RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 TRBV6-7A0A0A0MS04 114 aa1.43□□□□□ -2.18
XRN1-213ENST00000489241 TRBV27A0A0K0K1C4 114 aa1.43□□□□□ -2.18
XRN1-213ENST00000489241 LOC107984640A0A0U1RRK4 108 aa1.43□□□□□ -2.18
XRN1-213ENST00000489241 C9orf170A2RU37 121 aa1.43□□□□□ -2.18
XRN1-213ENST00000489241 FABP4P15090 132 aa1.43□□□□□ -2.18
XRN1-213ENST00000489241 IL9P15248 144 aa1.43□□□□□ -2.18
XRN1-213ENST00000489241 OR5AS1Q8N127 324 aa1.43□□□□□ -2.18
XRN1-213ENST00000489241 OR4B1Q8NGF8 309 aa1.43□□□□□ -2.18
XRN1-213ENST00000489241 CCL4L1Q8NHW4 92 aa1.43□□□□□ -2.18
XRN1-213ENST00000489241 PRELID3AQ96N28 172 aa1.43□□□□□ -2.18
XRN1-213ENST00000489241 LXNQ9BS40 222 aa1.43□□□□□ -2.18
XRN1-213ENST00000489241 MYO5AQ9Y4I1 1855 aaKnown RBP1.43□□□□□ -2.18
XRN1-213ENST00000489241 MYH10P35580 1976 aa1.43□□□□□ -2.18
XRN1-213ENST00000489241 LAMB4A4D0S4 1761 aa1.42□□□□□ -2.18
XRN1-213ENST00000489241 TRAV13-1A0A0B4J241 112 aa1.42□□□□□ -2.18
XRN1-213ENST00000489241 J3KT08 172 aa1.42□□□□□ -2.18
XRN1-213ENST00000489241 CCL25O15444 150 aa1.42□□□□□ -2.18
XRN1-213ENST00000489241 ZNF25P17030 456 aaPredicted RBP1.42□□□□□ -2.18
XRN1-213ENST00000489241 RPS28P62857 69 aaKnown RBP1.42□□□□□ -2.18
XRN1-213ENST00000489241 MRPS36P82909 103 aaKnown RBP1.42□□□□□ -2.18
XRN1-213ENST00000489241 VMA21Q3ZAQ7 101 aa1.42□□□□□ -2.18
XRN1-213ENST00000489241 SPRNQ5BIV9 151 aa1.42□□□□□ -2.18
XRN1-213ENST00000489241 TMEM229BQ8NBD8 167 aa1.42□□□□□ -2.18
XRN1-213ENST00000489241 PSMF1Q92530 271 aa1.42□□□□□ -2.18
XRN1-213ENST00000489241 BORCS5Q969J3 196 aa1.42□□□□□ -2.18
XRN1-213ENST00000489241 CBLN4Q9NTU7 201 aa1.42□□□□□ -2.18
XRN1-213ENST00000489241 TPRKBQ9Y3C4 175 aa1.42□□□□□ -2.18
XRN1-213ENST00000489241 TCOF1Q13428 1488 aaKnown RBP1.42□□□□□ -2.18
XRN1-213ENST00000489241 RP1L1Q8IWN7 2480 aaPredicted RBP1.42□□□□□ -2.18
XRN1-213ENST00000489241 ARL5CA6NH57 179 aa1.41□□□□□ -2.18
XRN1-213ENST00000489241 F8W1H4 67 aa1.41□□□□□ -2.18
XRN1-213ENST00000489241 H3BMG7 143 aa1.41□□□□□ -2.18
XRN1-213ENST00000489241 NUPR1O60356 82 aa1.41□□□□□ -2.18
XRN1-213ENST00000489241 ANGP03950 147 aaKnown RBP1.41□□□□□ -2.18
XRN1-213ENST00000489241 CIRBPQ14011 172 aaKnown RBP1.41□□□□□ -2.18
XRN1-213ENST00000489241 GKN2Q86XP6 184 aa1.41□□□□□ -2.18
XRN1-213ENST00000489241 OR4C12Q96R67 309 aa1.41□□□□□ -2.18
XRN1-213ENST00000489241 CACNA1BQ00975 2339 aa1.41□□□□□ -2.18
XRN1-213ENST00000489241 ARAP1Q96P48 1450 aa1.41□□□□□ -2.18
XRN1-213ENST00000489241 A2MP01023 1474 aa1.4□□□□□ -2.19
XRN1-213ENST00000489241 TRAV36DV7A0A075B6V5 113 aa1.4□□□□□ -2.19
XRN1-213ENST00000489241 LOC105371267A0A1B0GV96 52 aa1.4□□□□□ -2.19
XRN1-213ENST00000489241 DNAL4O96015 105 aa1.4□□□□□ -2.19
XRN1-213ENST00000489241 COX7CP15954 63 aa1.4□□□□□ -2.19
XRN1-213ENST00000489241 MAXP61244 160 aa1.4□□□□□ -2.19
XRN1-213ENST00000489241 PSG9Q00887 426 aa1.4□□□□□ -2.19
XRN1-213ENST00000489241 OR8B8Q15620 311 aa1.4□□□□□ -2.19
XRN1-213ENST00000489241 ALX1Q15699 326 aa1.4□□□□□ -2.19
XRN1-213ENST00000489241 GDF5OSQ5U4N7 250 aa1.4□□□□□ -2.19
XRN1-213ENST00000489241 TEN1Q86WV5 123 aa1.4□□□□□ -2.19
XRN1-213ENST00000489241 MORN4Q8NDC4 146 aa1.4□□□□□ -2.19
XRN1-213ENST00000489241 ZNF431Q8TF32 576 aaPredicted RBP1.4□□□□□ -2.19
XRN1-213ENST00000489241 CECR2Q9BXF3 1484 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 CEP192Q8TEP8 1941 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 TNRC6BQ9UPQ9 1833 aaKnown RBP1.39□□□□□ -2.19
XRN1-213ENST00000489241 A0A1B0GX51 115 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 C5orf58C9J3I9 102 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 M0QZK8 103 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 DEGS1O15121 323 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 SCGB1A1P11684 91 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 FOXA3P55318 350 aaPredicted RBP1.39□□□□□ -2.19
XRN1-213ENST00000489241 LINC00269Q8N2A0 174 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 FAM19A2Q8N3H0 131 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 NAT14Q8WUY8 206 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 CLEC2BQ92478 149 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 LINC00526Q96FQ7 95 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 ODF3Q96PU9 254 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 BATF3Q9NR55 127 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 JPT1Q9UK76 154 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 DLC1Q96QB1 1528 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 MGAMO43451 1857 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 FAM135BQ49AJ0 1406 aa1.39□□□□□ -2.19
XRN1-213ENST00000489241 PRRC2BQ5JSZ5 2229 aaKnown RBP1.39□□□□□ -2.19
XRN1-213ENST00000489241 COL24A1Q17RW2 1714 aa1.38□□□□□ -2.19
XRN1-213ENST00000489241 H3BRM9 83 aa1.38□□□□□ -2.19
XRN1-213ENST00000489241 TPT1P13693 172 aaKnown RBP1.38□□□□□ -2.19
XRN1-213ENST00000489241 CRYGSP22914 178 aa1.38□□□□□ -2.19
XRN1-213ENST00000489241 RPL22P35268 128 aaKnown RBP1.38□□□□□ -2.19
XRN1-213ENST00000489241 DIAPH2-AS1Q14236 149 aa1.38□□□□□ -2.19
XRN1-213ENST00000489241 Q5XG85 94 aa1.38□□□□□ -2.19
XRN1-213ENST00000489241 FOXI2Q6ZQN5 318 aa1.38□□□□□ -2.19
XRN1-213ENST00000489241 OR10AG1Q8NH19 301 aa1.38□□□□□ -2.19
XRN1-213ENST00000489241 BRK1Q8WUW1 75 aa1.38□□□□□ -2.19
XRN1-213ENST00000489241 AIF1LQ9BQI0 150 aa1.38□□□□□ -2.19
XRN1-213ENST00000489241 CST11Q9H112 138 aa1.38□□□□□ -2.19
XRN1-213ENST00000489241 FKBP11Q9NYL4 201 aa1.38□□□□□ -2.19
XRN1-213ENST00000489241 FCGBPQ9Y6R7 5405 aaPredicted RBP1.38□□□□□ -2.19
XRN1-213ENST00000489241 SCN3AQ9NY46 2000 aa1.38□□□□□ -2.19
XRN1-213ENST00000489241 OVOS2A0A0G2JMS6 1433 aa1.38□□□□□ -2.19
XRN1-213ENST00000489241 SDC4P31431 198 aa1.37□□□□□ -2.19
XRN1-213ENST00000489241 SRP9P49458 86 aaKnown RBP1.37□□□□□ -2.19
XRN1-213ENST00000489241 MIR22HGQ0VDD5 57 aa1.37□□□□□ -2.19
XRN1-213ENST00000489241 LINC00322Q6ZN03 302 aaPredicted RBP1.37□□□□□ -2.19
XRN1-213ENST00000489241 ZCCHC23Q6ZST2 131 aa1.37□□□□□ -2.19
XRN1-213ENST00000489241 OR8I2Q8N0Y5 310 aa1.37□□□□□ -2.19
XRN1-213ENST00000489241 MRPL57Q9BQC6 102 aaKnown RBP1.37□□□□□ -2.19
XRN1-213ENST00000489241 SPANXA1Q9NS26 97 aa1.37□□□□□ -2.19
XRN1-213ENST00000489241 TMEM14CQ9P0S9 112 aa1.37□□□□□ -2.19
XRN1-213ENST00000489241 EXPH5Q8NEV8 1989 aa1.37□□□□□ -2.19
XRN1-213ENST00000489241 NUP210Q8TEM1 1887 aaPredicted RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms