RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TMEM8BA6NDV4 472 aa9.35□□□□□ -0.91
TRA2B-214ENST00000487615 HOXB4P17483 251 aaPredicted RBP9.35□□□□□ -0.91
TRA2B-214ENST00000487615 MRPL36Q9P0J6 103 aaKnown RBP9.35□□□□□ -0.91
TRA2B-214ENST00000487615 ANKRD11Q6UB99 2663 aaPredicted RBP9.35□□□□□ -0.91
TRA2B-214ENST00000487615 A8MWP6 167 aa9.35□□□□□ -0.91
TRA2B-214ENST00000487615 K7EIM0 57 aa9.35□□□□□ -0.91
TRA2B-214ENST00000487615 ASPHD1Q5U4P2 390 aa9.35□□□□□ -0.91
TRA2B-214ENST00000487615 OR4X2Q8NGF9 303 aa9.35□□□□□ -0.91
TRA2B-214ENST00000487615 CACNG7P62955 275 aa9.34□□□□□ -0.91
TRA2B-214ENST00000487615 SRSF9Q13242 221 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRA2B-214ENST00000487615 ZNF56Q15929 161 aa9.34□□□□□ -0.91
TRA2B-214ENST00000487615 NPBQ8NG41 125 aa9.34□□□□□ -0.91
TRA2B-214ENST00000487615 ZNF502Q8TBZ5 544 aa9.34□□□□□ -0.91
TRA2B-214ENST00000487615 GP9P14770 177 aa9.34□□□□□ -0.91
TRA2B-214ENST00000487615 IGFBPL1Q8WX77 278 aa9.34□□□□□ -0.91
TRA2B-214ENST00000487615 NCR2O95944 276 aa9.34□□□□□ -0.91
TRA2B-214ENST00000487615 RNF224P0DH78 156 aa9.34□□□□□ -0.91
TRA2B-214ENST00000487615 SLC25A16P16260 332 aa9.34□□□□□ -0.91
TRA2B-214ENST00000487615 LEPP41159 167 aa9.34□□□□□ -0.91
TRA2B-214ENST00000487615 PLP1P60201 277 aa9.34□□□□□ -0.91
TRA2B-214ENST00000487615 POLR3KQ9Y2Y1 108 aaPredicted RBP9.34□□□□□ -0.91
TRA2B-214ENST00000487615 TEX22C9J3V5 150 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 H3BVH4 76 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 J3QR89 54 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 LTAP01374 205 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 RAX2Q96IS3 184 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 CBY1Q9Y3M2 126 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 PRRC2CQ9Y520 2896 aaKnown RBP9.33□□□□□ -0.92
TRA2B-214ENST00000487615 AMN1Q8IY45 258 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 FOXC2Q99958 501 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 TMEM160Q9NX00 188 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 CSPG4Q6UVK1 2322 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 PSMG4Q5JS54 123 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 Q6ZWC4 215 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 C8orf49Q96NF6 230 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 ALKBH7Q9BT30 221 aaPredicted RBP9.33□□□□□ -0.92
TRA2B-214ENST00000487615 SNAI2O43623 268 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 SRD5A1P18405 259 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 IFI27L1Q96BM0 104 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 C17orf77Q96MU5 243 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 ST20Q9HBF5 79 aa9.33□□□□□ -0.92
TRA2B-214ENST00000487615 EVI2AP22794 236 aa9.32□□□□□ -0.92
TRA2B-214ENST00000487615 GCSHP23434 173 aa9.32□□□□□ -0.92
TRA2B-214ENST00000487615 FAM120AOSQ5T036 256 aa9.32□□□□□ -0.92
TRA2B-214ENST00000487615 DTX2Q86UW9 622 aa9.32□□□□□ -0.92
TRA2B-214ENST00000487615 Q8N7P7 452 aa9.32□□□□□ -0.92
TRA2B-214ENST00000487615 PRR25Q96S07 402 aa9.32□□□□□ -0.92
TRA2B-214ENST00000487615 SMAD7O15105 426 aaKnown RBP9.32□□□□□ -0.92
TRA2B-214ENST00000487615 ERCC8Q13216 396 aa9.32□□□□□ -0.92
TRA2B-214ENST00000487615 ZC2HC1AQ96GY0 325 aa9.32□□□□□ -0.92
TRA2B-214ENST00000487615 LINC00477Q96M19 166 aa9.32□□□□□ -0.92
TRA2B-214ENST00000487615 NAV3Q8IVL0 2385 aa9.32□□□□□ -0.92
TRA2B-214ENST00000487615 CRYGCP07315 174 aa9.32□□□□□ -0.92
TRA2B-214ENST00000487615 FOSL1P15407 271 aa9.32□□□□□ -0.92
TRA2B-214ENST00000487615 GATA3P23771 443 aa9.32□□□□□ -0.92
TRA2B-214ENST00000487615 SYS1-DBNDD2H3BUS1 97 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 CD7P09564 240 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 RNF182Q8N6D2 247 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 IGF2BP2-AS1Q96M15 143 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 DOPEY2Q9Y3R5 2298 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 DSCAMO60469 2012 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 IGLV11-55A0A075B6I3 123 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 Q1RN00 199 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 SCGB3A1Q96QR1 104 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 LINC00469Q8N7U9 141 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 ZNF503Q96F45 646 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 C20orf144Q9BQM9 153 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 RHPN1-AS1Q9BWJ2 59 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 IGHV7-81A0A0B4J1V7 117 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.31□□□□□ -0.92
TRA2B-214ENST00000487615 CDPF1Q6NVV7 123 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 LINC01356Q8N9X3 169 aa9.31□□□□□ -0.92
TRA2B-214ENST00000487615 OR11H12B2RN74 326 aa9.3□□□□□ -0.92
TRA2B-214ENST00000487615 HAX1O00165 279 aa9.3□□□□□ -0.92
TRA2B-214ENST00000487615 OR11H1Q8NG94 326 aa9.3□□□□□ -0.92
TRA2B-214ENST00000487615 OR11H2Q8NH07 326 aa9.3□□□□□ -0.92
TRA2B-214ENST00000487615 WIPF2Q8TF74 440 aaPredicted RBP9.3□□□□□ -0.92
TRA2B-214ENST00000487615 IGKV1D-37A0A075B6S9 117 aa9.3□□□□□ -0.92
TRA2B-214ENST00000487615 TMEM213A2RRL7 107 aa9.3□□□□□ -0.92
TRA2B-214ENST00000487615 NPIPB6E9PJ23 425 aa9.3□□□□□ -0.92
TRA2B-214ENST00000487615 OVOL3O00110 214 aa9.3□□□□□ -0.92
TRA2B-214ENST00000487615 DAZ1Q9NQZ3 744 aaKnown RBP9.3□□□□□ -0.92
TRA2B-214ENST00000487615 SELENOKQ9Y6D0 94 aa9.3□□□□□ -0.92
TRA2B-214ENST00000487615 TRAV8-6A0A0B4J262 113 aa9.3□□□□□ -0.92
TRA2B-214ENST00000487615 PSMB11A5LHX3 300 aa9.3□□□□□ -0.92
TRA2B-214ENST00000487615 SCGB1C2P0DMR2 95 aa9.3□□□□□ -0.92
TRA2B-214ENST00000487615 IGHV3OR16-12A0A075B7B8 117 aa9.29□□□□□ -0.92
TRA2B-214ENST00000487615 CENPVL3A0A0U1RRI6 287 aa9.29□□□□□ -0.92
TRA2B-214ENST00000487615 DUSP14O95147 198 aaKnown RBP9.29□□□□□ -0.92
TRA2B-214ENST00000487615 NDUFA3O95167 84 aa9.29□□□□□ -0.92
TRA2B-214ENST00000487615 RCHY1Q96PM5 261 aa9.29□□□□□ -0.92
TRA2B-214ENST00000487615 MS4A6AQ9H2W1 248 aa9.29□□□□□ -0.92
TRA2B-214ENST00000487615 TNRC6BQ9UPQ9 1833 aaKnown RBP9.29□□□□□ -0.92
TRA2B-214ENST00000487615 GAGE10A6NGK3 116 aa9.29□□□□□ -0.92
TRA2B-214ENST00000487615 SRSF1Q07955 248 aaKnown RBP eCLIP9.29□□□□□ -0.926e-8■□□□□ 10.3
TRA2B-214ENST00000487615 LDLRAD2Q5SZI1 272 aa9.29□□□□□ -0.92
TRA2B-214ENST00000487615 LYRM7Q5U5X0 104 aa9.29□□□□□ -0.92
TRA2B-214ENST00000487615 C2orf88Q9BSF0 95 aa9.29□□□□□ -0.92
TRA2B-214ENST00000487615 FSTL3O95633 263 aa9.29□□□□□ -0.92
TRA2B-214ENST00000487615 ITLN2Q8WWU7 325 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms