RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 TNXAQ16473 311 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 Q6AWC8 147 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 MOB3BQ86TA1 216 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 LYPD1Q8N2G4 141 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 NUDT10Q8NFP7 164 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 C18orf32Q8TCD1 76 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 NUDT11Q96G61 164 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 ZNRD1Q9P1U0 126 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 FBXL7Q9UJT9 491 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 RNF114Q9Y508 228 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 SERTM2A0A1B0GWG4 89 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 PGPA6NDG6 321 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 SPINK4O60575 86 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 LINC00614P0C842 121 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 PYYP10082 97 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 ORM2P19652 201 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 BTF3P20290 206 aaKnown RBP7.08□□□□□ -1.28
COL12A1-208ENST00000486533 REG1BP48304 166 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 UBE2E1P51965 193 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 DLX6P56179 175 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 ZNF124Q15973 351 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 UTF1Q5T230 341 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 PRR27Q6MZM9 219 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 RBPMS2Q6ZRY4 209 aaKnown RBP7.08□□□□□ -1.28
COL12A1-208ENST00000486533 C1orf122Q6ZSJ8 110 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 NUP35Q8NFH5 326 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 FNDC4Q9H6D8 234 aaPredicted RBP7.08□□□□□ -1.28
COL12A1-208ENST00000486533 VPREB3Q9UKI3 123 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 F11RQ9Y624 299 aaKnown RBP7.08□□□□□ -1.28
COL12A1-208ENST00000486533 NOTCH1P46531 2555 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 IGKV1D-37A0A075B6S9 117 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 TRAV30A0A087WSZ9 112 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 TRAV5A0A0B4J249 113 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 IGLC7A0M8Q6 106 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 HIGD1CA8MV81 97 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 CHEK1O14757 476 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 LTAP01374 205 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 NTF3P20783 257 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 CEACAM3P40198 252 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 PATE2Q6UY27 113 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 NHLRC2Q8NBF2 726 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 OR4F17Q8NGA8 305 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 LINC01006Q8NI28 216 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 RPEQ96AT9 228 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 RASL11BQ9BPW5 248 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 PPP1R14DQ9NXH3 145 aa7.08□□□□□ -1.28
COL12A1-208ENST00000486533 TRAV9-2A0A087WT02 112 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 IGHV2-26A0A0B4J1V2 119 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 A0A1B0GXF2 115 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 HSBP1L1C9JCN9 74 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 TCRAP04437 139 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 C3orf79P0CE67 100 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 GP9P14770 177 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 ZNF25P17030 456 aaPredicted RBP7.07□□□□□ -1.28
COL12A1-208ENST00000486533 RIGQ13278 110 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 PLGLAQ15195 96 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 KIAA1644Q3SXP7 199 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 RNASEKQ6P5S7 137 aaKnown RBP7.07□□□□□ -1.28
COL12A1-208ENST00000486533 Q6ZN92 141 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 Q6ZSV7 163 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 PPP1R27Q86WC6 154 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 BPIFA4PQ86YQ2 179 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 BLNKQ8WV28 456 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 ALKBH7Q9BT30 221 aaPredicted RBP7.07□□□□□ -1.28
COL12A1-208ENST00000486533 Q9H3A6 140 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 ZFP30Q9Y2G7 519 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 SIGLEC9Q9Y336 463 aa7.07□□□□□ -1.28
COL12A1-208ENST00000486533 MRPS16Q9Y3D3 137 aaKnown RBP7.07□□□□□ -1.28
COL12A1-208ENST00000486533 IGHV1-3A0A0C4DH29 117 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 CGB1A6NKQ9 187 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 H3BUX3 64 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 DLEU1O43261 78 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 MOSP00540 346 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 CRYGBP07316 175 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 COX7A1P24310 79 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 CTRLP40313 264 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 SLC35B1P78383 322 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 SLAQ13239 276 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 MLANAQ16655 118 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 Q86TA4 180 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 NIT1Q86X76 327 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 ARL6IP6Q8N6S5 226 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 CITED1Q99966 193 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 TMEM70Q9BUB7 260 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 KRTAP9-2Q9BYQ4 174 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 PRSS22Q9GZN4 317 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 TMEM191AQ9H0A3 160 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 HSPB8Q9UJY1 196 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 GOLT1BQ9Y3E0 138 aa7.06□□□□□ -1.28
COL12A1-208ENST00000486533 TGP01266 2768 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 F2Z2F3 143 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 BUB1B-PAK6H3BSN5 160 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 M0QZ24 198 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 TIMM23O14925 209 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 IGLC2P0DOY2 106 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 IGLC3P0DOY3 106 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 CAMPP49913 170 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 PROK1P58294 105 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 KRTAP10-3P60369 221 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 LYZP61626 148 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms