RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 ROS1P08922 2347 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 DCHS2Q6V1P9 2916 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 DIRC3C9JPN6 131 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 SCGB1D1O95968 90 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 RAB4AP20338 218 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 GNLYP22749 145 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 SAA4P35542 130 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 CRIP2P52943 208 aaPredicted RBP5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 SLC35B1P78383 322 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 SRSF1Q07955 248 aaKnown RBP eCLIP5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 SLAQ13239 276 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 C21orf62-AS1Q17RA5 79 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 Q56UQ5 140 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 GOLT1AQ6ZVE7 132 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 CIARTQ8N365 385 aaPredicted RBP5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 C18orf32Q8TCD1 76 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 GTSF1Q8WW33 167 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 HSPB9Q9BQS6 159 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 ALKBH7Q9BT30 221 aaPredicted RBP5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 RABAC1Q9UI14 185 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 RPH3ALQ9UNE2 315 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 LRBAP50851 2863 aa5.49□□□□□ -1.53
SMARCAL1-212ENST00000486983 ZNF462Q96JM2 2506 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 A0A087X0K7 114 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 CENPVL3A0A0U1RRI6 287 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 A0A1W2PS18 150 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 VWC2LB2RUY7 222 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 F2Z2F3 143 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 C19orf84I3L1E1 186 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 NPFFO15130 113 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 SPINK4O60575 86 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 NDUFS7O75251 213 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 BRI3O95415 125 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 IGHV4-39P01824 125 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 APOHP02749 345 aaPredicted RBP5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 CTSGP08311 255 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 CD24P25063 80 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 CSN1S1P47710 185 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 UQCRFS1P47985 274 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 AMTP48728 403 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 PAX8Q06710 450 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 KLF17Q5JT82 389 aaPredicted RBP5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 GDF5OSQ5U4N7 250 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 LINC00322Q6ZN03 302 aaPredicted RBP5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 EXOC3-AS1Q8N2X6 119 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 ZNF502Q8TBZ5 544 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 RCHY1Q96PM5 261 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 C20orf144Q9BQM9 153 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 PIMREGQ9BSJ6 248 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 PSG8Q9UQ74 426 aa5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 HELZ2Q9BYK8 2649 aaKnown RBP5.48□□□□□ -1.53
SMARCAL1-212ENST00000486983 TRAV8-1A0A0A6YYK1 113 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 TRBV7-1A0A0A6YYK4 115 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 SH2D7A6NKC9 451 aaPredicted RBP5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 H3BTX0 84 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 ATP6V0E1O15342 81 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 SNRPCP09234 159 aaKnown RBP5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 CT45A10P0DMU9 189 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 SRSF2Q01130 221 aaKnown RBP5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 KIAA1644Q3SXP7 199 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 SAPCD1Q5SSQ6 148 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 TCF24Q7RTU0 167 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 PRNTQ86SH4 94 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 C5orf56Q8N8D9 126 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 OR2D3Q8NGH3 330 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 CHCHD1Q96BP2 118 aaKnown RBP5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 ZC2HC1AQ96GY0 325 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 CCDC140Q96MF4 163 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 C2orf88Q9BSF0 95 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 NDFIP1Q9BT67 221 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 PRO1933Q9H354 126 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 NRN1Q9NPD7 142 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 MOB4Q9Y3A3 225 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 PCNX1Q96RV3 2341 aa5.47□□□□□ -1.53
SMARCAL1-212ENST00000486983 CFAP46Q8IYW2 2715 aa5.46□□□□□ -1.53
SMARCAL1-212ENST00000486983 A0A1B0GUT8 65 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 RBAKDNA6NC62 111 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 OR2T8A6NH00 312 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 FAM223BA6NKX1 122 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 ZNF785A8K8V0 405 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 ZNF705FA8MVS1 300 aaPredicted RBP5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 H3BUA1 57 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 ZNF705DP0CH99 300 aaPredicted RBP5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 ZNF705BP0CI00 300 aaPredicted RBP5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 PMCHP20382 165 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 CAMPP49913 170 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 RPS20P60866 119 aaKnown RBP5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 RELQ04864 619 aaPredicted RBP5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 RIGQ13278 110 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 C15orf32Q32M92 178 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 C19orf54Q5BKX5 351 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 FAM120AOSQ5T036 256 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 UNQ5815/PRO19632Q6UWF5 114 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 NIT1Q86X76 327 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 FAM223AQ8IWN6 122 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 Q8N976 141 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 C10orf105Q8TEF2 133 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 EEF1AKMT3Q96AZ1 226 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 MRPL53Q96EL3 112 aaKnown RBP5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 SGK494Q96LW2 274 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms