RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 OR8A1Q8NGG7 326 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 ITPR1Q14643 2758 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 SHANK1Q9Y566 2161 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 IGHV3OR16-8A0A075B7F1 116 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 H3BUX3 64 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 M0R3E3 92 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 OVOL3O00110 214 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 ZNF207O43670 478 aaKnown RBP2.07□□□□□ -2.08
C9orf72-205ENST00000488117 NDPQ00604 133 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 TM4SF20Q53R12 229 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 BRD3OSQ6XYD6 125 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 GTSF1Q8WW33 167 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 LINC00477Q96M19 166 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 NPFFR1Q9GZQ6 430 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 MS4A6AQ9H2W1 248 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 ST20Q9HBF5 79 aa2.07□□□□□ -2.08
C9orf72-205ENST00000488117 KIAA2026Q5HYC2 2103 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 TRAV21A0A0B4J279 112 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 IGHV1-24A0A0C4DH33 117 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 D6R8Y8 96 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 G3V318 75 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 C19orf84I3L1E1 186 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 IGLV2-11P01706 119 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 G0S2P27469 103 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 LEPP41159 167 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 ASIPP42127 132 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 TMEM97Q5BJF2 176 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 FAM104BQ5XKR9 115 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 SLC25A34Q6PIV7 304 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 ATOH7Q8N100 152 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 NXT2Q9NPJ8 142 aaKnown RBP2.06□□□□□ -2.08
C9orf72-205ENST00000488117 TP53TG3Q9ULZ0 132 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 ZDBF2Q9HCK1 2354 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 SYS1-DBNDD2H3BUS1 97 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 PPP1R17O96001 155 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 HBDP02042 147 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 FRMD6-AS1P0C7T7 363 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 ERCC8Q13216 396 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 ZNF493Q6ZR52 646 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 C8orf86Q6ZUL3 223 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 OR4X2Q8NGF9 303 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 Q8TAT8 98 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 MYOZ3Q8TDC0 251 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 MEGF9Q9H1U4 602 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 IGHV3OR16-13A0A075B7E8 117 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 IGHV3-49A0A0A0MS15 119 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 IGHV3-74A0A0B4J1X5 117 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 IGHV4-61A0A0C4DH41 118 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 MRPS12O15235 138 aaKnown RBP2.06□□□□□ -2.08
C9orf72-205ENST00000488117 BUB3O43684 328 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 NUTF2P61970 127 aaKnown RBP2.06□□□□□ -2.08
C9orf72-205ENST00000488117 SNRPD3P62318 126 aaKnown RBP2.06□□□□□ -2.08
C9orf72-205ENST00000488117 LDLRAD2Q5SZI1 272 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 EBLN2Q6P2I7 272 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 C12orf54Q6X4T0 127 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 GATD1Q8NB37 220 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 SYT8Q8NBV8 401 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 VGLL1Q99990 258 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 GOLT1BQ9Y3E0 138 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 LENEPQ9Y5L5 61 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 PCNX2A6NKB5 2137 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 TCF21O43680 179 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 EGR2P11161 476 aaPredicted RBP2.06□□□□□ -2.08
C9orf72-205ENST00000488117 ZNF25P17030 456 aaPredicted RBP2.06□□□□□ -2.08
C9orf72-205ENST00000488117 TSPOP30536 169 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 CTRLP40313 264 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 GDF5OSQ5U4N7 250 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 IGFL4Q6B9Z1 124 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 C16orf54Q6UWD8 224 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 LINC00322Q6ZN03 302 aaPredicted RBP2.06□□□□□ -2.08
C9orf72-205ENST00000488117 IL17RELQ6ZVW7 336 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 RNF182Q8N6D2 247 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 LINC00469Q8N7U9 141 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 OR1N2Q8NGR9 330 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 ZFAND3Q9H8U3 227 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 MRPS16Q9Y3D3 137 aaKnown RBP2.06□□□□□ -2.08
C9orf72-205ENST00000488117 PHLDA3Q9Y5J5 127 aa2.06□□□□□ -2.08
C9orf72-205ENST00000488117 YLPM1P49750 1951 aaKnown RBP2.06□□□□□ -2.08
C9orf72-205ENST00000488117 TMEM89A2RUT3 159 aa2.05□□□□□ -2.08
C9orf72-205ENST00000488117 A6NDX4 124 aa2.05□□□□□ -2.08
C9orf72-205ENST00000488117 J3KRW8 73 aa2.05□□□□□ -2.08
C9orf72-205ENST00000488117 EREGO14944 169 aa2.05□□□□□ -2.08
C9orf72-205ENST00000488117 ATP5LO75964 103 aa2.05□□□□□ -2.08
C9orf72-205ENST00000488117 IGHV3-11P01762 117 aa2.05□□□□□ -2.08
C9orf72-205ENST00000488117 PRSS1P07477 247 aa2.05□□□□□ -2.08
C9orf72-205ENST00000488117 MGPP08493 103 aa2.05□□□□□ -2.08
C9orf72-205ENST00000488117 RNASE4P34096 147 aaKnown RBP2.05□□□□□ -2.08
C9orf72-205ENST00000488117 CRIP2P52943 208 aaPredicted RBP2.05□□□□□ -2.08
C9orf72-205ENST00000488117 MRPL51Q4U2R6 128 aaKnown RBP2.05□□□□□ -2.08
C9orf72-205ENST00000488117 CCDC140Q96MF4 163 aa2.05□□□□□ -2.08
C9orf72-205ENST00000488117 HEATR1Q9H583 2144 aaKnown RBP2.05□□□□□ -2.08
C9orf72-205ENST00000488117 DAZ1Q9NQZ3 744 aaKnown RBP2.05□□□□□ -2.08
C9orf72-205ENST00000488117 PEF1Q9UBV8 284 aaKnown RBP2.05□□□□□ -2.08
C9orf72-205ENST00000488117 TMEM213A2RRL7 107 aa2.05□□□□□ -2.08
C9orf72-205ENST00000488117 A6NDN8 102 aa2.05□□□□□ -2.08
C9orf72-205ENST00000488117 TGFAP01135 160 aa2.05□□□□□ -2.08
C9orf72-205ENST00000488117 IGHG2P01859 326 aa2.05□□□□□ -2.08
C9orf72-205ENST00000488117 IGF1P05019 195 aa2.05□□□□□ -2.08
C9orf72-205ENST00000488117 IGLC3P0DOY3 106 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms