RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 HIVEP3Q5T1R4 2406 aa20.34■□□□□ 0.85
HLA-C-208ENST00000487245 OR2T8A6NH00 312 aa20.34■□□□□ 0.85
HLA-C-208ENST00000487245 PET117Q6UWS5 81 aa20.34■□□□□ 0.85
HLA-C-208ENST00000487245 ST20Q9HBF5 79 aa20.34■□□□□ 0.85
HLA-C-208ENST00000487245 OR4C46A6NHA9 309 aa20.33■□□□□ 0.85
HLA-C-208ENST00000487245 UNQ5815/PRO19632Q6UWF5 114 aa20.33■□□□□ 0.85
HLA-C-208ENST00000487245 TMUB1Q9BVT8 246 aa20.33■□□□□ 0.84
HLA-C-208ENST00000487245 SAPCD1Q5SSQ6 148 aa20.32■□□□□ 0.84
HLA-C-208ENST00000487245 STPG4Q8N801 248 aa20.32■□□□□ 0.84
HLA-C-208ENST00000487245 C8orf49Q96NF6 230 aa20.32■□□□□ 0.84
HLA-C-208ENST00000487245 HSPB8Q9UJY1 196 aa20.32■□□□□ 0.84
HLA-C-208ENST00000487245 HRNRQ86YZ3 2850 aaPredicted RBP20.32■□□□□ 0.84
HLA-C-208ENST00000487245 CENPVL3A0A0U1RRI6 287 aa20.31■□□□□ 0.84
HLA-C-208ENST00000487245 IGHV3-23P01764 117 aa20.31■□□□□ 0.84
HLA-C-208ENST00000487245 LINC00173Q6ZV60 143 aa20.31■□□□□ 0.84
HLA-C-208ENST00000487245 TMEM191AQ9H0A3 160 aa20.31■□□□□ 0.84
HLA-C-208ENST00000487245 GOLT1BQ9Y3E0 138 aa20.31■□□□□ 0.84
HLA-C-208ENST00000487245 ZNF502Q8TBZ5 544 aa20.3■□□□□ 0.84
HLA-C-208ENST00000487245 LRBAP50851 2863 aa20.3■□□□□ 0.84
HLA-C-208ENST00000487245 TMEM8BA6NDV4 472 aa20.3■□□□□ 0.84
HLA-C-208ENST00000487245 IGHV4-39P01824 125 aa20.3■□□□□ 0.84
HLA-C-208ENST00000487245 MAP1LC3CQ9BXW4 147 aa20.3■□□□□ 0.84
HLA-C-208ENST00000487245 RAB9AP51151 201 aa20.29■□□□□ 0.84
HLA-C-208ENST00000487245 U3KQK5 164 aa20.29■□□□□ 0.84
HLA-C-208ENST00000487245 SPTBN1Q01082 2364 aaKnown RBP20.29■□□□□ 0.84
HLA-C-208ENST00000487245 TMEM189A5PLL7 270 aa20.28■□□□□ 0.84
HLA-C-208ENST00000487245 SH2D1AO60880 128 aa20.28■□□□□ 0.84
HLA-C-208ENST00000487245 PAX8Q06710 450 aa20.28■□□□□ 0.84
HLA-C-208ENST00000487245 ASCL2Q99929 193 aa20.28■□□□□ 0.84
HLA-C-208ENST00000487245 ATP6V0E1O15342 81 aa20.28■□□□□ 0.84
HLA-C-208ENST00000487245 ECSCRQ19T08 205 aa20.28■□□□□ 0.84
HLA-C-208ENST00000487245 TFPI2P48307 235 aa20.27■□□□□ 0.84
HLA-C-208ENST00000487245 RPS20P60866 119 aaKnown RBP20.27■□□□□ 0.84
HLA-C-208ENST00000487245 SRSF2Q01130 221 aaKnown RBP20.27■□□□□ 0.84
HLA-C-208ENST00000487245 C15orf32Q32M92 178 aa20.27■□□□□ 0.84
HLA-C-208ENST00000487245 PIMREGQ9BSJ6 248 aa20.27■□□□□ 0.84
HLA-C-208ENST00000487245 RHOGP84095 191 aa20.26■□□□□ 0.83
HLA-C-208ENST00000487245 PIP4P2Q8N4L2 257 aa20.26■□□□□ 0.83
HLA-C-208ENST00000487245 PRR25Q96S07 402 aa20.26■□□□□ 0.83
HLA-C-208ENST00000487245 AP5S1Q9NUS5 200 aa20.26■□□□□ 0.83
HLA-C-208ENST00000487245 ZNF138P52744 262 aa20.26■□□□□ 0.83
HLA-C-208ENST00000487245 SMAD5-AS1Q9Y6J3 95 aa20.26■□□□□ 0.83
HLA-C-208ENST00000487245 FOSL1P15407 271 aa20.25■□□□□ 0.83
HLA-C-208ENST00000487245 LYZL1Q6UWQ5 148 aa20.25■□□□□ 0.83
HLA-C-208ENST00000487245 CHD8Q9HCK8 2581 aa20.25■□□□□ 0.83
HLA-C-208ENST00000487245 ZZEF1O43149 2961 aa20.25■□□□□ 0.83
HLA-C-208ENST00000487245 DCHS2Q6V1P9 2916 aa20.24■□□□□ 0.83
HLA-C-208ENST00000487245 LINC01545Q5VT33 79 aa20.24■□□□□ 0.83
HLA-C-208ENST00000487245 NPSP0C0P6 89 aa20.24■□□□□ 0.83
HLA-C-208ENST00000487245 GPR183P32249 361 aa20.24■□□□□ 0.83
HLA-C-208ENST00000487245 RELQ04864 619 aaPredicted RBP20.24■□□□□ 0.83
HLA-C-208ENST00000487245 FAM104BQ5XKR9 115 aa20.24■□□□□ 0.83
HLA-C-208ENST00000487245 C5orf56Q8N8D9 126 aa20.24■□□□□ 0.83
HLA-C-208ENST00000487245 EEF1AKMT3Q96AZ1 226 aa20.24■□□□□ 0.83
HLA-C-208ENST00000487245 MS4A6AQ9H2W1 248 aa20.24■□□□□ 0.83
HLA-C-208ENST00000487245 IGKV2-40A0A087WW87 121 aaPredicted RBP20.23■□□□□ 0.83
HLA-C-208ENST00000487245 A0A087X0K7 114 aa20.23■□□□□ 0.83
HLA-C-208ENST00000487245 NDUFS8O00217 210 aa20.23■□□□□ 0.83
HLA-C-208ENST00000487245 IGKV2D-40P01614 121 aaPredicted RBP20.23■□□□□ 0.83
HLA-C-208ENST00000487245 FA2HQ7L5A8 372 aa20.23■□□□□ 0.83
HLA-C-208ENST00000487245 ORAOV1Q8WV07 137 aa20.23■□□□□ 0.83
HLA-C-208ENST00000487245 WNK2Q9Y3S1 2297 aa20.23■□□□□ 0.83
HLA-C-208ENST00000487245 TRBV7-1A0A0A6YYK4 115 aa20.22■□□□□ 0.83
HLA-C-208ENST00000487245 IGHG4P01861 327 aa20.22■□□□□ 0.83
HLA-C-208ENST00000487245 BMI1P35226 326 aa20.22■□□□□ 0.83
HLA-C-208ENST00000487245 IGHV1-69DA0A0B4J2H0 117 aa20.22■□□□□ 0.83
HLA-C-208ENST00000487245 IGHV1-69P01742 117 aa20.22■□□□□ 0.83
HLA-C-208ENST00000487245 CLEC3BP05452 202 aa20.22■□□□□ 0.83
HLA-C-208ENST00000487245 CSN3P07498 182 aa20.22■□□□□ 0.83
HLA-C-208ENST00000487245 OR10AG1Q8NH19 301 aa20.22■□□□□ 0.83
HLA-C-208ENST00000487245 ATP6V0BQ99437 205 aa20.22■□□□□ 0.83
HLA-C-208ENST00000487245 ZNF747Q9BV97 191 aa20.22■□□□□ 0.83
HLA-C-208ENST00000487245 MOB4Q9Y3A3 225 aa20.22■□□□□ 0.83
HLA-C-208ENST00000487245 HSBP1L1C9JCN9 74 aa20.21■□□□□ 0.83
HLA-C-208ENST00000487245 PRSS3P2Q8NHM4 247 aa20.21■□□□□ 0.83
HLA-C-208ENST00000487245 CCL19Q99731 98 aa20.21■□□□□ 0.83
HLA-C-208ENST00000487245 ZFAND3Q9H8U3 227 aa20.21■□□□□ 0.83
HLA-C-208ENST00000487245 HINT1P49773 126 aaPredicted RBP20.2■□□□□ 0.82
HLA-C-208ENST00000487245 TPPP3Q9BW30 176 aa20.2■□□□□ 0.82
HLA-C-208ENST00000487245 IGLC6P0CF74 106 aa20.2■□□□□ 0.82
HLA-C-208ENST00000487245 C10orf105Q8TEF2 133 aa20.2■□□□□ 0.82
HLA-C-208ENST00000487245 hDV102S1A0JD36 115 aa20.18■□□□□ 0.82
HLA-C-208ENST00000487245 TMEM213A2RRL7 107 aa20.18■□□□□ 0.82
HLA-C-208ENST00000487245 CRIP2P52943 208 aaPredicted RBP20.18■□□□□ 0.82
HLA-C-208ENST00000487245 ORMDL3Q8N138 153 aa20.18■□□□□ 0.82
HLA-C-208ENST00000487245 MEGF9Q9H1U4 602 aa20.18■□□□□ 0.82
HLA-C-208ENST00000487245 SCRT2Q9NQ03 307 aa20.18■□□□□ 0.82
HLA-C-208ENST00000487245 G3V318 75 aa20.18■□□□□ 0.82
HLA-C-208ENST00000487245 PRB4P10163 310 aaPredicted RBP20.18■□□□□ 0.82
HLA-C-208ENST00000487245 SLC25A34Q6PIV7 304 aa20.18■□□□□ 0.82
HLA-C-208ENST00000487245 PRELID3AQ96N28 172 aa20.18■□□□□ 0.82
HLA-C-208ENST00000487245 PSMG3-AS1Q96PY0 264 aa20.18■□□□□ 0.82
HLA-C-208ENST00000487245 VGLL1Q99990 258 aa20.18■□□□□ 0.82
HLA-C-208ENST00000487245 RBAKDNA6NC62 111 aa20.17■□□□□ 0.82
HLA-C-208ENST00000487245 BUB3O43684 328 aa20.17■□□□□ 0.82
HLA-C-208ENST00000487245 CCDC140Q96MF4 163 aa20.17■□□□□ 0.82
HLA-C-208ENST00000487245 TMSB15BA0A087X1C1 80 aa20.16■□□□□ 0.82
HLA-C-208ENST00000487245 D6R8Y8 96 aa20.16■□□□□ 0.82
HLA-C-208ENST00000487245 ATP5G2Q06055 141 aa20.16■□□□□ 0.82
HLA-C-208ENST00000487245 CLEC2AQ6UVW9 174 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms