RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 HOXA5P20719 270 aa13.37□□□□□ -0.27
COL27A1-205ENST00000485397 CCDC28AQ8IWP9 274 aa13.37□□□□□ -0.27
COL27A1-205ENST00000485397 GNPNAT1Q96EK6 184 aaPredicted RBP13.37□□□□□ -0.27
COL27A1-205ENST00000485397 SAT2Q96F10 170 aaPredicted RBP13.37□□□□□ -0.27
COL27A1-205ENST00000485397 Q9H8V8 135 aa13.37□□□□□ -0.27
COL27A1-205ENST00000485397 GAGE12BA1L429 117 aa13.36□□□□□ -0.27
COL27A1-205ENST00000485397 L7N2F9 121 aa13.36□□□□□ -0.27
COL27A1-205ENST00000485397 GAGE7O76087 117 aa13.36□□□□□ -0.27
COL27A1-205ENST00000485397 GAGE12FP0CL80 117 aa13.36□□□□□ -0.27
COL27A1-205ENST00000485397 GAGE12GP0CL81 117 aa13.36□□□□□ -0.27
COL27A1-205ENST00000485397 GAGE12IP0CL82 117 aa13.36□□□□□ -0.27
COL27A1-205ENST00000485397 CT45A10P0DMU9 189 aa13.36□□□□□ -0.27
COL27A1-205ENST00000485397 CAMLGP49069 296 aa13.36□□□□□ -0.27
COL27A1-205ENST00000485397 VAMP2P63027 116 aa13.36□□□□□ -0.27
COL27A1-205ENST00000485397 MIC13Q5XKP0 118 aa13.36□□□□□ -0.27
COL27A1-205ENST00000485397 RXFP4Q8TDU9 374 aa13.36□□□□□ -0.27
COL27A1-205ENST00000485397 DNAJC4Q9NNZ3 241 aa13.36□□□□□ -0.27
COL27A1-205ENST00000485397 LSM5Q9Y4Y9 91 aaKnown RBP13.36□□□□□ -0.27
COL27A1-205ENST00000485397 PXMP4Q9Y6I8 212 aa13.36□□□□□ -0.27
COL27A1-205ENST00000485397 ZNF701M0R085 212 aaPredicted RBP13.35□□□□□ -0.27
COL27A1-205ENST00000485397 IL7P13232 177 aa13.35□□□□□ -0.27
COL27A1-205ENST00000485397 M6PRP20645 277 aa13.35□□□□□ -0.27
COL27A1-205ENST00000485397 BCAP31P51572 246 aa13.35□□□□□ -0.27
COL27A1-205ENST00000485397 NRARPQ7Z6K4 114 aa13.35□□□□□ -0.27
COL27A1-205ENST00000485397 KRTAP1-5Q9BYS1 174 aa13.35□□□□□ -0.27
COL27A1-205ENST00000485397 TRAV12-3A0A0B4J271 114 aa13.34□□□□□ -0.27
COL27A1-205ENST00000485397 CST7O76096 145 aa13.34□□□□□ -0.27
COL27A1-205ENST00000485397 RLN2P04090 185 aa13.34□□□□□ -0.27
COL27A1-205ENST00000485397 Q6ZRG5 221 aa13.34□□□□□ -0.27
COL27A1-205ENST00000485397 ZNF431Q8TF32 576 aaPredicted RBP13.34□□□□□ -0.27
COL27A1-205ENST00000485397 FAM24AA6NFZ4 105 aa13.33□□□□□ -0.28
COL27A1-205ENST00000485397 FAM25EA8MYX2 175 aa13.33□□□□□ -0.28
COL27A1-205ENST00000485397 SNURFLB1AK76 121 aa13.33□□□□□ -0.28
COL27A1-205ENST00000485397 CDK2AP2O75956 126 aa13.33□□□□□ -0.28
COL27A1-205ENST00000485397 LEPP41159 167 aa13.33□□□□□ -0.28
COL27A1-205ENST00000485397 CAV2P51636 162 aa13.33□□□□□ -0.28
COL27A1-205ENST00000485397 RAB31Q13636 194 aa13.33□□□□□ -0.28
COL27A1-205ENST00000485397 ZNF846Q147U1 533 aa13.33□□□□□ -0.28
COL27A1-205ENST00000485397 ESRGQ1W209 222 aa13.33□□□□□ -0.28
COL27A1-205ENST00000485397 ZNF503Q96F45 646 aa13.33□□□□□ -0.28
COL27A1-205ENST00000485397 C20orf85Q9H1P6 137 aa13.33□□□□□ -0.28
COL27A1-205ENST00000485397 C11orf1Q9H5F2 150 aa13.33□□□□□ -0.28
COL27A1-205ENST00000485397 ZNF586Q9NXT0 402 aa13.33□□□□□ -0.28
COL27A1-205ENST00000485397 NPIPB6E9PJ23 425 aa13.32□□□□□ -0.28
COL27A1-205ENST00000485397 PLA2G10O15496 165 aa13.32□□□□□ -0.28
COL27A1-205ENST00000485397 CNPY1Q3B7I2 92 aa13.32□□□□□ -0.28
COL27A1-205ENST00000485397 SPATA12Q7Z6I5 190 aa13.32□□□□□ -0.28
COL27A1-205ENST00000485397 ODF3Q96PU9 254 aa13.32□□□□□ -0.28
COL27A1-205ENST00000485397 WDR83OSQ9Y284 106 aa13.32□□□□□ -0.28
COL27A1-205ENST00000485397 APOBP04114 4563 aaKnown RBP13.31□□□□□ -0.28
COL27A1-205ENST00000485397 GUK1Q16774 197 aa13.31□□□□□ -0.28
COL27A1-205ENST00000485397 Q6ZTI0 123 aa13.31□□□□□ -0.28
COL27A1-205ENST00000485397 MAPKAPK5-AS1Q8N8E1 139 aa13.31□□□□□ -0.28
COL27A1-205ENST00000485397 OR1L4Q8NGR5 311 aa13.31□□□□□ -0.28
COL27A1-205ENST00000485397 SEC22CQ9BRL7 303 aa13.31□□□□□ -0.28
COL27A1-205ENST00000485397 TMPRSS5Q9H3S3 457 aa13.31□□□□□ -0.28
COL27A1-205ENST00000485397 UQCC1Q9NVA1 299 aa13.31□□□□□ -0.28
COL27A1-205ENST00000485397 TRAV6A0A075B6T7 132 aa13.3□□□□□ -0.28
COL27A1-205ENST00000485397 C5orf51A6NDU8 294 aa13.3□□□□□ -0.28
COL27A1-205ENST00000485397 M0R3E3 92 aa13.3□□□□□ -0.28
COL27A1-205ENST00000485397 ERCC8Q13216 396 aa13.3□□□□□ -0.28
COL27A1-205ENST00000485397 TTC32Q5I0X7 151 aa13.3□□□□□ -0.28
COL27A1-205ENST00000485397 PYGO2Q9BRQ0 406 aa13.3□□□□□ -0.28
COL27A1-205ENST00000485397 UPK3BQ9BT76 320 aa13.3□□□□□ -0.28
COL27A1-205ENST00000485397 Q9H3A6 140 aa13.3□□□□□ -0.28
COL27A1-205ENST00000485397 DNAH5Q8TE73 4624 aa13.29□□□□□ -0.28
COL27A1-205ENST00000485397 DAZ2Q13117 558 aaKnown RBP13.29□□□□□ -0.28
COL27A1-205ENST00000485397 VWC2Q2TAL6 325 aa13.29□□□□□ -0.28
COL27A1-205ENST00000485397 PFDN5Q99471 154 aa13.29□□□□□ -0.28
COL27A1-205ENST00000485397 SLC39A9Q9NUM3 307 aa13.29□□□□□ -0.28
COL27A1-205ENST00000485397 MRPS16Q9Y3D3 137 aaKnown RBP13.29□□□□□ -0.28
COL27A1-205ENST00000485397 UBE2L5PA0A1B0GUS4 154 aa13.28□□□□□ -0.28
COL27A1-205ENST00000485397 H3BNG1 76 aa13.28□□□□□ -0.28
COL27A1-205ENST00000485397 LYRM1O43325 122 aa13.28□□□□□ -0.28
COL27A1-205ENST00000485397 ZNF253O75346 499 aa13.28□□□□□ -0.28
COL27A1-205ENST00000485397 TCRBP04435 133 aa13.28□□□□□ -0.28
COL27A1-205ENST00000485397 RPL29P47914 159 aaKnown RBP13.28□□□□□ -0.28
COL27A1-205ENST00000485397 BAXQ07812 192 aa13.28□□□□□ -0.28
COL27A1-205ENST00000485397 C2orf50Q96LR7 162 aa13.28□□□□□ -0.28
COL27A1-205ENST00000485397 GSN-AS1Q9NRJ2 163 aa13.28□□□□□ -0.28
COL27A1-205ENST00000485397 TRBV19A0A075B6N1 114 aa13.27□□□□□ -0.29
COL27A1-205ENST00000485397 IGSF23A1L1A6 192 aa13.27□□□□□ -0.29
COL27A1-205ENST00000485397 NDUFB4O95168 129 aa13.27□□□□□ -0.29
COL27A1-205ENST00000485397 SLC25A5P05141 298 aaKnown RBP13.27□□□□□ -0.29
COL27A1-205ENST00000485397 C12orf45Q8N5I9 185 aaPredicted RBP13.27□□□□□ -0.29
COL27A1-205ENST00000485397 C11orf72Q8NBR9 251 aa13.27□□□□□ -0.29
COL27A1-205ENST00000485397 MRPL53Q96EL3 112 aaKnown RBP13.27□□□□□ -0.29
COL27A1-205ENST00000485397 VSIG2Q96IQ7 327 aa13.27□□□□□ -0.29
COL27A1-205ENST00000485397 A0A096LPF7 62 aa13.26□□□□□ -0.29
COL27A1-205ENST00000485397 C7orf71A4D174 169 aa13.26□□□□□ -0.29
COL27A1-205ENST00000485397 PVALBP20472 110 aaPredicted RBP13.26□□□□□ -0.29
COL27A1-205ENST00000485397 SULT1A1P50225 295 aa13.26□□□□□ -0.29
COL27A1-205ENST00000485397 KRTAP10-2P60368 255 aa13.26□□□□□ -0.29
COL27A1-205ENST00000485397 S100A10P60903 97 aa13.26□□□□□ -0.29
COL27A1-205ENST00000485397 CD300CQ08708 224 aa13.26□□□□□ -0.29
COL27A1-205ENST00000485397 BTN1A1Q13410 526 aa13.26□□□□□ -0.29
COL27A1-205ENST00000485397 TMEM252Q8N6L7 170 aa13.26□□□□□ -0.29
COL27A1-205ENST00000485397 AGPAT4-IT1Q9H0P7 198 aa13.26□□□□□ -0.29
COL27A1-205ENST00000485397 LYRM2Q9NU23 88 aaPredicted RBP13.26□□□□□ -0.29
COL27A1-205ENST00000485397 TRGV2A0A075B6R0 118 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms