RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 INSL3P51460 131 aa0.24□□□□□ -2.37
SCAF11-207ENST00000484275 TMBIM6P55061 237 aa0.24□□□□□ -2.37
SCAF11-207ENST00000484275 FOXA3P55318 350 aaPredicted RBP0.24□□□□□ -2.37
SCAF11-207ENST00000484275 HACD4Q5VWC8 232 aa0.24□□□□□ -2.37
SCAF11-207ENST00000484275 LINC00299Q6ZSB3 139 aa0.24□□□□□ -2.37
SCAF11-207ENST00000484275 GPX7Q96SL4 187 aaPredicted RBP0.24□□□□□ -2.37
SCAF11-207ENST00000484275 PAIP2Q9BPZ3 127 aaKnown RBP0.24□□□□□ -2.37
SCAF11-207ENST00000484275 OR2H1Q9GZK4 316 aa0.24□□□□□ -2.37
SCAF11-207ENST00000484275 RNF11Q9Y3C5 154 aa0.24□□□□□ -2.37
SCAF11-207ENST00000484275 PBRM1Q86U86 1689 aa0.24□□□□□ -2.37
SCAF11-207ENST00000484275 TCOF1Q13428 1488 aaKnown RBP0.23□□□□□ -2.37
SCAF11-207ENST00000484275 TECPR2O15040 1411 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 TRAPPC8Q9Y2L5 1435 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 XIRP1Q702N8 1843 aaKnown RBP0.23□□□□□ -2.37
SCAF11-207ENST00000484275 K7ERJ3 54 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 RER1O15258 196 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 PIAS1O75925 651 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 PPP1R2P41236 205 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 RPL35P42766 123 aaKnown RBP0.23□□□□□ -2.37
SCAF11-207ENST00000484275 TCTAP57738 103 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 GNG3P63215 75 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 EIF3IQ13347 325 aaKnown RBP0.23□□□□□ -2.37
SCAF11-207ENST00000484275 CIRBPQ14011 172 aaKnown RBP0.23□□□□□ -2.37
SCAF11-207ENST00000484275 SNCBQ16143 134 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 SPINK9Q5DT21 86 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 C1orf140Q5VVS0 124 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 LYG2Q86SG7 212 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 CROCCP2Q86T23 111 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 FAM216BQ8N7L0 139 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 NEK7Q8TDX7 302 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 PLEKHB2Q96CS7 222 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 MCEEQ96PE7 176 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 WFDC10AQ9H1F0 79 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 NIT2Q9NQR4 276 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 SS18L2Q9UHA2 77 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 LAMTOR3Q9UHA4 124 aa0.23□□□□□ -2.37
SCAF11-207ENST00000484275 PLXNA2O75051 1894 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 BCL9O00512 1426 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 BDP1A6H8Y1 2624 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 MED12Q93074 2177 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 MUC4Q99102 2169 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 NAV3Q8IVL0 2385 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 TRAV23DV6A0A075B6W5 121 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 A0A096LPI6 279 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 ODAMA1E959 279 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 C9orf170A2RU37 121 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 MFSD11O43934 449 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 CST7O76096 145 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 IGHV3-33P01772 117 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 CSN2P05814 226 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 IDO1P14902 403 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 FXYD6P3P58550 94 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 HBBP68871 147 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 BASP1P80723 227 aaKnown RBP0.22□□□□□ -2.37
SCAF11-207ENST00000484275 RTL8BQ17RB0 113 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 FKBP1CQ5VVH2 108 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 GLIPR1L1Q6UWM5 242 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 Q6ZS92 163 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 PHF5AQ7RTV0 110 aaKnown RBP0.22□□□□□ -2.37
SCAF11-207ENST00000484275 ATOH7Q8N100 152 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 AP3S1Q92572 193 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 CST11Q9H112 138 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 BIN3Q9NQY0 253 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 RBBP6Q7Z6E9 1792 aaKnown RBP0.22□□□□□ -2.37
SCAF11-207ENST00000484275 KIDINS220Q9ULH0 1771 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 DLEC1Q9Y238 1755 aa0.22□□□□□ -2.37
SCAF11-207ENST00000484275 RREB1Q92766 1687 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 WDR97A6NE52 1622 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 TRBV30A0A0K0K1B3 111 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 C5orf67F2Z3F1 127 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 H3BQV1 296 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 CD14P08571 375 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 TAS2R41P59536 307 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 RPL37AP61513 92 aaKnown RBP0.21□□□□□ -2.38
SCAF11-207ENST00000484275 MSMO1Q15800 293 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 FOXI2Q6ZQN5 318 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 Q6ZQY7 126 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 PRR15Q8IV56 129 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 SMIM20Q8N5G0 67 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 EFCAB11Q9BUY7 163 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 BOLA2Q9H3K6 86 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 JPT1Q9UK76 154 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 BOKQ9UMX3 212 aaPredicted RBP0.21□□□□□ -2.38
SCAF11-207ENST00000484275 TPRKBQ9Y3C4 175 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 ASB4Q9Y574 426 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 DLC1Q96QB1 1528 aa0.21□□□□□ -2.38
SCAF11-207ENST00000484275 NINQ8N4C6 2090 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 A0A0D9SG42 100 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 A0A0J9YY99 117 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 ZNF727A8MUV8 499 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 E5RI56 91 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 KPNA4O00629 521 aaPredicted RBP0.2□□□□□ -2.38
SCAF11-207ENST00000484275 CCL4P13236 92 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 FABP4P15090 132 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 PDE6GP18545 87 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 SERPINB1P30740 379 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 SPINT3P49223 89 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 ZNF137PP52743 207 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 MIR22HGQ0VDD5 57 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 CASC2Q6XLA1 102 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms