-1A0A0J9YVY3 117 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 H7BYZ3 331 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 CLDN34H7C241 214 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 IGLV2-11P01706 119 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 MT-ND4LP03901 98 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 SSTP61278 116 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 ELOBQ15370 118 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 LINC00322Q6ZN03 302 aaPredicted RBP10.58□□□□□ -0.72
SMPD4-219ENST00000491128 GPHB5Q86YW7 130 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 ATP6V0BQ99437 205 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 VGLL1Q99990 258 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 TCEAL7Q9BRU2 100 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 TRAV8-2A0A0B4J237 113 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 TMEM213A2RRL7 107 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 TMEM89A2RUT3 159 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 DIRC3C9JPN6 131 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 CHEK1O14757 476 aa10.58□□□□□ -0.72
SMPD4-219ENST00000491128 C9JCJ5 164 aa10.57□□□□□ -0.72
SMPD4-219ENST00000491128 TMEM183BQ1AE95 376 aa10.57□□□□□ -0.72
SMPD4-219ENST00000491128 RNF152Q8N8N0 203 aa10.57□□□□□ -0.72
SMPD4-219ENST00000491128 ATRQ13535 2644 aa10.57□□□□□ -0.72
SMPD4-219ENST00000491128 A0A087WWC5 75 aa10.57□□□□□ -0.72
SMPD4-219ENST00000491128 B4DEV8 164 aa10.57□□□□□ -0.72
SMPD4-219ENST00000491128 C20orf173Q96LM9 149 aa10.57□□□□□ -0.72
SMPD4-219ENST00000491128 SPINK4O60575 86 aa10.56□□□□□ -0.72
SMPD4-219ENST00000491128 TCL1AP56279 114 aa10.56□□□□□ -0.72
SMPD4-219ENST00000491128 SCGB2A2Q13296 93 aa10.56□□□□□ -0.72
SMPD4-219ENST00000491128 PDE6HQ13956 83 aa10.56□□□□□ -0.72
SMPD4-219ENST00000491128 LCN12Q6JVE5 192 aa10.56□□□□□ -0.72
SMPD4-219ENST00000491128 C16orf92Q96LL3 132 aa10.56□□□□□ -0.72
SMPD4-219ENST00000491128 C8orf49Q96NF6 230 aa10.56□□□□□ -0.72
SMPD4-219ENST00000491128 SMPXQ9UHP9 88 aa10.56□□□□□ -0.72
SMPD4-219ENST00000491128 RNF24Q9Y225 148 aa10.56□□□□□ -0.72
SMPD4-219ENST00000491128 MAST4O15021 2626 aa10.56□□□□□ -0.72
SMPD4-219ENST00000491128 A0A1W2PPQ1 181 aa10.56□□□□□ -0.72
SMPD4-219ENST00000491128 CDX1P47902 265 aaPredicted RBP10.56□□□□□ -0.72
SMPD4-219ENST00000491128 OR10G8Q8NGN5 311 aa10.56□□□□□ -0.72
SMPD4-219ENST00000491128 YPEL4Q96NS1 127 aa10.56□□□□□ -0.72
SMPD4-219ENST00000491128 RNF114Q9Y508 228 aa10.56□□□□□ -0.72
SMPD4-219ENST00000491128 TRRAPQ9Y4A5 3859 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 RAB5AP20339 215 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 PSG9Q00887 426 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 PRR31Q5SQ13 230 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 C1orf194Q5T5A4 169 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 OR1N2Q8NGR9 330 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 DPF1Q92782 380 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 DLX4Q92988 240 aaPredicted RBP10.55□□□□□ -0.72
SMPD4-219ENST00000491128 KLF12Q9Y4X4 402 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 VWFP04275 2813 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 F6UB75 175 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 TAS2R60P59551 318 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 TCF24Q7RTU0 167 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 Q86TA4 180 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 GPR82Q96P67 336 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 TUBA4BQ9H853 241 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 PSG8Q9UQ74 426 aa10.55□□□□□ -0.72
SMPD4-219ENST00000491128 CSN1S1P47710 185 aa10.54□□□□□ -0.72
SMPD4-219ENST00000491128 IBA57Q5T440 356 aaKnown RBP10.54□□□□□ -0.72
SMPD4-219ENST00000491128 ADAMTSL5Q6ZMM2 481 aa10.54□□□□□ -0.72
SMPD4-219ENST00000491128 LYPD1Q8N2G4 141 aa10.54□□□□□ -0.72
SMPD4-219ENST00000491128 FMC1Q96HJ9 113 aa10.54□□□□□ -0.72
SMPD4-219ENST00000491128 GPR61Q9BZJ8 451 aa10.54□□□□□ -0.72
SMPD4-219ENST00000491128 TCF21O43680 179 aa10.54□□□□□ -0.72
SMPD4-219ENST00000491128 GCGP01275 180 aa10.54□□□□□ -0.72
SMPD4-219ENST00000491128 LTAP01374 205 aa10.54□□□□□ -0.72
SMPD4-219ENST00000491128 FRMD6-AS1P0C7T7 363 aa10.54□□□□□ -0.72
SMPD4-219ENST00000491128 PSG3Q16557 428 aa10.54□□□□□ -0.72
SMPD4-219ENST00000491128 WIPF2Q8TF74 440 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-219ENST00000491128 C4orf3Q8WVX3 66 aa10.54□□□□□ -0.72
SMPD4-219ENST00000491128 RAX2Q96IS3 184 aa10.54□□□□□ -0.72
SMPD4-219ENST00000491128 LINC01619G3V211 115 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 CBLN1P23435 193 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 RPS10P46783 165 aaKnown RBP10.53□□□□□ -0.72
SMPD4-219ENST00000491128 KRTAP10-3P60369 221 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 KLF5Q13887 457 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-219ENST00000491128 NSUN5P1Q3KNT7 163 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 WFDC12Q8WWY7 111 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms