RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 APOHP02749 345 aaPredicted RBP11.63□□□□□ -0.55
COL9A1-208ENST00000489611 BMI1P35226 326 aa11.63□□□□□ -0.55
COL9A1-208ENST00000489611 SRSF2Q01130 221 aaKnown RBP11.63□□□□□ -0.55
COL9A1-208ENST00000489611 PMCHL1Q16048 86 aa11.63□□□□□ -0.55
COL9A1-208ENST00000489611 SLC50A1Q9BRV3 221 aa11.63□□□□□ -0.55
COL9A1-208ENST00000489611 SSBP4Q9BWG4 385 aaPredicted RBP11.63□□□□□ -0.55
COL9A1-208ENST00000489611 CLEC5AQ9NY25 188 aa11.63□□□□□ -0.55
COL9A1-208ENST00000489611 WNK2Q9Y3S1 2297 aa11.63□□□□□ -0.55
COL9A1-208ENST00000489611 LOC102724200A0A096LPH7 203 aaPredicted RBP11.62□□□□□ -0.55
COL9A1-208ENST00000489611 RBAKDNA6NC62 111 aa11.62□□□□□ -0.55
COL9A1-208ENST00000489611 CLEC3BP05452 202 aa11.62□□□□□ -0.55
COL9A1-208ENST00000489611 GPR183P32249 361 aa11.62□□□□□ -0.55
COL9A1-208ENST00000489611 NIT1Q86X76 327 aa11.62□□□□□ -0.55
COL9A1-208ENST00000489611 C2orf88Q9BSF0 95 aa11.62□□□□□ -0.55
COL9A1-208ENST00000489611 ZFAND3Q9H8U3 227 aa11.62□□□□□ -0.55
COL9A1-208ENST00000489611 LRRK2Q5S007 2527 aa11.62□□□□□ -0.55
COL9A1-208ENST00000489611 M0R3E3 92 aa11.62□□□□□ -0.55
COL9A1-208ENST00000489611 TACC2O95359 2948 aa11.61□□□□□ -0.55
COL9A1-208ENST00000489611 M0QZK8 103 aa11.61□□□□□ -0.55
COL9A1-208ENST00000489611 BUB3O43684 328 aa11.61□□□□□ -0.55
COL9A1-208ENST00000489611 IGHV3-23P01764 117 aa11.61□□□□□ -0.55
COL9A1-208ENST00000489611 OR5AL1P0C617 328 aa11.61□□□□□ -0.55
COL9A1-208ENST00000489611 DSCR9P59020 149 aa11.61□□□□□ -0.55
COL9A1-208ENST00000489611 ZNF785A8K8V0 405 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 H3BUA1 57 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 M0R2Z0 102 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 ATP5J2P56134 94 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 KRTAP10-9P60411 292 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 ATP5G2Q06055 141 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 RNASEKQ6P5S7 137 aaKnown RBP11.6□□□□□ -0.55
COL9A1-208ENST00000489611 ZNF493Q6ZR52 646 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 BCL6BQ8N143 479 aaPredicted RBP11.6□□□□□ -0.55
COL9A1-208ENST00000489611 MRPL53Q96EL3 112 aaKnown RBP11.6□□□□□ -0.55
COL9A1-208ENST00000489611 PRR25Q96S07 402 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 MIEN1Q9BRT3 115 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 TRAV41A0A0B4J266 112 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 TMEM189A5PLL7 270 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 C3orf79P0CE67 100 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 NTF3P20783 257 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 METTL26Q96S19 204 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 HIF1ANQ9NWT6 349 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 SMAD5-AS1Q9Y6J3 95 aa11.6□□□□□ -0.55
COL9A1-208ENST00000489611 C20orf202A1L168 122 aa11.59□□□□□ -0.55
COL9A1-208ENST00000489611 FAM181BA6NEQ2 426 aa11.59□□□□□ -0.55
COL9A1-208ENST00000489611 BTF3P20290 206 aaKnown RBP11.59□□□□□ -0.55
COL9A1-208ENST00000489611 GATA3P23771 443 aa11.59□□□□□ -0.55
COL9A1-208ENST00000489611 CRIP1P50238 77 aa11.59□□□□□ -0.55
COL9A1-208ENST00000489611 C19orf54Q5BKX5 351 aa11.59□□□□□ -0.55
COL9A1-208ENST00000489611 HIST2H2BCQ6DN03 193 aa11.59□□□□□ -0.55
COL9A1-208ENST00000489611 KLHDC1Q8N7A1 406 aa11.59□□□□□ -0.55
COL9A1-208ENST00000489611 CCDC140Q96MF4 163 aa11.59□□□□□ -0.55
COL9A1-208ENST00000489611 CRYBG3Q68DQ2 2970 aa11.59□□□□□ -0.55
COL9A1-208ENST00000489611 IGF1P05019 195 aa11.58□□□□□ -0.55
COL9A1-208ENST00000489611 CD33P20138 364 aa11.58□□□□□ -0.55
COL9A1-208ENST00000489611 FAM19A2Q8N3H0 131 aa11.58□□□□□ -0.55
COL9A1-208ENST00000489611 Q8N976 141 aa11.58□□□□□ -0.55
COL9A1-208ENST00000489611 IGHV4-61A0A0C4DH41 118 aa11.58□□□□□ -0.56
COL9A1-208ENST00000489611 M0R143 59 aa11.58□□□□□ -0.56
COL9A1-208ENST00000489611 LINC00614P0C842 121 aa11.58□□□□□ -0.56
COL9A1-208ENST00000489611 LCN12Q6JVE5 192 aa11.58□□□□□ -0.56
COL9A1-208ENST00000489611 CLEC19AQ6UXS0 136 aa11.58□□□□□ -0.56
COL9A1-208ENST00000489611 FBN2P35556 2912 aa11.57□□□□□ -0.56
COL9A1-208ENST00000489611 G3V318 75 aa11.57□□□□□ -0.56
COL9A1-208ENST00000489611 SH2D1AO60880 128 aa11.57□□□□□ -0.56
COL9A1-208ENST00000489611 ARMS2P0C7Q2 107 aa11.57□□□□□ -0.56
COL9A1-208ENST00000489611 CSMD2Q7Z408 3487 aa11.57□□□□□ -0.56
COL9A1-208ENST00000489611 TRAV40A0A0B4J280 105 aa11.56□□□□□ -0.56
COL9A1-208ENST00000489611 CRXO43186 299 aaPredicted RBP11.56□□□□□ -0.56
COL9A1-208ENST00000489611 MSMBP08118 114 aa11.56□□□□□ -0.56
COL9A1-208ENST00000489611 FOSL1P15407 271 aa11.56□□□□□ -0.56
COL9A1-208ENST00000489611 PIFOQ8TCI5 191 aa11.56□□□□□ -0.56
COL9A1-208ENST00000489611 USMG5Q96IX5 58 aa11.56□□□□□ -0.56
COL9A1-208ENST00000489611 C8orf49Q96NF6 230 aa11.56□□□□□ -0.56
COL9A1-208ENST00000489611 PAM16Q9Y3D7 125 aa11.56□□□□□ -0.56
COL9A1-208ENST00000489611 U3KQE9 123 aa11.56□□□□□ -0.56
COL9A1-208ENST00000489611 IGKV2-40A0A087WW87 121 aaPredicted RBP11.56□□□□□ -0.56
COL9A1-208ENST00000489611 IGKV2D-40P01614 121 aaPredicted RBP11.56□□□□□ -0.56
COL9A1-208ENST00000489611 PSMG3-AS1Q96PY0 264 aa11.56□□□□□ -0.56
COL9A1-208ENST00000489611 TMEM70Q9BUB7 260 aa11.56□□□□□ -0.56
COL9A1-208ENST00000489611 IGHV4-30-2A0A087WSY4 118 aa11.55□□□□□ -0.56
COL9A1-208ENST00000489611 CLPSL1A2RUU4 121 aa11.55□□□□□ -0.56
COL9A1-208ENST00000489611 FABP5P3A8MUU1 101 aa11.55□□□□□ -0.56
COL9A1-208ENST00000489611 B4DSR2 109 aa11.55□□□□□ -0.56
COL9A1-208ENST00000489611 IGHG4P01861 327 aa11.55□□□□□ -0.56
COL9A1-208ENST00000489611 CTRLP40313 264 aa11.55□□□□□ -0.56
COL9A1-208ENST00000489611 PPP1R14DQ9NXH3 145 aa11.55□□□□□ -0.56
COL9A1-208ENST00000489611 SPG11Q96JI7 2443 aa11.55□□□□□ -0.56
COL9A1-208ENST00000489611 IGHG2P01859 326 aa11.54□□□□□ -0.56
COL9A1-208ENST00000489611 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.54□□□□□ -0.56
COL9A1-208ENST00000489611 ASCL2Q99929 193 aa11.54□□□□□ -0.56
COL9A1-208ENST00000489611 ZNF580Q9UK33 172 aa11.54□□□□□ -0.56
COL9A1-208ENST00000489611 RNF114Q9Y508 228 aa11.54□□□□□ -0.56
COL9A1-208ENST00000489611 USP9YO00507 2555 aaPredicted RBP11.54□□□□□ -0.56
COL9A1-208ENST00000489611 C2orf70A6NJV1 201 aa11.54□□□□□ -0.56
COL9A1-208ENST00000489611 LINC01548A6NM66 108 aa11.54□□□□□ -0.56
COL9A1-208ENST00000489611 TMEM219Q86XT9 240 aa11.54□□□□□ -0.56
COL9A1-208ENST00000489611 URB1-AS1Q96HZ7 61 aa11.54□□□□□ -0.56
COL9A1-208ENST00000489611 TENM4Q6N022 2769 aa11.54□□□□□ -0.56
COL9A1-208ENST00000489611 LEPROTL1O95214 131 aa11.53□□□□□ -0.56
COL9A1-208ENST00000489611 TRGV3P03979 118 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms