RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 NUDT10Q8NFP7 164 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 DAZAP1Q96EP5 407 aaKnown RBP6.6□□□□□ -1.35
VTI1A-207ENST00000489357 NUDT11Q96G61 164 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 ZNF414Q96IQ9 312 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 RPP21Q9H633 154 aaKnown RBP6.6□□□□□ -1.35
VTI1A-207ENST00000489357 ZNF331Q9NQX6 463 aaPredicted RBP6.6□□□□□ -1.35
VTI1A-207ENST00000489357 GSN-AS1Q9NRJ2 163 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 SERTAD4Q9NUC0 356 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 CLEC5AQ9NY25 188 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 RNF114Q9Y508 228 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 A0A087X0K7 114 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 OR2J3O76001 311 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 P01737 135 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 CTSGP08311 255 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 IER3P46695 156 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 CSN1S1P47710 185 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 FOXA3P55318 350 aaPredicted RBP6.59□□□□□ -1.35
VTI1A-207ENST00000489357 TPPP2P59282 170 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 NDPQ00604 133 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 RELQ04864 619 aaPredicted RBP6.59□□□□□ -1.35
VTI1A-207ENST00000489357 IQCJQ1A5X6 159 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 KRTAP21-3Q3LHN1 58 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 GFI1BQ5VTD9 330 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 C16orf54Q6UWD8 224 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 TMEM136Q6ZRR5 245 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 C19orf35Q6ZS72 473 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 ZNF502Q8TBZ5 544 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 EEF1AKMT3Q96AZ1 226 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 FAM103A1Q9BTL3 118 aaKnown RBP6.59□□□□□ -1.35
VTI1A-207ENST00000489357 RABAC1Q9UI14 185 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 FBXL7Q9UJT9 491 aa6.59□□□□□ -1.35
VTI1A-207ENST00000489357 IGHV3-21A0A0B4J1V1 117 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 PCP4L1A6NKN8 68 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 B4DSR2 109 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 INAFM1C9JVW0 142 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 TSTD3H0UI37 97 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 IGLV2-11P01706 119 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 IGF1P05019 195 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 MSMBP08118 114 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 CBLN1P23435 193 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 CD24P25063 80 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 PSG3Q16557 428 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 C19orf54Q5BKX5 351 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 SAPCD1Q5SSQ6 148 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 UNQ5815/PRO19632Q6UWF5 114 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 RBPMS2Q6ZRY4 209 aaKnown RBP6.58□□□□□ -1.36
VTI1A-207ENST00000489357 MRPL53Q96EL3 112 aaKnown RBP6.58□□□□□ -1.36
VTI1A-207ENST00000489357 LINC00479Q96M42 142 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 NF1P21359 2839 aa6.58□□□□□ -1.36
VTI1A-207ENST00000489357 ATRQ13535 2644 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 A0A1B0GXF2 115 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 RBAKDNA6NC62 111 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 HIGD1CA8MV81 97 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 DIRC3C9JPN6 131 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 J3QLI3 93 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 ATP6V0E1O15342 81 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 APCSP02743 223 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 CT45A10P0DMU9 189 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 PKIAP61925 76 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 GNG5P63218 68 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 HBBP68871 147 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 C15orf32Q32M92 178 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 PDZD11Q5EBL8 140 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 LEMD1Q68G75 181 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 LINC01356Q8N9X3 169 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 NUP35Q8NFH5 326 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 USMG5Q96IX5 58 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 NEU1Q99519 415 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 HSPB9Q9BQS6 159 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 SLC50A1Q9BRV3 221 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 SVEP1Q4LDE5 3571 aa6.57□□□□□ -1.36
VTI1A-207ENST00000489357 TRAV34A0A0B4J273 112 aa6.56□□□□□ -1.36
VTI1A-207ENST00000489357 A8MWP6 167 aa6.56□□□□□ -1.36
VTI1A-207ENST00000489357 GZMBP10144 247 aa6.56□□□□□ -1.36
VTI1A-207ENST00000489357 RAB4AP20338 218 aa6.56□□□□□ -1.36
VTI1A-207ENST00000489357 CTAG1AP78358 180 aa6.56□□□□□ -1.36
VTI1A-207ENST00000489357 RHOGP84095 191 aa6.56□□□□□ -1.36
VTI1A-207ENST00000489357 SRSF2Q01130 221 aaKnown RBP6.56□□□□□ -1.36
VTI1A-207ENST00000489357 KLF5Q13887 457 aaPredicted RBP6.56□□□□□ -1.36
VTI1A-207ENST00000489357 FBLN7Q53RD9 439 aa6.56□□□□□ -1.36
VTI1A-207ENST00000489357 KLF17Q5JT82 389 aaPredicted RBP6.56□□□□□ -1.36
VTI1A-207ENST00000489357 GOLT1AQ6ZVE7 132 aa6.56□□□□□ -1.36
VTI1A-207ENST00000489357 TEX29Q8N6K0 151 aa6.56□□□□□ -1.36
VTI1A-207ENST00000489357 GATD1Q8NB37 220 aa6.56□□□□□ -1.36
VTI1A-207ENST00000489357 HIF1ANQ9NWT6 349 aa6.56□□□□□ -1.36
VTI1A-207ENST00000489357 X6R8D5 127 aa6.56□□□□□ -1.36
VTI1A-207ENST00000489357 PLXNB1O43157 2135 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 TRAV41A0A0B4J266 112 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 OR2T8A6NH00 312 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 TGFAP01135 160 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 IGHG2P01859 326 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 RPS20P60866 119 aaKnown RBP6.55□□□□□ -1.36
VTI1A-207ENST00000489357 ATP5G2Q06055 141 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 FAM120AOSQ5T036 256 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 PRR27Q6MZM9 219 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 TOMM20LQ6UXN7 152 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 BAGE3Q86Y29 109 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 Q8N1Y9 231 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 EXOC3-AS1Q8N2X6 119 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 NHLRC2Q8NBF2 726 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms